CSPI05G27210 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCCGTTGGGTTAAAGGATTGAGTCTCTTGCAGCATATCCGTAACTGCTTCTTCTTGCATTACTACGACGTTTGATGCAAATTAATCCTACAAATCCCAACAAACCTACTCCTATGATCACTCCAAATGCAATCCCTGCCTTTTGTCCCCCGCTCAATCCTTTTGAACCTCCACCACCCTTTTCCTTCAATGCTCCATTAGGCGTTGGCGACGGTGGTGGAGATGAACCCAAGTTAGGCGGCGGTGCAGGTGGTAAGTTAACAGTGGAATTAGGTGGTGGTGGTGGGGAGTTGGTTGTATTGGATGGGGGTGGGGGAGTGTCAGTTGCGTTGGATGGTGACGGTGGAGGCGGAGCGTCAGTGGTGTTGGCTGGTGGCGGTGGAGGCGGAGCGTCGGTGGCGTTGGATGGTGGCGGTGGAGGTGGAGCGTCGGTGGCGTTGGATGGTGGGGGTGGAGGTGGAGCGTAG ATCCGTTGGGTTAAAGGATTGAGTCTCTTGCAGCATATCCGTAACTGCTTCTTCTTGCATTACTACGACGTTTGATGCAAATTAATCCTACAAATCCCAACAAACCTACTCCTATGATCACTCCAAATGCAATCCCTGCCTTTTGTCCCCCGCTCAATCCTTTTGAACCTCCACCACCCTTTTCCTTCAATGCTCCATTAGGCGTTGGCGACGGTGGTGGAGATGAACCCAAGTTAGGCGGCGGTGCAGGTGGTAAGTTAACAGTGGAATTAGGTGGTGGTGGTGGGGAGTTGGTTGTATTGGATGGGGGTGGGGGAGTGTCAGTTGCGTTGGATGGTGACGGTGGAGGCGGAGCGTCAGTGGTGTTGGCTGGTGGCGGTGGAGGCGGAGCGTCGGTGGCGTTGGATGGTGGCGGTGGAGGTGGAGCGTCGGTGGCGTTGGATGGTGGGGGTGGAGGTGGAGCGTAG ATGCAAATTAATCCTACAAATCCCAACAAACCTACTCCTATGATCACTCCAAATGCAATCCCTGCCTTTTGTCCCCCGCTCAATCCTTTTGAACCTCCACCACCCTTTTCCTTCAATGCTCCATTAGGCGTTGGCGACGGTGGTGGAGATGAACCCAAGTTAGGCGGCGGTGCAGGTGGTAAGTTAACAGTGGAATTAGGTGGTGGTGGTGGGGAGTTGGTTGTATTGGATGGGGGTGGGGGAGTGTCAGTTGCGTTGGATGGTGACGGTGGAGGCGGAGCGTCAGTGGTGTTGGCTGGTGGCGGTGGAGGCGGAGCGTCGGTGGCGTTGGATGGTGGCGGTGGAGGTGGAGCGTCGGTGGCGTTGGATGGTGGGGGTGGAGGTGGAGCGTAG MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGGKLTVELGGGGGELVVLDGGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGASVALDGGGGGGA* Homology
BLAST of CSPI05G27210 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.8e-28 Identity = 86/129 (66.67%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CSPI05G27210 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 84/131 (64.12%), Postives = 89/131 (67.94%), Query Frame = 0
BLAST of CSPI05G27210 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 5.4e-10 Identity = 59/89 (66.29%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of CSPI05G27210 vs. ExPASy TrEMBL
Match: I1XA89 (Circumsporozoite protein (Fragment) OS=Plasmodium sp. VM71 OX=1178020 GN=CSP PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 51/94 (54.26%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of CSPI05G27210 vs. ExPASy TrEMBL
Match: A0A7K8R4S6 (K2C75 protein (Fragment) OS=Smithornis capensis OX=363769 GN=Krt75_1 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04 Identity = 52/95 (54.74%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CSPI05G27210 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus]) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CSPI05G27210 vs. NCBI nr
Match: KAE8648858.1 (hypothetical protein Csa_007747 [Cucumis sativus]) HSP 1 Score: 197.2 bits (500), Expect = 8.8e-47 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CSPI05G27210 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27 Identity = 86/129 (66.67%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CSPI05G27210 vs. NCBI nr
Match: XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.4 bits (324), Expect = 2.2e-26 Identity = 85/130 (65.38%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of CSPI05G27210 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23 Identity = 84/131 (64.12%), Postives = 89/131 (67.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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