CSPI05G22470 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G22470
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 22906497 .. 22907664 (+)
RNA-Seq ExpressionCSPI05G22470
SyntenyCSPI05G22470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGGACGTACTAAATTTAGGTTAAATGAATGAAAATAATATATGTATTGACCAATCCATATTTTTTAGTACATCATCAAACATGAAAATATAATTTGTGTACTTTTGATTTAGTTGTCGCCGTTTTAGATTATTTTAGTACTACAACATCGAAATAAATTTGAGACCAAAACGACACGTCGGTTTGGTCGAACCTCCCTGCCCGTTCCTCTTCGTATATATTAATTTTTACTTCAACAAAGTGGATAAGTGCAAGCAATTTGCGGCCAAATGTTGCAGCAGAAGGTCGTTGCTCAAGACTGTGGAAGCTTTCTTTTGGTCGCCACTCTCCACCACCGCATCGTCACATGTGGAGTAGAAAGTCAGTGCAGCGGAAAGGTTGATTTTCAGGCTTGGGATGTCTTTTTTCTGCATATACGCCAGACTGCTCTGCAGGTCGTCGACGGCATCATCGAAGTTCTGTTTGCACACGCCTAGAGACTTCAATGACCCGATCTTCAAGCTTGAATCTTTCGCGCGTTTCGTTTCGAAAATGAGGTGTTCGATGGTGATCTTCAAGGCTGATGTTGGATCGGATGCGCCTTTCACAGTGGACCGACAGAGTGCAGGGAAAGCAGCTTCGTCACAGAGGGCTGATCCTTGGGCTTGGCTGATGAAGACGGCGACGAGGAGAAAGACCATTGAGAAAGAAACCAAATGCTTTTCACCCATTGTTAATTTAATTAATTATCTTCGCTATGAATTGCTTTATTTGTTTTTGGGTTTCTTTCTCGAGGTGGCAAAAATGAGGAACGGGCAGGGGGTGGTTTTGTGAGCATGGGGAGTTTGGCTTTTTTATATTACTTCAATGGCAGTTGGATAACTGCCCCAATAAGAAAGGGTGGTTCTATTTTGGTGGAAGACAAGTTACGAGGCTTTCCTTGATTATAGAGTGACAATTGGTCAATAACATTTTATCTTTTCTTAGACCTAACAAAAAGGTTAATTTTAGTGTTGAATTTGTTTCACTTTTTTAGTTTGCCAAAAGCTCGGAAGGTGGGTGTTAGGTATCCAAAATTAATTTTAGCCGAATTAAGCATGTTAGGGTTACTTTTCACGGTTGTCTAAGTTTCAAGTTGATCGATAACAATTATTGACTCGAATTTATCATTAACATATTGAAATTTTG

mRNA sequence

CAAGGACGTACTAAATTTAGGTTAAATGAATGAAAATAATATATGTATTGACCAATCCATATTTTTTAGTACATCATCAAACATGAAAATATAATTTGTGTACTTTTGATTTAGTTGTCGCCGTTTTAGATTATTTTAGTACTACAACATCGAAATAAATTTGAGACCAAAACGACACGTCGGTTTGGTCGAACCTCCCTGCCCGTTCCTCTTCGTATATATTAATTTTTACTTCAACAAAGTGGATAAGTGCAAGCAATTTGCGGCCAAATGTTGCAGCAGAAGGTCGTTGCTCAAGACTGTGGAAGCTTTCTTTTGGTCGCCACTCTCCACCACCGCATCGTCACATGTGGAGTAGAAAGTCAGTGCAGCGGAAAGGTTGATTTTCAGGCTTGGGATGTCTTTTTTCTGCATATACGCCAGACTGCTCTGCAGGTCGTCGACGGCATCATCGAAGTTCTGTTTGCACACGCCTAGAGACTTCAATGACCCGATCTTCAAGCTTGAATCTTTCGCGCGTTTCGTTTCGAAAATGAGGTGTTCGATGGTGATCTTCAAGGCTGATGTTGGATCGGATGCGCCTTTCACAGTGGACCGACAGAGTGCAGGGAAAGCAGCTTCGTCACAGAGGGCTGATCCTTGGGCTTGGCTGATGAAGACGGCGACGAGGAGAAAGACCATTGAGAAAGAAACCAAATGCTTTTCACCCATTGTTAATTTAATTAATTATCTTCGCTATGAATTGCTTTATTTGTTTTTGGGTTTCTTTCTCGAGGTGGCAAAAATGAGGAACGGGCAGGGGGTGGTTTTGTGAGCATGGGGAGTTTGGCTTTTTTATATTACTTCAATGGCAGTTGGATAACTGCCCCAATAAGAAAGGGTGGTTCTATTTTGGTGGAAGACAAGTTACGAGGCTTTCCTTGATTATAGAGTGACAATTGGTCAATAACATTTTATCTTTTCTTAGACCTAACAAAAAGGTTAATTTTAGTGTTGAATTTGTTTCACTTTTTTAGTTTGCCAAAAGCTCGGAAGGTGGGTGTTAGGTATCCAAAATTAATTTTAGCCGAATTAAGCATGTTAGGGTTACTTTTCACGGTTGTCTAAGTTTCAAGTTGATCGATAACAATTATTGACTCGAATTTATCATTAACATATTGAAATTTTG

Coding sequence (CDS)

ATGTCTTTTTTCTGCATATACGCCAGACTGCTCTGCAGGTCGTCGACGGCATCATCGAAGTTCTGTTTGCACACGCCTAGAGACTTCAATGACCCGATCTTCAAGCTTGAATCTTTCGCGCGTTTCGTTTCGAAAATGAGGTGTTCGATGGTGATCTTCAAGGCTGATGTTGGATCGGATGCGCCTTTCACAGTGGACCGACAGAGTGCAGGGAAAGCAGCTTCGTCACAGAGGGCTGATCCTTGGGCTTGGCTGATGAAGACGGCGACGAGGAGAAAGACCATTGAGAAAGAAACCAAATGCTTTTCACCCATTGTTAATTTAATTAATTATCTTCGCTATGAATTGCTTTATTTGTTTTTGGGTTTCTTTCTCGAGGTGGCAAAAATGAGGAACGGGCAGGGGGTGGTTTTGTGA

Protein sequence

MSFFCIYARLLCRSSTASSKFCLHTPRDFNDPIFKLESFARFVSKMRCSMVIFKADVGSDAPFTVDRQSAGKAASSQRADPWAWLMKTATRRKTIEKETKCFSPIVNLINYLRYELLYLFLGFFLEVAKMRNGQGVVL*
Homology
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BLAST of CSPI05G22470 vs. ExPASy TrEMBL
Match: A0A0A0KVK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599850 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MSFFCIYARLLCRSSTASSKFCLHTPRDFNDPIFKLESFARFVSKMRCSMVIFKADVGSD 60
           MSFFCIYARLLCRSSTASSKFCLHTPRDFNDPIFKLESFARFVSKMRCSMVIFKADVGSD
Sbjct: 1   MSFFCIYARLLCRSSTASSKFCLHTPRDFNDPIFKLESFARFVSKMRCSMVIFKADVGSD 60

Query: 61  APFTVDRQSAGKAASSQRADPWAWLMKTATRRKTIEKETKCFSPIVNLINYLRYELLYLF 120
           APFTVDRQSAGKAASSQRADPWAWLMKTATRRKTIEKETKCFSPIVNLINYLRYELLYLF
Sbjct: 61  APFTVDRQSAGKAASSQRADPWAWLMKTATRRKTIEKETKCFSPIVNLINYLRYELLYLF 120

Query: 121 LGFFLEVAKMRNGQGVVL 139
           LGFFLEVAKMRNGQGVVL
Sbjct: 121 LGFFLEVAKMRNGQGVVL 138

The following BLAST results are available for this feature:
BLAST of CSPI05G22470 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G22470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVK01.2e-71100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599850 PE=4 SV=1[more]
BLAST of CSPI05G22470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI05G22470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G22470.1CSPI05G22470.1mRNA