CSPI05G25960 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G25960
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	inactive protein RESTRICTED TEV MOVEMENT 2
Location	Chr5: 25045190 .. 25045934 (-)
RNA-Seq Expression	CSPI05G25960
Synteny	CSPI05G25960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACGGCAAGGCCAGAGACCTCCGGACTCCGGGTTCCCTTCACTCCCAATGTTGAAAAAAGAGATGAAAACGAAGCCTACATTCTTCGCCTCCAACTTCCTGGTTCAAATTCTCCCCTTCTTTCTTTTTTGTTTTTTGATTCTCATCTGATCGTTTTTATTTTTTTGGTTTTTAGAATTCAAGAGGCAGCAAGTTACGGTTAGGGTTGAAGAAGGGAAACGAGTGATGAAGGTCACCGGAGAACGGCTGGCGGGGGACAATCGATGGTTCCGATTTGATGAAACTTTCCCAATTCCTGAAATTTGCGTAATCAACAAAATTTCTGTTCAATTAAAGAAGGGAGTTCTCTTCATTAGAATGATCAAACAAACCAACGGAACGGTGCCGGCGCCTCCGCCGCCCAAACAAAACGAGCAATTAACCCTAGAAAAGGGGAGAGAAGAAATCTCGGCACTGGATCAGAAAATTAGTAGCCCAGAGAAGGAAATTGAAAACAAAAAAGTAGAAAAGATGAAGGATTCGAAAACCGAGGATGTGGGTAAGATTAAAAACGAAGAAACCGCGAAGATCGGCACCGGGACTCCATATCCGAGAACGACAAGTGTTGGAAGGACGTCGGTACCGGCAATGGTAAGTCTAGCGGCGGCAGTTGTGATAGCCGTGGCGGCATATTTCATGTATCTTTTCTTAGTTCAAGAAGTAACGAAGCTGAGTGGAAAATTATTTAAATTAACAAAATGA

mRNA sequence

ATGGCAACGGCAAGGCCAGAGACCTCCGGACTCCGGGTTCCCTTCACTCCCAATGTTGAAAAAAGAGATGAAAACGAAGCCTACATTCTTCGCCTCCAACTTCCTGAATTCAAGAGGCAGCAAGTTACGGTTAGGGTTGAAGAAGGGAAACGAGTGATGAAGGTCACCGGAGAACGGCTGGCGGGGGACAATCGATGGTTCCGATTTGATGAAACTTTCCCAATTCCTGAAATTTGCGTAATCAACAAAATTTCTGTTCAATTAAAGAAGGGAGTTCTCTTCATTAGAATGATCAAACAAACCAACGGAACGGTGCCGGCGCCTCCGCCGCCCAAACAAAACGAGCAATTAACCCTAGAAAAGGGGAGAGAAGAAATCTCGGCACTGGATCAGAAAATTAGTAGCCCAGAGAAGGAAATTGAAAACAAAAAAGTAGAAAAGATGAAGGATTCGAAAACCGAGGATGTGGGTAAGATTAAAAACGAAGAAACCGCGAAGATCGGCACCGGGACTCCATATCCGAGAACGACAAGTGTTGGAAGGACGTCGGTACCGGCAATGGTAAGTCTAGCGGCGGCAGTTGTGATAGCCGTGGCGGCATATTTCATGTATCTTTTCTTAGTTCAAGAAGTAACGAAGCTGAGTGGAAAATTATTTAAATTAACAAAATGA

Coding sequence (CDS)

ATGGCAACGGCAAGGCCAGAGACCTCCGGACTCCGGGTTCCCTTCACTCCCAATGTTGAAAAAAGAGATGAAAACGAAGCCTACATTCTTCGCCTCCAACTTCCTGAATTCAAGAGGCAGCAAGTTACGGTTAGGGTTGAAGAAGGGAAACGAGTGATGAAGGTCACCGGAGAACGGCTGGCGGGGGACAATCGATGGTTCCGATTTGATGAAACTTTCCCAATTCCTGAAATTTGCGTAATCAACAAAATTTCTGTTCAATTAAAGAAGGGAGTTCTCTTCATTAGAATGATCAAACAAACCAACGGAACGGTGCCGGCGCCTCCGCCGCCCAAACAAAACGAGCAATTAACCCTAGAAAAGGGGAGAGAAGAAATCTCGGCACTGGATCAGAAAATTAGTAGCCCAGAGAAGGAAATTGAAAACAAAAAAGTAGAAAAGATGAAGGATTCGAAAACCGAGGATGTGGGTAAGATTAAAAACGAAGAAACCGCGAAGATCGGCACCGGGACTCCATATCCGAGAACGACAAGTGTTGGAAGGACGTCGGTACCGGCAATGGTAAGTCTAGCGGCGGCAGTTGTGATAGCCGTGGCGGCATATTTCATGTATCTTTTCTTAGTTCAAGAAGTAACGAAGCTGAGTGGAAAATTATTTAAATTAACAAAATGA

Protein sequence

MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVGRTSVPAMVSLAAAVVIAVAAYFMYLFLVQEVTKLSGKLFKLTK*

Homology

[Close]

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWNRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    KK VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKKNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    K  VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    K  VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    K  VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.1e-13
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWNRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    K  VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL
Match: A0A0A0KRC2 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G612820 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL 60
           MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKR+MKVTGERL
Sbjct: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRMMKVTGERL 60

Query: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLE 120
           AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNG VPAPP PKQNEQLTLE
Sbjct: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGPVPAPPRPKQNEQLTLE 120

Query: 121 KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG 180
           KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG
Sbjct: 121 KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG 180

Query: 181 RTSVPAMVSLAAAVVIAVAAYFMYLFLVQEVTKLSGKLFKLTK 224
           R SVPAMVSLAAAVVIAVAAYF+YLFLVQEVTKLSGKLFKLTK
Sbjct: 181 RMSVPAMVSLAAAVVIAVAAYFIYLFLVQEVTKLSGKLFKLTK 223

[Close]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL
Match: A0A5A7SZI3 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001680 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.0e-82
Identity = 177/229 (77.29%), Postives = 188/229 (82.10%), Query Frame = 0


Query: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL 60
           MATARP TS LRVPFTPNVE+RDENEAYILRLQLPEFKRQQVTVRVEEGKRV+KVTGER 
Sbjct: 1   MATARPGTSRLRVPFTPNVEERDENEAYILRLQLPEFKRQQVTVRVEEGKRVVKVTGERQ 60

Query: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLE 120
           AGDN+WFRFDETFPIPEIC+I+KISVQLK GVL IRMIKQT G VPAPP PK NEQLTL+
Sbjct: 61  AGDNQWFRFDETFPIPEICLIDKISVQLKNGVLSIRMIKQTTGPVPAPPRPKHNEQLTLQ 120

Query: 121 KGREEISA--------------------LDQKISSPE-KEIENKKVEKMKDSKTEDVGKI 180
           KGREEISA                    LDQKISS E KEIENKKVEK KDSKT+DVGKI
Sbjct: 121 KGREEISAVAAVAVNDSVKGDSGKAKRTLDQKISSAEKKEIENKKVEKRKDSKTKDVGKI 180

Query: 181 KNEETAKIGTGTPYPRTTSVGRTSVPAMVSLAAAVVIAVAAYFMYLFLV 209
           KNEET  I TGTP+P  TSVGR S+PAMVSLAAA VIAV A F+YLFL+
Sbjct: 181 KNEETTMISTGTPFPGVTSVGRLSLPAMVSLAAATVIAVVANFIYLFLL 229

[Close]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL
Match: A0A1S3BH11 (inactive protein RESTRICTED TEV MOVEMENT 2 OS=Cucumis melo OX=3656 GN=LOC103489563 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.0e-82
Identity = 177/229 (77.29%), Postives = 188/229 (82.10%), Query Frame = 0


Query: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL 60
           MATARP TS LRVPFTPNVE+RDENEAYILRLQLPEFKRQQVTVRVEEGKRV+KVTGER 
Sbjct: 1   MATARPGTSRLRVPFTPNVEERDENEAYILRLQLPEFKRQQVTVRVEEGKRVVKVTGERQ 60

Query: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLE 120
           AGDN+WFRFDETFPIPEIC+I+KISVQLK GVL IRMIKQT G VPAPP PK NEQLTL+
Sbjct: 61  AGDNQWFRFDETFPIPEICLIDKISVQLKNGVLSIRMIKQTTGPVPAPPRPKHNEQLTLQ 120

Query: 121 KGREEISA--------------------LDQKISSPE-KEIENKKVEKMKDSKTEDVGKI 180
           KGREEISA                    LDQKISS E KEIENKKVEK KDSKT+DVGKI
Sbjct: 121 KGREEISAVAAVAVNDSVKGDSGKAKRTLDQKISSAEKKEIENKKVEKRKDSKTKDVGKI 180

Query: 181 KNEETAKIGTGTPYPRTTSVGRTSVPAMVSLAAAVVIAVAAYFMYLFLV 209
           KNEET  I TGTP+P  TSVGR S+PAMVSLAAA VIAV A F+YLFL+
Sbjct: 181 KNEETTMISTGTPFPGVTSVGRLSLPAMVSLAAATVIAVVANFIYLFLL 229

[Close]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL
Match: A0A6J1DAL2 (inactive protein RESTRICTED TEV MOVEMENT 2 OS=Momordica charantia OX=3673 GN=LOC111018709 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31
Identity = 112/320 (35.00%), Postives = 149/320 (46.56%), Query Frame = 0


Query: 1   MATARPETSGLRV-----------PFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEG 60
           M T RP T GL             PFTP VE+++E EA+IL+L+L +F +QQ   RV+EG
Sbjct: 1   MTTLRPRTGGLDALRRQSFRAYYEPFTPKVEEKEETEAHILQLELTDFDKQQFKFRVDEG 60

Query: 61  KRVMKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNG------ 120
            R + VTG R AG+N+W + D+T+PIPE C+I+KI  + + G+L I M KQ  G      
Sbjct: 61  TRTVAVTGTRNAGNNKWLKLDKTYPIPENCLIDKIDDKFEGGILTITMPKQITGAETAAA 120

Query: 121 ----TVPAPPPPKQNEQLTLE--------------------------------------- 180
               T  A PPPK+ EQ T E                                       
Sbjct: 121 AAAETAVAAPPPKEPEQPTPEISPETAATPETKTETKAPEEALPKDDSNSVKPADDGKGK 180

Query: 181 --------------------------------KGREEISALDQKISSPE------KEIEN 214
                                            G  + ++ D+KI SP+      +EIEN
Sbjct: 181 SAELQKQASAGAKEEAPPQGAAAAEKGPAQGDSGEPKTTSQDEKIGSPDEKPTEKREIEN 240

[Close]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL
Match: A0A6J1G142 (proteoglycan 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449725 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-23
Identity = 85/198 (42.93%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 1   MATARPETSGL-----------RVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEG 60
           MAT RP T+GL             PFTPNV ++DENEA+ILRL+LP+F  Q V V+VEEG
Sbjct: 1   MATGRPRTAGLGALRRQSLRAYNEPFTPNVVEKDENEAHILRLELPDFNEQHVKVKVEEG 60

Query: 61  KRVMKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPP 120
            R + VTG+RL   NR    ++T+PIP+ C I+K+  +L+ G L I M KQT     APP
Sbjct: 61  ARTVVVTGDRLLATNRLLILNKTYPIPQDCSIDKVHHKLEAGFLIITMPKQT-----APP 120

Query: 121 -PPKQNEQLTLEKGREEISALDQKISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAKI 180
             PK  EQ T EKG EE +   +  + P+KE E K  EK   ++  E+   ++ E   K 
Sbjct: 121 AAPKDPEQKTPEKGSEETT--PENATPPQKEPEQKTPEKGSGETSPENASPLQKEPEQK- 180

