CSPI05G25900 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G25900
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA repair REX1-B protein
Location	Chr5: 25003453 .. 25005931 (-)
RNA-Seq Expression	CSPI05G25900
Synteny	CSPI05G25900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCACGGAGTTGTATATATAGAGAGAGAAGTGTGAGACAATTGAGGTTTCATAACATCGCTGAACTAAACTAAAGAATGGAAGATTTTGAGAAGAAGCTCTCTCTCGATGAACAAATGGAGGAAGATCGGAAAACCGATTCCTCTAACACTCTCTCTTTGCTCCGCCAGTTTCTCGAAATCCAGCAGCGTAGAGCTGAAGCTTATTCCAAGCTTAAAAGGTACTATTGATTTTGGTTCTCGATTTCGTTTTCCTTTGAAATTTTGATAGCTGTTCTTTAAAAGAAATGAAGAATTCGATCATTCGAGTTATATGTATGTGTTTAACTTCTGTTTTACTGTTTTTCCACGCCGCATGATTTTATCCTAAACCTCGTTTAATGTACATTTGCTTTCGCAGTAGGTCCATACAGATCGATGATTATAAAATCGTGAACGAATTCTGTTAGTCTTAGTCCTAAACGAGCTTAGCGACGAAGTTTCGAGTGTATTTTTGCGAATTATTTATGGAATCTTTGAAGTCTTTATCGTTTTGTTAATTCGCAGGGGGTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCAGTGAGATCACTACGGAATTCAGTAATTGCTCTAAACAAGTTCGTTGCACGATTTTCACAGTATTTCGTTGAGGCGTGGTGTTCTTTAAGCTTCTTTGTGAGATTTTCCTTTTTGGACTCTCTTTTGTTGTAGGTCATTGACATCGAATCGAATTTCCGGAGTTCAGATCATAACAGGCTCGAGTTAGCCAACCAGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCACCTGGTATGTCATGTCCAGAAAGTTCTCTAGAAAATTTTGGATTTATTTTTTGGCAGCATCCTTTCCTCCTCTGCGAAGATTAAGTTTGGCTAATTGTATAATTTTAGACTTCAAAACCATACGGTGCTTTCATTCAATCGCAATCAGTCAGTTAGACTTGTAATTCCAAAAATTGCTGAAAATTAGTAGGATTGCTGATTGCTAAGTATGGAAATAAGGCATAAATGTTTATCACATTAAGACAACAATCCTTAAGGCGTAAGATACAAAAGACCTTTGAAACGTTGTTCAGACAGAAACTCTACCTATTGGTAAATCTAAATTGTGTAAAGCATCATATTCTAAAGTCCAAGCTCCAATTCTATCGAATTGAAGTAAGATGGATATTCGGTTCACGTTTTCTTAGGAATTCTAGATTTGGTACAAGTATCATTTTATATTTAATAGTAAAATGGTTGTTCTTATGCATGTTAATAGAAATATTGATAAACCTTCACATCAATGGATATATGGAAATATTCAATGAAATGTTTCTTATCTAAAAAAATGGATATATATAAATATTGATATGTCGATTGATGTATAAACCTTGAAGCTTAAGCTTGATTCCTAGTTTATTTGTGGATTCCTTTATTGTGTCTGTCATGTCAACAAGAAAGTTACCTCAAGTGGATTTGAGTGATCGCTCTTCAATATCCATCAATGATGCACTGGTTTTCCTTTAACTCTATCTTATTATCCATCCAAACAAGTTTTGAGCACGAGCAAAAGCCATGTTCTACCGATCATTTCATCAAAGAATTCTAGCCAGAAAAATGCAGGGTATAGGAGATAAGATAATGGCATTGGTGGTGAGGAATTTTAACCATCTAAACTGCATTGAACCAACTTTTCTTTGTATTACAATGAGCTGCATCTCTAGAATTTAGTCTTGGAAGGAAATGATTCTAATTCTGTTATTCTCCACTCATGAGATTATTATTTTCTGTTTTTAAAAGCAGCTTTAACGAACTTTTCTAGATGTGAAATGACACCTTGATTTCCCCCTTTTCCTCTTTAAATTGCTGAACTCAATGACGTAGATTTTCATTTAACTGCCCAAGTTCTTCAGTAGTGGTATGTTAGCTTACCTTTGAATGCTTTCTCACTTGTCAATGAATGTGCTTTTGTTGGACATAAAGTTTAGTAGTTGAGTGATCTTGGATTATCTTCACCTAACTATTATCTCTTTAAAGACAGCTCAAATTCAGTTATTGAAGAAAGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGTAGATTCAATGCACCTCGAGAGCACGAGTGTGTGCATGTCCATGAGATAACCGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCGGAATACGACAATGCTCTAAAGGAAGCAATCAAAGGTGTGCAAGATGCTGTGACGACCATAAATGAGCACATGGAGGAGGTGAGATACGAGATCGAAGCTCTCGAAGATAAGTAATCTTGCAATACATCTATTATGATAATTTGAACATCTTTCTCTCTATGCAATTGAATTGGCTACTGAAATATCTATAAAATGAACCACATCAAGAAAGAATTTGATAAAACAAATCAAATTCCAATTCACTTTAGTTCAT

