CSPI05G17240 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCCGACGTAAGAAATGTGGCTGAGGGAACCCGCGAAGTATAAGAAAACCAATAGAGATAAGGCAATCTTTACATTAACGACGAAGAAGCACATACCGCTTCACAACCAAAGGTACCTTCTTCAATGGCTTCTCTCCAAAACTCCCTCTTCATCAATTCTCTCCCTCAGGTTCACAATTCCTTCAAAACTCTTTCCAATCTCTCCTTCTCTCTTCTCCCTGTTCTTACTAACAATCACGTCTTTTTCTTTTTTCCGCTCGCAGAAACTCCATGGCAGATTTGTTTGCTGCAGAGCCGGGGTTTCATTTCTTGTCAGAGCTGAGCAAGCACACGGATCTTCAATTAATGGCCATGCGTGCAGTTCTGAAGGTCAGTTTTTACCGAGTTGACATGGAAAATCAGGTTTTACTTCAATTAGAGTGCCCATTACACTGCCATTTTGCTTGATTTTGTGAGTTAATTGAATGTGCATGCTATTCAGTAATTATCTTGAGTATCCACTTGACTTTGCGCTAGTAAATTGAGAGTGTTGAAGGTTTTATAACTTTTAGAAAAGAGGATTCACATACATCCCTTACTGATGCTGCATTGAAGTTGTAGAACTATAAAGAAACCTCATAGTCAAGTAGTAAATAGAATGGAGATTGAAACGAAATGAGATATGGACGATACAAATCTTCTTAAAAGACATTGTCTCGCCCTTATTTGTAGGTACCACGGTATTACTCAATCCTGTTACACTGGAAATGATATTACTTAAGCGTCGTATTGATTTTGTTGTGTGAATCAAGGGGTTGAATTTCGTCTAGAGATTTTATACAATTTAGATTGTCATACGTAAGGAAAATGTTATGAAACAAACAAATAAAAATAGCAAAAAAAAGTGTAAACTATAGAAATTTACTCCGTTCACTAACAATGTGTTAGCTACTTCACTACTGGAAGAAGGACAATTTATTGTTGGAGAGAATAATTCAGAAACAAAGCAAATGACAGATCTAAGGTCAGAAAGTTTCTAGAGCAGTTTTCTAAAACCTGAGGTCAAATTGTAAAGAATGTAAATATAGCCTTACGACTTAGGTTTCAAGGGCAAACTTGGTCATTCAAAGTGTCATATATCAAACTCAAGGTGTTCCAACAAAAAAACAATTCTACCATTCGAGGAAAATTACCTCGGGCTGAAGCCTCAGTCATGACGGGCTATTATGGACTTTTTTCCCTAGCTATCATGTACCGTTCCTTCACTAGTAACTTATAAACAACATTATCAATTGCCTTCTTTTCCAGCTGAAGGTACCAATTTCTCAAACTCAAATGGTATTTAATAGCTCTTATGATTTTATAACAATCCAGCATTTTTTATACTGCTTTTAGATCTGTTCACGTGAATGATCTCACTTCTTTCTTATCAGCTTTAGAAACAAAGAATTTCATTGTTCAATAGTTGCTCTGTTTTTTTGGCAGATAGACTTGGGAGACGCCAGCTGCTATCTGGCAGTGCCTTTATAACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATGTAAGATTTGTCTCTCTTCTTACTTACACACAACTTACGTTTCTCTTTCATTTAGCTGCTTATCTTCAAGTTCAATTCTGAAATTAGCACCTCTAGCGTGCACTGTATTTCTTTCTTCCAAAATGAAGGATGATGATATCCTAAGGGTACCCGCTTGATATTGCTCAGTTGCTGCAGAAACAAAGAAAGGGTTTCTGTCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTCGGGTGGCAGGTACACTAGTTGTTTAGTTTTTTTTCTCCACTCCTTTACTTTGCACACTTAATCCACTTTAAATTTATATCGGCACAAGATTAAAGTCTTTTTCCTCTCGAGGAATGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTTATCGAACCATTAGAAAATGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCTCCTCAACAGGTTAGCATTAAACAGTTAGAATAATGCATGAAGTTGGTAATTTAATTTTGTAGTTAACTTCTTATCTCATGGTTCAGGTGGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAATTAATTGAAGCATCAGAGGTTTGTCTATTATCCTTCGCTGAGATTTTATCGTACTAGTATTTAACGTATGGAGCGATAAATAGTAGCTGCAAATGGACTTACAAAGTAAATCTGATGCACATGCATCTCTCAACACTACGGTGGAAAATTTTGGAATTCGGGATATTTTCCTGCACGTCCTTAGCAATATTGTAAATCAATCATCTAAAATGGAAAAACACACCCAAAATTAAAACCAGTCATTTTGTGCAATCAGTGAAGTGAAATCTGTCGTTTCAACACTTCATTCCAAATTCATGGCTACAAATATTGATGATAGAACCCATTCCATTAGGTTGTCAATGATCAAGTGTCCCTAGTTGTTTTAGTGCATTTGGGCTGTACATTTTTTTTAGCTTCAATCAAAGTTACAGCGAAAAACATATTTGTTATCTCGACCCCCACCATGGCCGAGACATAAAAACTGGTCCCTTTCACCTCAGCTATACACTCATTGATTTGTTGGATGATACAGCATGACGTTAATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGTATGAAACCTTCGCTAGTCTTGTTTCACTGCTGCTGGGGAACTTACTTCTTGAGCTTTTCTTGTTCCATTATATGTCAGTATTTTAGGCCTATCCAACAAATTGAATTCAAAACAGTTTTGGTTTCGTCTTATTTTACTATCAAACCATATAATGAAATCACATTTAAAGTCCACAAAGTAGAATCTACTTGGATTTCTAACAAAGCTCTTTTTCTTACATTTTTATTGTCAGTTATATCTGTCATTTTTCTATGGCAGGAAAATTCTACACTTTAACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAGTGTTTGATGGAGTTCCCCTGTTGTGAACACATTTATCATTATTCATTCAAACGTCATTCTAATTTTGATTACCCACCTTGTTTTAGAAGTAAACTTCAGTAAATTATCCACACCTTTTGTTCTTCAATTATTCTCATTCCCAAGCAAAACCCCTTGTGTTTTTGGATGACTATGTAAAAGAATGAAGTGGCACCAAGTGTTTGTTGGACCCTAATAGAGCATTTGTTGGACCCTTTTTTTAGACCTAAATTGTAATATCAAATTCATTTCACTTCCACAATTTTCAAGTCAACCTCTTTTTCATCCCGAT