Query: 181 GTGTPYPRTTSVGRTSVP 186
            T       TS G  S P
Sbjct: 181 -TPEKGSEETSPGNASPP 189

[Close]

BLAST of CSPI05G25960 vs. NCBI nr
Match: XP_031740935.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 6.6e-111
Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL 60
           MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKR+MKVTGERL
Sbjct: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRMMKVTGERL 60

Query: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLE 120
           AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNG VPAPP PKQNEQLTLE
Sbjct: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGPVPAPPRPKQNEQLTLE 120

Query: 121 KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG 180
           KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG
Sbjct: 121 KGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTPYPRTTSVG 180

Query: 181 RTSVPAMVSLAAAVVIAVAAYFMYLFLVQEVTKLSGKLFKLTK 224
           R SVPAMVSLAAAVVIAVAAYF+YLFLVQEVTKLSGKLFKLTK
Sbjct: 181 RMSVPAMVSLAAAVVIAVAAYFIYLFLVQEVTKLSGKLFKLTK 223

[Close]

BLAST of CSPI05G25960 vs. NCBI nr
Match: XP_008447015.1 (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2 [Cucumis melo] >KAA0034625.1 inactive protein RESTRICTED TEV MOVEMENT 2 [Cucumis melo var. makuwa] >TYK09176.1 inactive protein RESTRICTED TEV MOVEMENT 2 [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 177/229 (77.29%), Postives = 188/229 (82.10%), Query Frame = 0


Query: 1   MATARPETSGLRVPFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL 60
           MATARP TS LRVPFTPNVE+RDENEAYILRLQLPEFKRQQVTVRVEEGKRV+KVTGER 
Sbjct: 1   MATARPGTSRLRVPFTPNVEERDENEAYILRLQLPEFKRQQVTVRVEEGKRVVKVTGERQ 60

Query: 61  AGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLE 120
           AGDN+WFRFDETFPIPEIC+I+KISVQLK GVL IRMIKQT G VPAPP PK NEQLTL+
Sbjct: 61  AGDNQWFRFDETFPIPEICLIDKISVQLKNGVLSIRMIKQTTGPVPAPPRPKHNEQLTLQ 120

Query: 121 KGREEISA--------------------LDQKISSPE-KEIENKKVEKMKDSKTEDVGKI 180
           KGREEISA                    LDQKISS E KEIENKKVEK KDSKT+DVGKI
Sbjct: 121 KGREEISAVAAVAVNDSVKGDSGKAKRTLDQKISSAEKKEIENKKVEKRKDSKTKDVGKI 180

Query: 181 KNEETAKIGTGTPYPRTTSVGRTSVPAMVSLAAAVVIAVAAYFMYLFLV 209
           KNEET  I TGTP+P  TSVGR S+PAMVSLAAA VIAV A F+YLFL+
Sbjct: 181 KNEETTMISTGTPFPGVTSVGRLSLPAMVSLAAATVIAVVANFIYLFLL 229

[Close]

BLAST of CSPI05G25960 vs. NCBI nr
Match: KGN52683.2 (hypothetical protein Csa_008758 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 4.6e-64
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 53  MKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPK 112
           MKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNG VPAPP PK
Sbjct: 1   MKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGPVPAPPRPK 60

Query: 113 QNEQLTLEKGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTP 172
           QNEQLTLEKGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTP
Sbjct: 61  QNEQLTLEKGREEISALDQKISSPEKEIENKKVEKMKDSKTEDVGKIKNEETAKIGTGTP 120

Query: 173 YPRTTSVGRTSVPAM 188
           YPRTTSVGR SVPAM
Sbjct: 121 YPRTTSVGRMSVPAM 135

[Close]

BLAST of CSPI05G25960 vs. NCBI nr
Match: XP_022150614.1 (inactive protein RESTRICTED TEV MOVEMENT 2 [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-30
Identity = 112/320 (35.00%), Postives = 149/320 (46.56%), Query Frame = 0