mRNA sequence

GTTCACGGAGTTGTATATATAGAGAGAGAAGTGTGAGACAATTGAGGTTTCATAACATCGCTGAACTAAACTAAAGAATGGAAGATTTTGAGAAGAAGCTCTCTCTCGATGAACAAATGGAGGAAGATCGGAAAACCGATTCCTCTAACACTCTCTCTTTGCTCCGCCAGTTTCTCGAAATCCAGCAGCGTAGAGCTGAAGCTTATTCCAAGCTTAAAAGGGGGTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCAGTGAGATCACTACGGAATTCAGTAATTGCTCTAAACAAGTCATTGACATCGAATCGAATTTCCGGAGTTCAGATCATAACAGGCTCGAGTTAGCCAACCAGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTATTGAAGAAAGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGTAGATTCAATGCACCTCGAGAGCACGAGTGTGTGCATGTCCATGAGATAACCGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCGGAATACGACAATGCTCTAAAGGAAGCAATCAAAGGTGTGCAAGATGCTGTGACGACCATAAATGAGCACATGGAGGAGGTGAGATACGAGATCGAAGCTCTCGAAGATAAGTAATCTTGCAATACATCTATTATGATAATTTGAACATCTTTCTCTCTATGCAATTGAATTGGCTACTGAAATATCTATAAAATGAACCACATCAAGAAAGAATTTGATAAAACAAATCAAATTCCAATTCACTTTAGTTCAT

Coding sequence (CDS)

ATGGAAGATTTTGAGAAGAAGCTCTCTCTCGATGAACAAATGGAGGAAGATCGGAAAACCGATTCCTCTAACACTCTCTCTTTGCTCCGCCAGTTTCTCGAAATCCAGCAGCGTAGAGCTGAAGCTTATTCCAAGCTTAAAAGGGGGTTCGATGAGTATATGACTTCAGGAAGGGAGATATCTTACCAACAGCTTTGCAGTGAGATCACTACGGAATTCAGTAATTGCTCTAAACAAGTCATTGACATCGAATCGAATTTCCGGAGTTCAGATCATAACAGGCTCGAGTTAGCCAACCAGCTTAGATCTGTTCAAGAACAAGAAAAGCAGAAATTGCACCTGACAGCTCAAATTCAGTTATTGAAGAAAGCTGGCCGCCCATCAGAGCGCTTGGTGAGCCACGAGAATTGTAGATTCAATGCACCTCGAGAGCACGAGTGTGTGCATGTCCATGAGATAACCGAAGCTTCAGGTACCGAGGAAGCAGAAGCAGATGCGGAATACGACAATGCTCTAAAGGAAGCAATCAAAGGTGTGCAAGATGCTGTGACGACCATAAATGAGCACATGGAGGAGGTGAGATACGAGATCGAAGCTCTCGAAGATAAGTAA

Protein sequence

MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQDAVTTINEHMEEVRYEIEALEDK*

Homology

[Close]

BLAST of CSPI05G25900 vs. ExPASy TrEMBL
Match: A0A0A0KUN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612270 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60
           MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI
Sbjct: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60

Query: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120
           SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL
Sbjct: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120

Query: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180
           LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ
Sbjct: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180

Query: 181 DAVTTINEHMEEVRYEIEALEDK 204
           DAVTTINEHMEEVRYEIEALEDK
Sbjct: 181 DAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of CSPI05G25900 vs. ExPASy TrEMBL
Match: A0A5D3CFT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001610 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100
Identity = 198/203 (97.54%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60
           MEDFEKKLSLDEQMEEDR TDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI
Sbjct: 1   MEDFEKKLSLDEQMEEDRGTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60

Query: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120
           SYQQLCSEITTEFSNCSKQVIDIESNFR+SDHNRLELAN LRSVQEQEKQKLHLTAQIQL
Sbjct: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLTAQIQL 120

Query: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180
           LKKAGRPSERLVSHENCR NAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ
Sbjct: 121 LKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180

Query: 181 DAVTTINEHMEEVRYEIEALEDK 204
           DAVTTIN+HMEEVRYEIEALEDK
Sbjct: 181 DAVTTINDHMEEVRYEIEALEDK 203

[Close]

BLAST of CSPI05G25900 vs. ExPASy TrEMBL
Match: A0A1S3BGI9 (uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100
Identity = 198/203 (97.54%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60
           MEDFEKKLSLDEQMEEDR TDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI
Sbjct: 1   MEDFEKKLSLDEQMEEDRGTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60

Query: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120
           SYQQLCSEITTEFSNCSKQVIDIESNFR+SDHNRLELAN LRSVQEQEKQKLHLTAQIQL
Sbjct: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLTAQIQL 120

Query: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180
           LKKAGRPSERLVSHENCR NAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ
Sbjct: 121 LKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180

Query: 181 DAVTTINEHMEEVRYEIEALEDK 204
           DAVTTIN+HMEEVRYEIEALEDK
Sbjct: 181 DAVTTINDHMEEVRYEIEALEDK 203

[Close]

BLAST of CSPI05G25900 vs. ExPASy TrEMBL
Match: A0A6J1HYI6 (uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467775 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 204
           IKGVQ+AVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of CSPI05G25900 vs. ExPASy TrEMBL
Match: A0A6J1G147 (uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449729 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 204
           IKGVQ+AVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of CSPI05G25900 vs. NCBI nr
Match: XP_004135056.1 (uncharacterized protein LOC101210078 [Cucumis sativus] >KGN52147.1 hypothetical protein Csa_009032 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 6.0e-103
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60
           MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI
Sbjct: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60

Query: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120
           SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL
Sbjct: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120

Query: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180
           LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ
Sbjct: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180

Query: 181 DAVTTINEHMEEVRYEIEALEDK 204
           DAVTTINEHMEEVRYEIEALEDK
Sbjct: 181 DAVTTINEHMEEVRYEIEALEDK 203

[Close]

BLAST of CSPI05G25900 vs. NCBI nr
Match: XP_008446706.1 (PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 uncharacterized protein E6C27_scaffold65G006350 [Cucumis melo var. makuwa] >TYK09169.1 uncharacterized protein E5676_scaffold475G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 374.4 bits (960), Expect = 6.2e-100
Identity = 198/203 (97.54%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60
           MEDFEKKLSLDEQMEEDR TDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI
Sbjct: 1   MEDFEKKLSLDEQMEEDRGTDSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSGREI 60

Query: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQIQL 120
           SYQQLCSEITTEFSNCSKQVIDIESNFR+SDHNRLELAN LRSVQEQEKQKLHLTAQIQL
Sbjct: 61  SYQQLCSEITTEFSNCSKQVIDIESNFRNSDHNRLELANLLRSVQEQEKQKLHLTAQIQL 120

Query: 121 LKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180
           LKKAGRPSERLVSHENCR NAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ
Sbjct: 121 LKKAGRPSERLVSHENCRINAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIKGVQ 180

Query: 181 DAVTTINEHMEEVRYEIEALEDK 204
           DAVTTIN+HMEEVRYEIEALEDK
Sbjct: 181 DAVTTINDHMEEVRYEIEALEDK 203

[Close]

BLAST of CSPI05G25900 vs. NCBI nr
Match: XP_038892275.1 (uncharacterized protein LOC120081463 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 5.1e-94
Identity = 188/206 (91.26%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKT---DSSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMTSG 60
           MEDFEKKLSLDEQMEED++T   DSSNTLSLLR+FLEIQQRRAEAY++LKRGFDEYMTSG
Sbjct: 1   MEDFEKKLSLDEQMEEDQRTDASDSSNTLSLLREFLEIQQRRAEAYARLKRGFDEYMTSG 60

Query: 61  REISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLTAQ 120
           REISYQQLCS+ITTEFSNCSKQVIDIESNFRSSDHNRLELAN LRSVQE+EKQKLHLTAQ
Sbjct: 61  REISYQQLCSQITTEFSNCSKQVIDIESNFRSSDHNRLELANLLRSVQEKEKQKLHLTAQ 120

Query: 121 IQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEAIK 180
           IQLLKKAGRPSER+VSHENCRFNAPREHECVHVHE+T ASGTEEAEA+AEYDNALKEAIK
Sbjct: 121 IQLLKKAGRPSERVVSHENCRFNAPREHECVHVHEMTGASGTEEAEAEAEYDNALKEAIK 180

Query: 181 GVQDAVTTINEHMEEVRYEIEALEDK 204
           GVQD VTTINE+MEEVRYEI ALEDK
Sbjct: 181 GVQDTVTTINEYMEEVRYEIAALEDK 206

[Close]

BLAST of CSPI05G25900 vs. NCBI nr
Match: XP_023541138.1 (uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHEC+HVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECLHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 204
           IKGVQDAVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQDAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of CSPI05G25900 vs. NCBI nr
Match: XP_022945518.1 (uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 uncharacterized protein C19orf60 homolog [Cucurbita maxima] >KAG6573912.1 Required for excision 1-B domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.3 bits (869), Expect = 2.2e-89
Identity = 182/208 (87.50%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MEDFEKKLSLDEQMEEDRKTD-----SSNTLSLLRQFLEIQQRRAEAYSKLKRGFDEYMT 60
           MEDF+KKLSL EQMEED +T      SSNTL+LLR+FLEIQQRRAEAY++LKRGFDEYMT
Sbjct: 1   MEDFDKKLSLAEQMEEDGRTSGDSSGSSNTLTLLRKFLEIQQRRAEAYARLKRGFDEYMT 60

