CSPI05G23290 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G23290
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Thioredoxin h
Location	Chr5: 23409035 .. 23409791 (-)
RNA-Seq Expression	CSPI05G23290
Synteny	CSPI05G23290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCAAGCTTTACGGTCCCACGTTCAAAATCTTCTAATGCAATGATACAACAAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTGTAAGTAATTTCATAACATACAATAATGTATATGTTTTTGTTGTGGACAAGCACTAGCAGCTGGGTTGGTTTAACTTTGTTGTTGTGGTTTGTTATGGTATAGATGGTGATTGACTTCACTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGACTATCAAGGAATTTGCTGCAAGGTTCAAGGACGTTGAGTTCGTTAAAATCGATGTCGATGAATTAATGGTATGAGCTTTCAAACTTGTCTTGTTTTGTTTTAGTTCAGTACATGACATGACTTGTTGAGAAAAATGGATGACAACACAGGATGTTGCAAAGGAATATGGAGTGGAGGCAATGCCAACATTCATACTGATTAAGAACGGTAAAGTAATCGATAAGGTGGTCGGAGCCAGGAGGGATGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGATTGATGCTTATGAAGCTCCTCAATAAGGAAGGAAGATAAAAGTAAAATAAAGAACCAGGAATCTAGTTGTCTAGAACAAACTAAAATGGTTTTTGCTGTTTATTTATTAGCTCAGCCCTTCTGACTTGTGATTTTTATATATATATATTCTATATATTGCTCTTCATGTATTTGCTC

mRNA sequence

ATGGGAGCAAGCTTTACGGTCCCACGTTCAAAATCTTCTAATGCAATGATACAACAAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGACTATCAAGGAATTTGCTGCAAGGTTCAAGGACGTTGAGTTCGTTAAAATCGATGTCGATGAATTAATGGATGTTGCAAAGGAATATGGAGTGGAGGCAATGCCAACATTCATACTGATTAAGAACGGTAAAGTAATCGATAAGGTGGTCGGAGCCAGGAGGGATGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGATTGATGCTTATGAAGCTCCTCAATAAGGAAGGAAGATAAAAGTAAAATAAAGAACCAGGAATCTAGTTGTCTAGAACAAACTAAAATGGTTTTTGCTGTTTATTTATTAGCTCAGCCCTTCTGACTTGTGATTTTTATATATATATATTCTATATATTGCTCTTCATGTATTTGCTC

Coding sequence (CDS)

ATGGGAGCAAGCTTTACGGTCCCACGTTCAAAATCTTCTAATGCAATGATACAACAAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGACTATCAAGGAATTTGCTGCAAGGTTCAAGGACGTTGAGTTCGTTAAAATCGATGTCGATGAATTAATGGATGTTGCAAAGGAATATGGAGTGGAGGCAATGCCAACATTCATACTGATTAAGAACGGTAAAGTAATCGATAAGGTGGTCGGAGCCAGGAGGGATGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGA

Protein sequence

MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKHSKY*

Homology

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BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-32
Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 18  QQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVE 77
           + +P  +++    A+W   F   KE+NKL+V+DF+A+WCGPCR +EP I   A +F DV+
Sbjct: 21  ESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVD 80

Query: 78  FVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEK 128
           FVK+DVDEL DVAKE+ V AMPTF+L+K GK I++++GA++D+L+KK+ K
Sbjct: 81  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]

BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDV 83
           +I CH+K ++ A+    KE  K+++IDFTA+WCGPCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKH 129
           DEL +VA++Y VEAMPTF+ IK+G   DKVVGAR+DDLQ  I KH
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARF-KDVEFVKID 83
           +I CH    WT + +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKHS 130
           VDEL  VAKE+GVEAMPTF+ IK G+V+DK+VGA ++DLQ KI KH+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDV 83
           +I CH+K ++ A+    KE  K+++IDFTA+WCGPCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKH 129
           DEL +VA++Y VEAMPTF+ IK+G   DKVVGAR+DDLQ  I KH
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-29
Identity = 53/106 (50.00%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDV 83
           +I CH   +W  +F+  K++ KL+VIDFTA+WCGPCR + P + E A +F  V F K+DV
Sbjct: 7   VIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDV 66

Query: 84  DELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKHS 130
           D+L DVA+EY VEAMP+F+++K G+ ++++VGAR+D+L  KI  H+
Sbjct: 67  DDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVHA 112

[Close]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL
Match: A0A0A0KQG0 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.0e-68
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEPTIKE AARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL
Match: A0A5A7SWX8 (Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00350 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.6e-64
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVP SKSSNAMIQ KPPTIIECHDKAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEP IKEFAARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKVIDKVVG RR++
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL
Match: A0A1S3BE83 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103489073 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.6e-64
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVP SKSSNAMIQ KPPTIIECHDKAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEP IKEFAARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKVIDKVVG RR++
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL
Match: A0A6J1DAH1 (thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVPRSKSSNA +Q K PTI+ECH K QWTARFEA+KETNKL+VIDFTA WCGPCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEPTIKEFAARF DVEFVKIDVDEL DVA+EYGVEAMPTFILIKNGKVIDKVVGAR++D
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL
Match: A0A6J1F7B2 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.5e-60
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFT+PRSKSSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWCGPCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
            MEPTIKEFA+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIE H KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of CSPI05G23290 vs. NCBI nr
Match: XP_004135204.1 (thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 4.1e-68
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEPTIKE AARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CSPI05G23290 vs. NCBI nr
Match: XP_008446296.1 (PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0034376.1 thioredoxin H-type [Cucumis melo var. makuwa] >TYK15543.1 thioredoxin H-type [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVP SKSSNAMIQ KPPTIIECHDKAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEP IKEFAARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKVIDKVVG RR++
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CSPI05G23290 vs. NCBI nr
Match: XP_038892719.1 (thioredoxin H4-like [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 118/131 (90.08%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVPRSKSSNA +Q K P I+EC +KAQWTARFEATKETNKLMVIDFTAAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNATLQPKTPIIVECRNKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEP IKEFAARFKDVEFVKIDVDELMDVA+EYGVEAMPTFILIKNGKV+DKVVGARR+D
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDVAQEYGVEAMPTFILIKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of CSPI05G23290 vs. NCBI nr
Match: XP_022151175.1 (thioredoxin H4-like [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFTVPRSKSSNA +Q K PTI+ECH K QWTARFEA+KETNKL+VIDFTA WCGPCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
           HMEPTIKEFAARF DVEFVKIDVDEL DVA+EYGVEAMPTFILIKNGKVIDKVVGAR++D
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of CSPI05G23290 vs. NCBI nr
Match: XP_022936042.1 (thioredoxin H4-like [Cucurbita moschata] >XP_022957099.1 thioredoxin H4-like [Cucurbita moschata])

