CSPI05G17010 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G17010
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 18323395 .. 18323940 (-)
RNA-Seq ExpressionCSPI05G17010
SyntenyCSPI05G17010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACAGTGCGCAGTGAGAAAACTTTTCAATAGGGCTTCTCTCTCTCAGCTTCCGATCGTCCGTCGCTCCCTTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCCTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTGTTGCTCTTCTTTTTTTTCTTCCAATCCTTTTCTCCCTTCTCCTCGGGTACTTTCTCTCTTCTCTTCTCCGGATTTCAGTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAGATTGCTCACCCTCATTTCTCTTTGTTCTTCAATAAGCACCCGTCTTCTATTGCCAG

mRNA sequence

ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACACTTCCGATCGTCCGTCGCTCCCTTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCCTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTGTTGCTCTTCTTTTTTTTCTTCCAATCCTTTTCTCCCTTCTCCTCGGGTACTTTCTCTCTTCTCTTCTCCGGATTTCAGTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAGATTGCTCACCCTCATTTCTCTTTGTTCTTCAATAAGCACCCGTCTTCTATTGCCAG

Coding sequence (CDS)

ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACACTTCCGATCGTCCGTCGCTCCCTTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCCTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTGTTGCTCTTCTTTTTTTTCTTCCAATCCTTTTCTCCCTTCTCCTCGGGTACTTTCTCTCTTCTCTTCTCCGGATTTCAGTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAG

Protein sequence

MVFFPFRELSLAHAAHFRSSVAPLLPSRPPAFDAAVLQSLASVGRSFSFAKVRCCSSFFSSNPFLPSPRVLSLFSSPDFSGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSGTHLNKLAPSCRSKFKL*
Homology
[Close]
BLAST of CSPI05G17010 vs. ExPASy TrEMBL
Match: A0A0A0KQR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G497030 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 100/148 (67.57%), Postives = 105/148 (70.95%), Query Frame = 0 

Query: 1   MVFFPFRELSLAHAAHFRSSVAPLLPSRPPAFDAAVLQSLASVGRSFSFAKVRCCSSFFS 60
           MVFFPFRELSLAHAA  + +V  L       F+ A L  L  V RS +     C      
Sbjct: 1   MVFFPFRELSLAHAA--QCAVRKL-------FNRASLSQLPIVRRSPAPLPSACVRRCCL 60

Query: 61  SNPFLPSPRVLSLFSSPDFSGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR 120
           S   L  P +L L  SP   GFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR
Sbjct: 61  SVSRLRRP-LLLLRKSP--LGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR 120

Query: 121 TYHRNLIAYRSGTHLNKLAPSCRSKFKL 149
           TYHRNLIAYRSGTHLNKLAPSCRSKFKL
Sbjct: 121 TYHRNLIAYRSGTHLNKLAPSCRSKFKL 136

[Close]
BLAST of CSPI05G17010 vs. NCBI nr
Match: KGN51239.1 (hypothetical protein Csa_008655 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 3.8e-38
Identity = 100/148 (67.57%), Postives = 105/148 (70.95%), Query Frame = 0 

Query: 1   MVFFPFRELSLAHAAHFRSSVAPLLPSRPPAFDAAVLQSLASVGRSFSFAKVRCCSSFFS 60
           MVFFPFRELSLAHAA  + +V  L       F+ A L  L  V RS +     C      
Sbjct: 1   MVFFPFRELSLAHAA--QCAVRKL-------FNRASLSQLPIVRRSPAPLPSACVRRCCL 60

Query: 61  SNPFLPSPRVLSLFSSPDFSGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR 120
           S   L  P +L L  SP   GFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR
Sbjct: 61  SVSRLRRP-LLLLRKSP--LGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHR 120

Query: 121 TYHRNLIAYRSGTHLNKLAPSCRSKFKL 149
           TYHRNLIAYRSGTHLNKLAPSCRSKFKL
Sbjct: 121 TYHRNLIAYRSGTHLNKLAPSCRSKFKL 136

The following BLAST results are available for this feature:
BLAST of CSPI05G17010 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G17010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQR11.8e-3867.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G497030 PE=4 SV=1[more]
BLAST of CSPI05G17010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51239.13.8e-3867.57hypothetical protein Csa_008655 [Cucumis sativus][more]
BLAST of CSPI05G17010 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G17010.1CSPI05G17010.1mRNA