Query: 1   MATARPETSGLRV-----------PFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEG 60
           M T RP T GL             PFTP VE+++E EA+IL+L+L +F +QQ   RV+EG
Sbjct: 1   MTTLRPRTGGLDALRRQSFRAYYEPFTPKVEEKEETEAHILQLELTDFDKQQFKFRVDEG 60

Query: 61  KRVMKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNG------ 120
            R + VTG R AG+N+W + D+T+PIPE C+I+KI  + + G+L I M KQ  G      
Sbjct: 61  TRTVAVTGTRNAGNNKWLKLDKTYPIPENCLIDKIDDKFEGGILTITMPKQITGAETAAA 120

Query: 121 ----TVPAPPPPKQNEQLTLE--------------------------------------- 180
               T  A PPPK+ EQ T E                                       
Sbjct: 121 AAAETAVAAPPPKEPEQPTPEISPETAATPETKTETKAPEEALPKDDSNSVKPADDGKGK 180

Query: 181 --------------------------------KGREEISALDQKISSPE------KEIEN 214
                                            G  + ++ D+KI SP+      +EIEN
Sbjct: 181 SAELQKQASAGAKEEAPPQGAAAAEKGPAQGDSGEPKTTSQDEKIGSPDEKPTEKREIEN 240

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BLAST of CSPI05G25960 vs. NCBI nr
Match: XP_023551679.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-26
Identity = 117/314 (37.26%), Postives = 144/314 (45.86%), Query Frame = 0


Query: 1   MATARPETSGLRV-----------PFTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEG 60
           MAT RP T+GL V           PFTP VE+RDENEA+IL L+LP+F +Q V V+VE+ 
Sbjct: 1   MATTRPRTAGLGVYRRQSQRVYNEPFTPKVEERDENEAHILLLELPDFNQQHVKVKVEKE 60

Query: 61  KRVMKVTGERLAGDNRWFRFDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPP 120
              + VTG R  G+NR    ++T+PIP   VI++IS  L+ GVL I M KQT    PA P
Sbjct: 61  AGTVVVTGGRNVGNNRLLILNKTYPIPRNSVIDRISHTLQDGVLTITMPKQT--AEPATP 120

Query: 121 P-----------PKQNEQLTLEKGREEI-------------------------------- 180
           P           PK+ EQ T EKG+EE                                 
Sbjct: 121 PAAAAPPTPTPLPKEPEQSTPEKGKEETPSAKSALPEMNGEIKEPEAAALPKDDSSSSND 180

Query: 181 ------------------------------------------SALDQKISSP-------E 203
                                                     + LD+KISSP       +
Sbjct: 181 KGKSAELQKQASAKANEETPTPTPAAAAAERGQVQGDSGKAETTLDRKISSPYQKKPTEK 240

[Close]

BLAST of CSPI05G25960 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-14
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P  E +D+ EA IL + L  F ++Q+ V      ++++VTGER   + +W RF+E F 
Sbjct: 19  FVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWSRFNEVFT 78

Query: 75  IPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPKQNEQLTLEKGR--EEISALDQK 134
           +P+ C+++KI    K  VL I M K+T   V   P   + E   LEK    EE   L++ 
Sbjct: 79  VPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEES 138

Query: 135 ISSPEKEIENKKVEK-MKDSKTEDVGKIKNEETAK 167
               ++E E K+++K + + K   + K++ E  AK
Sbjct: 139 RRKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAK 173

[Close]

BLAST of CSPI05G25960 vs. TAIR 10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-09
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P      E +A +L   LP FK++Q+ V V    R +++TGER  G N+W RF +  P
Sbjct: 13  FEPATRWTSEPDAEVLVADLPGFKKEQLKVSV-TATRKLRLTGERPTGGNKWIRFHQEIP 72

Query: 75  IPEICVINKISVQLKKGVLFIRMIK-QTNGTVPAPPPP---KQNEQLTLEKGR 124
           +P    I+ +S   K   L+IR  K +T      PP P   K ++Q   ++G+
Sbjct: 73  VPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQHERKQGQ 124