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 112/131 (85.50%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60
           MGASFT+PRSKSSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWCGPCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120
            MEPTIKEFA+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIE H KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of CSPI05G23290 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 138.7 bits (348), Expect = 3.5e-33
Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 18  QQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVE 77
           + +P  +++    A+W   F   KE+NKL+V+DF+A+WCGPCR +EP I   A +F DV+
Sbjct: 21  ESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVD 80

Query: 78  FVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEK 128
           FVK+DVDEL DVAKE+ V AMPTF+L+K GK I++++GA++D+L+KK+ K
Sbjct: 81  FVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]

BLAST of CSPI05G23290 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 7.3e-31
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARF-KDVEFVKID 83
           +I CH    WT + +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKHS 130
           VDEL  VAKE+GVEAMPTF+ IK G+V+DK+VGA ++DLQ KI KH+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CSPI05G23290 vs. TAIR 10
Match: AT1G59730.1 (thioredoxin H-type 7 )

HSP 1 Score: 125.2 bits (313), Expect = 4.0e-29
Identity = 51/105 (48.57%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDV 83
           ++E   + QW + F++ K +NKL+VIDFTA WCGPC+ MEP ++E A+++ +  F ++DV
Sbjct: 23  VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82

Query: 84  DELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKH 129
           D LMDVA  Y    +P F+ +K G+ ID+VVGA+ D+L KKIE+H
Sbjct: 83  DRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIEQH 127

[Close]

BLAST of CSPI05G23290 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 124.8 bits (312), Expect = 5.2e-29
Identity = 52/109 (47.71%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 22  PTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKI 81
           P I+E  +  QW +R  A K+TNKL+VI+FTA WCGPC+ +EP ++E AA++ DVEFVKI
Sbjct: 37  PCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKI 96

Query: 82  DVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKHSK 131
           DVD LM V  E+ +  +P  + +K G+ +D VVG + D+L++K+ K+++
Sbjct: 97  DVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]

BLAST of CSPI05G23290 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCRHMEPTIKEFAARFKDVEFVKIDV 83
           +I CH    W  + +   E+ KL+VIDFTA+WC PCR + P   E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDDLQKKIEKH 129
           DEL  VA+E+ VEAMPTF+ +K G +ID+VVGA +D++ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

The following BLAST results are available for this feature:

BLAST of CSPI05G23290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	4.9e-32	51.82	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q0D840	1.0e-29	54.29	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
Q39239	1.0e-29	55.14	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
A2YIW7	1.0e-29	54.29	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
Q96419	2.3e-29	50.00	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]

BLAST of CSPI05G23290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQG0	2.0e-68	99.24	Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1	[more]
A0A5A7SWX8	8.6e-64	93.13	Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00...	[more]
A0A1S3BE83	8.6e-64	93.13	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103489073 PE=4 SV=1	[more]
A0A6J1DAH1	4.0e-61	88.55	thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1	[more]
A0A6J1F7B2	7.5e-60	85.50	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1	[more]

BLAST of CSPI05G23290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135204.1	4.1e-68	99.24	thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853...	[more]
XP_008446296.1	1.8e-63	93.13	PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0034376.1 thioredoxin H-type [C...	[more]
XP_038892719.1	1.7e-61	90.08	thioredoxin H4-like [Benincasa hispida]	[more]
XP_022151175.1	8.2e-61	88.55	thioredoxin H4-like [Momordica charantia]	[more]
XP_022936042.1	1.6e-59	85.50	thioredoxin H4-like [Cucurbita moschata] >XP_022957099.1 thioredoxin H4-like [Cu...	[more]

BLAST of CSPI05G23290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	3.5e-33	51.82	thioredoxin 2	[more]
AT1G19730.1	7.3e-31	55.14	Thioredoxin superfamily protein	[more]
AT1G59730.1	4.0e-29	48.57	thioredoxin H-type 7	[more]
AT1G69880.1	5.2e-29	47.71	thioredoxin H-type 8	[more]
AT1G45145.1	3.4e-28	50.48	thioredoxin H-type 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 47..55 score: 43.64 coord: 94..105 score: 39.12 coord: 55..64 score: 57.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 6..130 e-value: 2.5E-40 score: 139.3
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 17..129
None	No IPR available	PANTHER	PTHR10438:SF416	THIOREDOXIN H7	coord: 17..129
None	No IPR available	CDD	cd02947	TRX_family	coord: 37..126 e-value: 7.90272E-38 score: 121.511
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 37..127 e-value: 1.5E-29 score: 102.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..130 score: 15.049949
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 48..66
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 16..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G23290.1	CSPI05G23290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity