CSPI05G27170 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G27170
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionV-type proton ATPase subunit G1
LocationChr5: 25782186 .. 25784685 (+)
RNA-Seq ExpressionCSPI05G27170
SyntenyCSPI05G27170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCTATGGCCTTCAACGAGAATCAGAGACTCTTTCAAGCACGCTTACATCAAAAAGCTGGAATGGAACCTCCACAGAATGAAAATCCAAAAGCATCAGCACCAATCTTCTAGCAAACAGAACTTGTTGGATAAAGAAGAAGCATCTGATGCTGCTGACGCCGTAACTTCAGAACCTTCCCCTTCAGTTTCTTTTGGTCAACGAGTTCTTGAATTCTTCTCAGAACTCTTTCATCTTCTTTCCTGTTGTTACTGCTGTTACTGCTGCGGAGGTGATTAATTTTTCTTTCCCCCCTTTTCAAAATCATCTTCTTATGAAACTCGACTTGCATATACAATTTTCGGATTAGGTCCTAACTTTAAGTTAAGGAGATGATTGATCTTGAATTTTGGGTTTAAAATGTCTATTTAATTTATTTTTTTACAAAAACTTAGTACCAACGGTGGATTTTTAATTGAAATGAAATGATCGCCCAGGAAAATAGAGGAAAATCCACACCGGTGTGGTATTGGCCACCAACACTCTAACAAAGAAATTAGTTATCGCTTAGAGAGTATAGAATTCCAGATGTATTTCAGTTGTCGAGAGCTCTCTTAGTTATATAGAACTAAGTTTCATAATGGCCCTTAGTTAATTAACTTTCGAGTACTTAATCAAGCCGTTACCAGCTGTGTAAATTATCGGATTGATTTCACTAATAACCCATACATGTACCAAAGTAGAACAACATAGTCTTTATCTTGGTAGAGTTGGCCTCCGTGCTTAGGTACTATGGCTTTATCGGATTGATTTCATAATGTGATCATTCCATTTCTTCCAAGAATTAATGTTCACGGTTGGTATCAAATTTCGGTACCAACATCTATGATAGCTTTAATAGCCTGGGGTTGAGAGTTTTGGTTGCATTTCGGTATTGTTAAGAGTATACCAAGAAGAATAAATTTGATATAGTTGGATTAAGTTGTTGAGCTGAATAGTGATCTAACATATAGAGAGCAGGAAGGCAAGTACAAACTGTTAGAATTAATGGGAATTCGCCCAGGAAAAGATTTACCCTAATTTGCTTTCCTTTTTTTTTTTTTGTTAAGCCTGTTGTCTATTTATTTTTCCCCTTTTGTATCTTGGATCGTGGTTTTCCTTTTGGTACTCAAGTTTGCATGTAACTCAGTGTCTATTTTCTTTTACCGGAATTGTTTTCTGATTAGTTCACCTGTTGGCTTTTGCTAAGTTTAGTTCACAAGTAAGAGTAATACAAATGCCATAGCTTGAAACTGATGTCATAGTTCTTAAAATTTAGTTTTGCGGTTTAGAGGGGAGGTTTTCATTGCTTCATGATGTTTCTTGCAGTTTTTCATTTGCAATCTAGTCTAGGGACTAGGAAGCTTTGAAGGCTTTAAATGATACGTTTTGAATAAAACTTAATTCGAAAAATTTGCATTGAAACAAGGACTTTGAGCATTCAAAAAGTTACTTCAAACAAGCTCTTAGTTTTCTGAAACGGAAAGGAGGAAAACATTGTCTAGTTCTTAGAAGTAGAAAATTTCCAACAGTGTCTTACTATTTTTTCTTGATTAAAGAGTTGTTTAAGATTCTATTCCTTCAATGAAGTTCCATCGTATACATGTTCGATGTCATGAACAATTGTCTATTGGGTAATAAAGTTTCTGTTGGGTTGATGGATTGCTAAAACATCTAGATCCTTTGAATCGTAATTACTAAACTATTACTAGATCTGACAACTTAAATTGATGCTTGTTGGTTTAAAAATCATATGAAACCCAACAAATGATTGCTAACATTATTGGAGAAGAATTTTAGTTGTTCAAAGTTTGAACTAAACTTTTTTGCTCAAATACCATGTTGAATTAGCACTTGACTTGATGAATACACACACACACATCATATATATTTTTTTATCCAGATGTTAATATTCCCAAGGGTCATGATACTTAAAGTTCGTTTTCTCTCTGATAGTTGAGAATGGTTCTTTTTTCATGATTCATCTGAGATGATTTCCTTCTTCTCAGATCTCTTTCAACTGGGTATTATAGTTTTTTTTAAACTAATTTGGTTATATTGCAAATTTGGTCCTACAGTTTGTAATTAGATTTTAGTCCATATGATTTGCAATTTAACCTACCAAAGCTTAAGGACTAAATTCTAACTTTCTCTATACCGTAGTTGCCAAATTTGCAATTTAACCCCATATTTGTTTGGCCTGCATAATTCATAACAATAACATTATATTATAACTCATACTGCAAAAATCTCGAGTTATCATTAACAGTTATTTCTTGAACTTGCATCTTTCATTAAGCACCCATTTGTGGCAAGCTAGAGACGGTTTTCTCGTTACATTCATTTTCTATTATGAAAATTTTATCCATTTTAAGGAATATAGAGAATTCACAATAGAAATGTTACAAACATTTGACATAAGCTCATGCTTGTGCAGCTTGCCTTCCCGACTAAGAACATTAATATTGATGAAGAATAG

mRNA sequence

ATGCATCTATGGCCTTCAACGAGAATCAGAGACTCTTTCAAGCACGCTTACATCAAAAAGCTGGAATGGAACCTCCACAGAATGAAAATCCAAAAGCATCAGCACCAATCTTCTAGCAAACAGAACTTGTTGGATAAAGAAGAAGCATCTGATGCTGCTGACGCCGTAACTTCAGAACCTTCCCCTTCAAACTCTTTCATCTTCTTTCCTGTTGTTACTGCTGTTACTGCTGCGGAGCTTGCCTTCCCGACTAAGAACATTAATATTGATGAAGAATAG

Coding sequence (CDS)

ATGCATCTATGGCCTTCAACGAGAATCAGAGACTCTTTCAAGCACGCTTACATCAAAAAGCTGGAATGGAACCTCCACAGAATGAAAATCCAAAAGCATCAGCACCAATCTTCTAGCAAACAGAACTTGTTGGATAAAGAAGAAGCATCTGATGCTGCTGACGCCGTAACTTCAGAACCTTCCCCTTCAAACTCTTTCATCTTCTTTCCTGTTGTTACTGCTGTTACTGCTGCGGAGCTTGCCTTCCCGACTAAGAACATTAATATTGATGAAGAATAG

Protein sequence

MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEPSPSNSFIFFPVVTAVTAAELAFPTKNINIDEE*
Homology
[Close]
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match: A0A0A0KRM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623370 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADA TSEP
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAETSEP 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match: A0A5A7SU31 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007460 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23
Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKE  SDAAD  TS+ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match: A0A5D3CBA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002720 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23
Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKE  SDAAD  TS+ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match: A0A6J1CC78 (uncharacterized protein LOC111010237 OS=Momordica charantia OX=3673 GN=LOC111010237 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK-HQHQSSSKQNLLDKEEASDAADAVTSE 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK  Q QSSSKQNLLDKE+ASD AD  T+E
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAE 60

Query: 61 PSPSNSF 67
           +   SF
Sbjct: 61 NTNLVSF 66

[Close]
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match: A0A6J1HPM3 (uncharacterized protein LOC111466560 OS=Cucurbita maxima OX=3661 GN=LOC111466560 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.1e-16
Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKH-QHQSSSKQNLLDKEEASDAADAVTSE 60
          MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+++SD AD  TS 
Sbjct: 1  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADVETSG 60

Query: 61 PSPSNSF 67
           S S SF
Sbjct: 61 KSSSISF 66

[Close]
BLAST of CSPI05G27170 vs. NCBI nr
Match: KAE8648857.1 (hypothetical protein Csa_008264 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-26
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADA TSEP
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAETSEP 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. NCBI nr
Match: KAA0034724.1 (hypothetical protein E6C27_scaffold65G007460 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKE  SDAAD  TS+ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. NCBI nr
Match: TYK09277.1 (hypothetical protein E5676_scaffold475G002720 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKEEASDAADAVTSEP 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKE  SDAAD  TS+ 
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKHQHQSSSKQNLLDKENVSDAADGETSDR 60

Query: 61 SPSNSF 67
          SPS SF
Sbjct: 61 SPSVSF 66

[Close]
BLAST of CSPI05G27170 vs. NCBI nr
Match: XP_022139281.1 (uncharacterized protein LOC111010237 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 8.8e-17
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK-HQHQSSSKQNLLDKEEASDAADAVTSE 60
          MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQK  Q QSSSKQNLLDKE+ASD AD  T+E
Sbjct: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKQQQQQSSSKQNLLDKEQASD-ADGETAE 60

Query: 61 PSPSNSF 67
           +   SF
Sbjct: 61 NTNLVSF 66

[Close]
BLAST of CSPI05G27170 vs. NCBI nr
Match: XP_022967037.1 (uncharacterized protein LOC111466560 [Cucurbita maxima])

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-16
Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0 

Query: 1  MHLWPSTRIRDSFKHAYIKKLEWNLHRMKIQKH-QHQSSSKQNLLDKEEASDAADAVTSE 60
          MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+++SD AD  TS 
Sbjct: 1  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADVETSG 60

Query: 61 PSPSNSF 67
           S S SF
Sbjct: 61 KSSSISF 66

The following BLAST results are available for this feature:
BLAST of CSPI05G27170 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G27170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRM01.7e-2696.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623370 PE=4 SV=1[more]
A0A5A7SU311.4e-2389.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CBA71.4e-2389.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CC784.2e-1780.60uncharacterized protein LOC111010237 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1HPM32.1e-1677.61uncharacterized protein LOC111466560 OS=Cucurbita maxima OX=3661 GN=LOC111466560... [more]
BLAST of CSPI05G27170 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648857.13.6e-2696.97hypothetical protein Csa_008264 [Cucumis sativus][more]
KAA0034724.12.8e-2389.39hypothetical protein E6C27_scaffold65G007460 [Cucumis melo var. makuwa][more]
TYK09277.12.8e-2389.39hypothetical protein E5676_scaffold475G002720 [Cucumis melo var. makuwa][more]
XP_022139281.18.8e-1780.60uncharacterized protein LOC111010237 [Momordica charantia][more]
XP_022967037.14.4e-1677.61uncharacterized protein LOC111466560 [Cucurbita maxima][more]
BLAST of CSPI05G27170 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..53
NoneNo IPR availablePANTHERPTHR37263EXPRESSED PROTEINcoord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G27170.1CSPI05G27170.1mRNA