[Close]

BLAST of CSPI05G25960 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.6e-08
Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 0


Query: 15  FTPNVEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERLAGDNRWFRFDETFP 74
           F P    + E     L + LP F+++Q+ V+V    R ++V G+R AG N+W RF + FP
Sbjct: 17  FEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTT-TRKLRVMGDRPAGANKWIRFRKEFP 76

Query: 75  IPEICVINKISVQLKKGVLFIR------MIKQTN--GTVPAPPP-PKQNEQLTLEKGREE 134
           IP    ++ +S + +   L +R      M KQ +  GT   PPP PK+N  L     +E+
Sbjct: 77  IPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPNLPSPSAKEK 136

Query: 135 ISALDQKISSPEKEIENKKVEKMKDSK---------TEDVGKIKNEETAKIGTGTPYPRT 194
           +    ++    E E+E K+ EK++  K          +D     NE    +G    Y   
Sbjct: 137 VQP-PKETRENETELE-KQAEKIQSPKPARENEEALNQDYRSKVNEYKENLG---GYVAL 196

Query: 195 TSVGRTSVPAMVSLAAAVVIAVAAYF 203
               RT++ A V + AA V+ ++  F
Sbjct: 197 MKNNRTALTAGVVVPAAAVLLLSLGF 216

[Close]

BLAST of CSPI05G25960 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 19  VEKRDENEAYILRLQLPEFKRQQVTVRVEEGKRVMKVTGERL----AGDNRWFR------ 78
           V+ R+  EA++ +  LP  ++++V V VE+G  +++++GER       +++W R      
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDG-NILQISGERSNENEEKNDKWHRVERSSG 111

Query: 79  -FDETFPIPEICVINKISVQLKKGVLFIRMIKQTNGTVPAPPPPK 113
            F   F +PE   + +I   ++ GVL +        TVP  P  K
Sbjct: 112 KFTRRFRLPENAKMEEIKASMENGVLSV--------TVPKVPEKK 147

The following BLAST results are available for this feature:

BLAST of CSPI05G25960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9UC01	1.3e-13	33.55	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX6	3.9e-13	32.90	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	3.9e-13	32.90	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9M670	3.9e-13	32.90	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
D5K211	5.1e-13	32.90	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of CSPI05G25960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRC2	3.2e-111	97.76	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G612820 PE=3 S...	[more]
A0A5A7SZI3	7.0e-82	77.29	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BH11	7.0e-82	77.29	inactive protein RESTRICTED TEV MOVEMENT 2 OS=Cucumis melo OX=3656 GN=LOC1034895...	[more]
A0A6J1DAL2	7.3e-31	35.00	inactive protein RESTRICTED TEV MOVEMENT 2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1G142	2.5e-23	42.93	proteoglycan 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449725 PE=3 SV=...	[more]

BLAST of CSPI05G25960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740935.1	6.6e-111	97.76	inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]	[more]
XP_008447015.1	1.4e-81	77.29	PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2 [Cucumis melo] >KAA0034625...	[more]
KGN52683.2	4.6e-64	97.78	hypothetical protein Csa_008758 [Cucumis sativus]	[more]
XP_022150614.1	1.5e-30	35.00	inactive protein RESTRICTED TEV MOVEMENT 2 [Momordica charantia]	[more]
XP_023551679.1	6.6e-26	37.26	inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI05G25960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04890.1	2.8e-14	32.90	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	4.6e-09	33.63	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	8.6e-08	29.13	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.5e-04	27.62	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	PANTHER	PTHR43670:SF5	PROTEIN RESTRICTED TEV MOVEMENT 2	coord: 8..164
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 22..99 e-value: 4.18857E-9 score: 50.2453
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 11..101 e-value: 1.6E-12 score: 49.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 12..101
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 22..102 e-value: 2.5E-6 score: 27.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 10..120 score: 14.969372
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 8..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G25960.1	CSPI05G25960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane