CSPI05G16790 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCGGCCAGAATAAAAGGTAGATCGGAGGTCAAACGAAGTTCCAAAAAACAGAAAGTAGTGCATCGCATCCTTTCATTTTTTTCCCAAAGCATTTTGTTAGAAGAAGGAGAAGGATGGAGATAGCCAAGAAGACTTCTTCCAAGACAAAGATGTATACAGATTCTAATCCAAATGTTTTAGAAGAAATATGTTCACAGATTCAAGCTCCCAGCAAAAGCAACAGATCGGAAGCCCAAAAATCTCTCCCTCCACAATTTAAGTACTGTGTTTTATCATTCCCCAATGCAAAGGCGGATCTTCAAAGAGGAATTCTAGTTCACACTCCACTATATCCATCTCAGAAGAAAAGAAAAGCTGATTTTGTCTCCTTATTCCGTGTAAGCGGTGAGGAATTTGACCAATTTGAGAAATCGGATGAAATAGAAAAGCATAGATAAAAGGAACCAATAGAAGTTGATTTGAATGCTTTGTTTCAGTATGAAGAAGACCAGAAAGTTGAGCAACAAGCTTTGGATTGTTTATCTCAAGTTCACCTTTGTGAAGTTCCAGCCCATCTGAAGTCATTGGTAGCCAA CTTCGGCCAGAATAAAAGGTAGATCGGAGGTCAAACGAAGTTCCAAAAAACAGAAAGTAGTGCATCGCATCCTTTCATTTTTTTCCCAAAGCATTTTGTTAGAAGAAGGAGAAGGATGGAGATAGCCAAGAAGACTTCTTCCAAGACAAAGATGTATACAGATTCTAATCCAAATGTTTTAGAAGAAATATGTTCACAGATTCAAGCTCCCAGCAAAAGCAACAGATCGGAAGCCCAAAAATCTCTCCCTCCACAATTTAAGTACTGTGTTTTATCATTCCCCAATGCAAAGGCGGATCTTCAAAGAGGAATTCTAGTTCACACTCCACTATATCCATCTCAGAAGAAAAGAAAAGCTGATTTTGTCTCCTTATTCCGTGTAAGCGGTGAGGAATTTGACCAATTTGAGAAATCGGATGAAATAGAAAAGCATAGATAAAAGGAACCAATAGAAGTTGATTTGAATGCTTTGTTTCAGTATGAAGAAGACCAGAAAGTTGAGCAACAAGCTTTGGATTGTTTATCTCAAGTTCACCTTTGTGAAGTTCCAGCCCATCTGAAGTCATTGGTAGCCAA ATGGAGATAGCCAAGAAGACTTCTTCCAAGACAAAGATGTATACAGATTCTAATCCAAATGTTTTAGAAGAAATATGTTCACAGATTCAAGCTCCCAGCAAAAGCAACAGATCGGAAGCCCAAAAATCTCTCCCTCCACAATTTAAGTACTGTGTTTTATCATTCCCCAATGCAAAGGCGGATCTTCAAAGAGGAATTCTAGTTCACACTCCACTATATCCATCTCAGAAGAAAAGAAAAGCTGATTTTGTCTCCTTATTCCGTGTAAGCGGTGAGGAATTTGACCAATTTGAGAAATCGGATGAAATAGAAAAGCATAGATAA MEIAKKTSSKTKMYTDSNPNVLEEICSQIQAPSKSNRSEAQKSLPPQFKYCVLSFPNAKADLQRGILVHTPLYPSQKKRKADFVSLFRVSGEEFDQFEKSDEIEKHR* Homology
BLAST of CSPI05G16790 vs. ExPASy TrEMBL
Match: A0A5D3E2G1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00470 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16 Identity = 57/106 (53.77%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of CSPI05G16790 vs. ExPASy TrEMBL
Match: A0A5D3DFL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00070 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of CSPI05G16790 vs. ExPASy TrEMBL
Match: A0A5D3DD96 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00490 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.6e-07 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CSPI05G16790 vs. ExPASy TrEMBL
Match: A0A5D3C143 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001260 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04 Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of CSPI05G16790 vs. NCBI nr
Match: TYK30074.1 (uncharacterized protein E5676_scaffold216G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-15 Identity = 57/106 (53.77%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of CSPI05G16790 vs. NCBI nr
Match: TYK22384.1 (hypothetical protein E5676_scaffold173G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 3.8e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of CSPI05G16790 vs. NCBI nr
Match: TYK21239.1 (DNA-directed RNA polymerase III subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 9.6e-07 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CSPI05G16790 vs. NCBI nr
Match: TYK05663.1 (uncharacterized protein E5676_scaffold98G001260 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04 Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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