GGCCGACGTAAGAAATGTGGCTGAGGGAACCCGCGAAGTATAAGAAAACCAATAGAGATAAGGCAATCTTTACATTAACGACGAAGAAGCACATACCGCTTCACAACCAAAGGTACCTTCTTCAATGGCTTCTCTCCAAAACTCCCTCTTCATCAATTCTCTCCCTCAGAAACTCCATGGCAGATTTGTTTGCTGCAGAGCCGGGGTTTCATTTCTTGTCAGAGCTGAGCAAGCACACGGATCTTCAATTAATGGCCATGCGTGCAGTTCTGAAGATAGACTTGGGAGACGCCAGCTGCTATCTGGCAGTGCCTTTATAACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTGTCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTCGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTTATCGAACCATTAGAAAATGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCTCCTCAACAGGTGGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAATTAATTGAAGCATCAGAGCATGACGTTAATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGAAAATTCTACACTTTAACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAGTGTTTGATGGAGTTCCCCTGTTGTGAACACATTTATCATTATTCATTCAAACGTCATTCTAATTTTGATTACCCACCTTGTTTTAGAAGTAAACTTCAGTAAATTATCCACACCTTTTGTTCTTCAATTATTCTCATTCCCAAGCAAAACCCCTTGTGTTTTTGGATGACTATGTAAAAGAATGAAGTGGCACCAAGTGTTTGTTGGACCCTAATAGAGCATTTGTTGGACCCTTTTTTTAGACCTAAATTGTAATATCAAATTCATTTCACTTCCACAATTTTCAAGTCAACCTCTTTTTCATCCCGAT ATGGCTTCTCTCCAAAACTCCCTCTTCATCAATTCTCTCCCTCAGAAACTCCATGGCAGATTTGTTTGCTGCAGAGCCGGGGTTTCATTTCTTGTCAGAGCTGAGCAAGCACACGGATCTTCAATTAATGGCCATGCGTGCAGTTCTGAAGATAGACTTGGGAGACGCCAGCTGCTATCTGGCAGTGCCTTTATAACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTGTCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTCGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTTATCGAACCATTAGAAAATGTCAGTGTGAATTTGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCTCCTCAACAGGTGGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAAAACAAAATTAATTGAAGCATCAGAGCATGACGTTAATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGAAAATTCTACACTTTAACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAGTGTTTGA MASLQNSLFINSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISSV* Homology
BLAST of CSPI05G17240 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.0e-77 Identity = 143/210 (68.10%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31 Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09 Identity = 57/208 (27.40%), Postives = 92/208 (44.23%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy Swiss-Prot
Match: O49080 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PSBP PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 61/231 (26.41%), Postives = 102/231 (44.16%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy Swiss-Prot
Match: Q04127 (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBP3 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.2e-08 Identity = 62/255 (24.31%), Postives = 103/255 (40.39%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.6e-129 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy TrEMBL
Match: A0A5D3C3H9 (PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002630 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128 Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy TrEMBL
Match: A0A1S3CJG4 (psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128 Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy TrEMBL
Match: A0A6J1BYZ6 (psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006749 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.1e-121 Identity = 219/235 (93.19%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of CSPI05G17240 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 6.8e-120 Identity = 216/233 (92.70%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. NCBI nr
Match: XP_004149814.1 (psbP-like protein 1, chloroplastic [Cucumis sativus] >KGN51262.1 hypothetical protein Csa_008747 [Cucumis sativus]) HSP 1 Score: 471.9 bits (1213), Expect = 3.3e-129 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. NCBI nr
Match: XP_008463515.1 (PREDICTED: psbP-like protein 1, chloroplastic [Cucumis melo] >TYK05768.1 psbP-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 467.6 bits (1202), Expect = 6.3e-128 Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. NCBI nr
Match: XP_038890216.1 (psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123 Identity = 223/234 (95.30%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of CSPI05G17240 vs. NCBI nr
Match: XP_022134529.1 (psbP-like protein 1, chloroplastic [Momordica charantia]) HSP 1 Score: 444.9 bits (1143), Expect = 4.4e-121 Identity = 219/235 (93.19%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of CSPI05G17240 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 442.2 bits (1136), Expect = 2.8e-120 Identity = 217/233 (93.13%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of CSPI05G17240 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 ) HSP 1 Score: 289.3 bits (739), Expect = 2.9e-78 Identity = 143/210 (68.10%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of CSPI05G17240 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 ) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32 Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 0
BLAST of CSPI05G17240 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 ) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-32 Identity = 71/182 (39.01%), Postives = 100/182 (54.95%), Query Frame = 0
BLAST of CSPI05G17240 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 ) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-13 Identity = 41/116 (35.34%), Postives = 58/116 (50.00%), Query Frame = 0
BLAST of CSPI05G17240 vs. TAIR 10
Match: AT1G06680.1 (photosystem II subunit P-1 ) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 61/242 (25.21%), Postives = 98/242 (40.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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