Query: 61  SGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSVQEQEKQKLHLT 120
           SGREISYQQLC EIT EFSNCSKQVIDIESNF S DH+R+ELA+ LRSVQEQEKQKLHLT
Sbjct: 61  SGREISYQQLCGEITAEFSNCSKQVIDIESNFCSPDHDRIELASLLRSVQEQEKQKLHLT 120

Query: 121 AQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180
           AQIQLLKKAGRPSERLVSHENCRF  PREHECVHVHEITEASGTEEAEADAEYDNALKEA
Sbjct: 121 AQIQLLKKAGRPSERLVSHENCRFKTPREHECVHVHEITEASGTEEAEADAEYDNALKEA 180

Query: 181 IKGVQDAVTTINEHMEEVRYEIEALEDK 204
           IKGVQ+AVTTINEHMEEVRYEI ALEDK
Sbjct: 181 IKGVQEAVTTINEHMEEVRYEIAALEDK 208

[Close]

BLAST of CSPI05G25900 vs. TAIR 10
Match: AT5G04910.1 (unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-65
Identity = 133/217 (61.29%), Postives = 165/217 (76.04%), Query Frame = 0


Query: 2   EDFEKKLSLDEQMEEDRKTD-----------------SSNTLSLLRQFLEIQQRRAEAYS 61
           EDF+KK+SL + +  D + +                 +S TL LLR  LEIQQRRA+AY+
Sbjct: 4   EDFQKKVSLRDSLSGDIENECGGSGVGSTSSTVGSGVASQTLVLLRSLLEIQQRRAQAYA 63

Query: 62  KLKRGFDEYMTSGREISYQQLCSEITTEFSNCSKQVIDIESNFRSSDHNRLELANQLRSV 121
            LK GF EY+ SG E  YQ+LCSEITTEFS CSKQV ++ES F + +  R +LA  L  +
Sbjct: 64  NLKSGFSEYVESGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDI 123

Query: 122 QEQEKQKLHLTAQIQLLKKAGRPSERLVSHENCRFNAPREHECVHVHEITEASGTEEAEA 181
           Q QEKQKLHLT  IQ+LKKAGRPSER+++HENC+F  P +HECVH+HEITEA+GTEEAEA
Sbjct: 124 QTQEKQKLHLTVTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEA 183

Query: 182 DAEYDNALKEAIKGVQDAVTTINEHMEEVRYEIEALE 202
           DAE+DNALKEAI+GVQDAVT+INE++E++RYEIEALE
Sbjct: 184 DAEFDNALKEAIRGVQDAVTSINEYLEDIRYEIEALE 220

The following BLAST results are available for this feature:

BLAST of CSPI05G25900 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G25900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUN3	2.9e-103	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612270 PE=4 SV=1	[more]
A0A5D3CFT2	3.0e-100	97.54	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BGI9	3.0e-100	97.54	uncharacterized protein LOC103489347 OS=Cucumis melo OX=3656 GN=LOC103489347 PE=...	[more]
A0A6J1HYI6	1.1e-89	87.50	uncharacterized protein C19orf60 homolog OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G147	1.1e-89	87.50	uncharacterized protein C19orf60 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CSPI05G25900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135056.1	6.0e-103	100.00	uncharacterized protein LOC101210078 [Cucumis sativus] >KGN52147.1 hypothetical ...	[more]
XP_008446706.1	6.2e-100	97.54	PREDICTED: uncharacterized protein LOC103489347 [Cucumis melo] >KAA0034618.1 unc...	[more]
XP_038892275.1	5.1e-94	91.26	uncharacterized protein LOC120081463 [Benincasa hispida]	[more]
XP_023541138.1	1.7e-89	87.50	uncharacterized protein C19orf60 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022945518.1	2.2e-89	87.50	uncharacterized protein C19orf60 homolog [Cucurbita moschata] >XP_022968603.1 un...	[more]

BLAST of CSPI05G25900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04910.1	2.4e-65	61.29	unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	COILS	Coil	Coil	coord: 104..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
IPR039491	Required for excision 1-B domain-containing protein	PFAM	PF14966	DNA_repr_REX1B	coord: 28..122 e-value: 3.9E-32 score: 110.7
IPR039491	Required for excision 1-B domain-containing protein	PANTHER	PTHR28309	REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN	coord: 19..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G25900.1	CSPI05G25900.1	mRNA