CSPI05G27140 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G27140
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 25765517 .. 25766285 (-)
RNA-Seq ExpressionCSPI05G27140
SyntenyCSPI05G27140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCCTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTGTAAGTTTTCCCCTGTTTTCCTTTTGCAATCATTACCTCAACTCTCGGATCTTTGTTTTTATTTGAAGAAATATTTGACGCTATTACGGGAAGAAGAGGAAAAGAGAAATGTTGGTGGTTGGGATAGAAGTAGAATTGTGGTAAGAGTGTAATGTGATGGGGTCCAAAGAGAAAAGTATAGGACAGGGAGTTTAATAGATCGGTTGAGCTGGGTCTATGTTTTTTTTTTTTTTTTTTTCACTATGTAACATGCAATTTCTTCATGTTTGTTTCATTGTATGTGTTGTGGCTGTGCCTACTGGTTTGCTTAAGGCGACCATGGACGATTAGATTTGGAATTTTGCTTCTGACTATATTTTATTGAGATGTAGCTCTAAGCTGAAGAATGAGGGAGGCAATGAATCTGTCGTTTGATGCTGTGTTTTTTATATTATGCATCGAATGCACATTTTTTTTTCTATGCCTTTGTTATGAATCAATTTTCAGTTTATGAACTAGTGAATCAATTTGGAGATATCTTACTGACTGCAGTTCCCTTGATTTCTGTCCCCTGCAGACGTTTTCATTGTGTTAG

mRNA sequence

ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCCTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTACGTTTTCATTGTGTTAG

Coding sequence (CDS)

ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCCTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTACGTTTTCATTGTGTTAG

Protein sequence

MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVPIVVHCTFSLC*
Homology
[Close]
BLAST of CSPI05G27140 vs. ExPASy TrEMBL
Match: A0A0A0KRJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622850 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.6e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60
          MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP
Sbjct: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60

Query: 61 IVVHCTFSLC 71
          IVVHCTFSLC
Sbjct: 61 IVVHCTFSLC 70

[Close]
BLAST of CSPI05G27140 vs. NCBI nr
Match: KGN52270.1 (hypothetical protein Csa_009078 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 7.4e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60
          MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP
Sbjct: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60

Query: 61 IVVHCTFSLC 71
          IVVHCTFSLC
Sbjct: 61 IVVHCTFSLC 70

The following BLAST results are available for this feature:
BLAST of CSPI05G27140 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G27140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRJ73.6e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622850 PE=4 SV=1[more]
BLAST of CSPI05G27140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52270.17.4e-32100.00hypothetical protein Csa_009078 [Cucumis sativus][more]
BLAST of CSPI05G27140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G27140.1CSPI05G27140.1mRNA