CSPI05G15940 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G15940
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	rRNA-processing protein UTP23 homolog
Location	Chr5: 17071911 .. 17077710 (-)
RNA-Seq Expression	CSPI05G15940
Synteny	CSPI05G15940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAATTAAATCCAGATTTAGATAAAAAGGAAAGAAAATTTAAATTTAGGTTTCCTTCTTGGAACCCATCCCCCTCGTTGTCCAGCACCGATCACCGTCCGCCACCCATCGGGCCTCCGTCTCCGTCTGCTACCGAACATTTGCAGCCCGCGCCTCCGCACCCTGGTGACAGCACCGTCACTTTCTCTCTTTATTCCCTAGATTTCTCTCTCCCTCTCTGTATCTAGTTTCTCCCTCGCAGCCATCCACGTCCAGTCGCGCCGCTGCCCGTGGTCGTCAGCCACACCGTCGATCGTCTGCCTTAATCTTGATTATTGGGGCTGACTTTAAAGTCTTGAGGGATAGGAGCTTCTGTCCAACAGATTAAATATCAGGTTTTCTACATTTTGTTGAGATTCTAAAGTTTTAGAACTCTTTTGGACTTGGTTATATTGTTGTAATTTTGTGTTAAACCCTTAAATGTGGTTTATATTTAGGTTGGTTTCTGCATTCGCAGCTTCGGTGAAATTTCGGATTTGGCAAACGTTGGGGATAATTGACTTGGGAATAAATTTGCTTGCTTTTTGGGCTCAGTCTCGAGGTAAGTAAGTTTACTACCGGAATATTTTTTAGCATCCTAGTTTAGATAAATTGTTACGCCGAATAGGTTGTAGAAGCATGCCATGTGATGTTTGAGATAATTGGCTATGTTAGTGTGGATGAGAAGATTGTTATGAGCATGTTGAACTCTATGTAAAATGTATGTAGTATGAAATCATGATGGTTGCTACGATGTATGAAGGGAATGAGTAATATGTAGGTGTGAACTTTGATTTATGACATGGTTCCCGTTGAAAATATGTTGCATGTTAGTTAAGTTCGTGATGATCTACCCTCCTATCAGTTAATGATATCATGTATGACTGTAAATCGTTGGGTTCACTACCACATTATGACTGTGAGCCGATGGGTGGGTTCACGTTCACCACAATGTATCATTCTGTGCCTTCCAGCCACCAGTTATGTGTGATAGAACGGGATAGATTATTCACTTAGATGACCATCGAAGATCAATTATAGTATACATGTTCATTAGTATGAATGCACAGCCTGACCCAGCACTGGAGTTTCTTTGAAGTTAATGTGTACTTAACGTGAAGAAGCTCTTTTAAAACTACCTAGTTTAGTTACTGTGATGAAGGAGGGAAGCTAAGTAGTTTGAAAAAGGGGCCTTAGACATAAAGTGAAAAAGAAAGCTTCTTGAGTTTTTCTGTCTTACCAAATATCTATGAGGAAAAGAAAAAGTATCTAGAAAAGATTTTATTATTTTGAGAAGATGAAGGAAATTAATGTTTTGAGACTACCAGTACATAAGTTTAGTTTGACTTTCTAACATGGGATTTGGATCTGTTTGAAGTTGGTATAAGTAATCTGGTTACTTCTTGGAACTTTGGATCTTCGCATGTGTTGGTTCAATAACTAACTTGCTTAGGCTATTGGTCATGGAACCCAACCTTAGCCTGAGAATCTTCTTCTTAAAATAAAGATTAAGCAGTAACAATCAAGTGTTGGAGGTGTGTTTGGTAAGCTTCAAATTATAGAGTAGTTGAAGAAAAAAAAATCTTTTAGGTGGAGTTGTAAGTAAGTAACAACAGTCTTTTAGAAGCTATTGAAATGGAAGGTTAGGGTTTGTTATTAAAAAGTCAGTTATTGAAGGTATCAACGAGGTTTAAGAGACTTTCATTTTGGCGCACAAATTAGAACATGAAACTAGTGAAGCCATCAATTTGATTTAAAGGTGGATGTAATCTAGTTCAAAGTGAAGATTCAGTTGTATGGGTGTTAAGGTCAAATAATTTAACTTTTCAATATGATCTCTAGCACAAGAGATGAACTTGAGAATAAAGCACTTGCATTAATAAGGCTGATTATAAATCAGTTCTAACAGAGTTGAATATCAAGTCGATACATGAACTGTTTGACATGGTTTTCTTACGTCCTGATCTTTTGTCTTAAGTGCTCACATTTTGTTCATTAAGGAAGAAAGAAGGATAAATGCAACTTTTTCAACTATCAAGAGTTGTTATGGTAGCATAGCCAGGTTGCAGGCAATGCGGGGGAATGTGGGTCCATTAGGTACCAAATCTAGATTCTGAATCTTGGGCTTAGGGTGCTATGGATAGTATGCTCTCTCTTGCATGGGCAATAAGTTGATCAACTCTATGGAGATGAATATTCTCAATATGGATTTATGAGTTGGGATTATTTTTATTTTAAAGGCTATCTTAAAAAACTAGTTACAGTTGGTTATGGGGATGTGTTTGGAAAGAAGTTCTAATGAATAATATCTCAAAAATCTGCTTATTAACTAAAGGAACATGGAAAGGCTATAACCAATCTTTTAAAACAACCAAAGACTAAAAAGTCGAAGCCACACACAGTTGGTTTGAACAACACAAGGATACATCAGATTAAGCGAGTGTTTGGATCGACTTTCTAAGTGTTTATAACTACAAAAAAAAGTTTATAAATACTTGGAAAGTCAATCCAAATGTGCCCTAATTTGTTTTTTTCCTTTAGAAAAAAACTAGATTTAAATTCAAATTCAAATTTATTTCAAATTTCTTGGTTTTTTTTTTGTGCTGATAAAGTTATTTCAAATTTGCATATCATGTTAATCTTTTATTTGTTGTTTTCTTTTTTTGTAGATGAGAATCAAAAAACAAAAGCGGCAACGGAGAGCTGTGAGATTCTACACTACATGCTGTGGATTCAGGTCACCTTTTAAAATCTTTTGCGATGGAACTTTTGTGAACCATCTTCTCTCCAATCAGATAATGCCGGCTGATGAAGCTGTTGCTAAAACCGTTGGTGATAGAGTAAAGCTTTTCACCACCAGGTTTGTTCTTTTTATTGACTGAATCATAAACATTTGACTTGTTATTTTTATTATCTCATAGTTTTGATTTGCAGATGTGTACTCTTAGAGTTGAAGGCTCTTGGCCAATCCTACTCGGGAGCTTTTGAGGCAGCTAGTCAGCTGTTCACTGCAAGGTCTACCACAGGCTTTTTTTTCATCCTTGAATTTGAATAATTTCGCTTCATGGTGACTAGTATCTTAAGTTTGTCACGTTCTTATGGTATTAGCATTTATTGATATGAGGAAGTTGAATTATTTGCTTATTCAATCCTTTTTTTCTGATTTGAAGTTACACTATGGTTTTAGATGCGACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATACTTGATGTGATCAGTGAATCAAATCCTGAGCATTTTTTTGTTGCCACTCAAGATACTAATCTTAGGAAGCAACTTCAACAGGTTTGTGTATTTCATGGATTGATACACGCAAATATTAGTTTTCCATTACACTTGAACACTTTTTGTTTGTTTCAAATTCGATTGTTTCACTTTGCATCTTATGATCAATTCTGACCTAGGTTATGAAATGTTTCTAATTTATGTTTTCTTCTTCTTATTATTATATGCAACCTTTCTGTTGATAAACAGTTCATAATCTAGAATGGAAAAGTTCTGTGGTCTGCAGTTTTGTTTTTCTTGTCATTTTCTGGGGTGTTTGGCTCAAGAGGAGGAATAGAATCTTTAGTGCGGTGATGCCGTGTGATGAGGTTTAGAAGTTGGTGCAGTTAAATGTCTCCTTTTAGGCACTGATTGCTAGGCCTTTTTGTAATTGTGATATTGGTTTGGACTTCCTTGTTGTTTCTGTTTTGACCTTTTTATTAAATGAAAGCTCCGTTTTCTTACCTAAAAAATATATGTTTTCTTATTATATGCCAGGTTGGTTTTGCTTTTCTAACATATGCAGTTTATTTTAAATTCTCTTAAGTTCAAATTATGTAAATCCAAATTGGTAATTTGTGTTATTGTTGGCCATCGTTTTTTTTTTTGTTATATGAATTTATGAAGTGTTGAAATCTTCAACTTGCTGCCATGTCTACCTGTAATTTCTTTTATTTATATGTTTATATGTTACCAGATACCTGGAGTCCCACTCATATTTGGTCTGAGAAATGCACTTTTCATGGAGCAACCCTCTGATGTGCAACGGCAGTTTGTCAAGTCTTTAGAAGAAAAAAGAATGCACGTGTCTGAGGTGGAACGTGATTTATTGAAGAAAAAAACGAAGTATGTAGTGGAAGCTGAGAAAACTAATGAAGATGAAGATTTGGAAGATCAAAATTTAGACACACTGGTTTTGAAAAAGAAAAAGAAGAACATTCCAAGTAATTTGAAAGACCGACCTCAATTTAAAAGAAACAAAGCAAAGGTATTAACTCCACGATTACATTCTCTCTTTATTATAATCTTGATTTTGTGCTTTTATTTGCATTATTGATTGACTAACTTTTTTTTACTAACTTTGGTCTTCATATTTTGGTCACATCTTTTGCTTTCCATTTTGAAAACCATGGAAAATAGTAATAATAATGATTAGGTGTTGTTTAGGCTAGTGTGCCTAGGACTCTAGTTTGATAACAAAAGGCTTTGCACCCAAAGAAAGCTTTTCTTTGTTGGTGTGGTGTCTTTTTTTGTAGGTAGTTCTTGGACTACCATTTGGTTGAGATTGTTTCTTTGTTTGTCTTTGCTTTTCGTTTACTTTCTTTATGTTTAAAATTACTTCGAAGTACTTTCTTTATGTTCAAAATTACTTCAAAACATTCTGTTAGTAATCCACAAAATTTTGATTGCATGAAAATTAGGTTTGAAAGTGTAAAATCAAACATTGAGTGATTAAATGTATGATCAAGAGTGACTTATAATATGACAAAGGTAATTTTAACGATTTATGAAATCACTCTAGTGTGCCCTAATAAAATGTACAATGAGACAATGCTATTTATTGTTTATGGTGCTAGTCTGTTCTTGGTTTCAATTGTTACATGAATATCACGCAAACTAGTTTCCTTGATTTATGAATGCACTTTCATTTTGTAGGGTCCAAACCCTCTTTCATGTTTGAAGAAAAAGGTTAAACCAAGTCCACATCCAGTTTCAGAGAAGGTAATATTTTCATTTACAGTGCTTCTGAATGTCTAGTAGTATATTCTAAAAAATAAGATGATCAAAGTGACATTTTAGTATGAAATGTTGAAATGAGAATTCTTGGCCGAATATAAGGAAGTCTTAAGAAAACATGTTTAAGAAGTGAGTAATAACACAAGAAAGCTATAGAAGAAGTGTTTGTAAGCTTATTATTAAAAACCATAAAACATAAAATAAAATGGTTATTATTAAATAAGGCTAATAGTCTAGTAATTTTTCTTCGAGAGTGACTTCTTAGAAAGTTCGTAAAGATTCATTTTCCCCGATGATATACTTCCGGGAATGCAACTTTTTTTGTTATTTTTTTCTTTAGTTACATCTTGCTACTCTAAACACATTACAATTATCATCCTATATTTATATGAACATATACATGTGTTTGTGGTTGGGATTGAATTACTTTCTTTTTTGTGCATCAGAAGAAGGATGATGATAATGTGGCTCAAAAGCGTACACGGAAACGAAAGCGATCGCGAAAGGCTAAAGCACCTACAGAGACGGTCATGTCATAGTTAGGCTCTTTTTTTGTTGTGCCTTGGGAAATTTTGTTGTTGTGAGGCAAATGGTAGAATGATTTGGTCTTAACTTCTTAGCTGAGGATTTGAAAGTACTTGAGCTACCCATGATCTCAAGTGATCAAAATTTTGAAGATCTATTTCTTCGAACTCAAAAAATACTTTGTCAACGTGTTTAATCAATTATACAGAAGCAAAGGAGATGATTTCGCCGG

mRNA sequence

GATAAATTAAATCCAGATTTAGATAAAAAGGAAAGAAAATTTAAATTTAGGTTTCCTTCTTGGAACCCATCCCCCTCGTTGTCCAGCACCGATCACCGTCCGCCACCCATCGGGCCTCCGTCTCCGTCTGCTACCGAACATTTGCAGCCCGCGCCTCCGCACCCTGGTGACAGCACCGTCACTTTCTCTCTTTATTCCCTAGATTTCTCTCTCCCTCTCTGTATCTAGTTTCTCCCTCGCAGCCATCCACGTCCAGTCGCGCCGCTGCCCGTGGTCGTCAGCCACACCGTCGATCGTCTGCCTTAATCTTGATTATTGGGGCTGACTTTAAAGTCTTGAGGGATAGGAGCTTCTGTCCAACAGATTAAATATCAGCTTCGGTGAAATTTCGGATTTGGCAAACGTTGGGGATAATTGACTTGGGAATAAATTTGCTTGCTTTTTGGGCTCAGTCTCGAGATGAGAATCAAAAAACAAAAGCGGCAACGGAGAGCTGTGAGATTCTACACTACATGCTGTGGATTCAGGTCACCTTTTAAAATCTTTTGCGATGGAACTTTTGTGAACCATCTTCTCTCCAATCAGATAATGCCGGCTGATGAAGCTGTTGCTAAAACCGTTGGTGATAGAGTAAAGCTTTTCACCACCAGATGTGTACTCTTAGAGTTGAAGGCTCTTGGCCAATCCTACTCGGGAGCTTTTGAGGCAGCTAGTCAGCTGTTCACTGCAAGATGCGACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATACTTGATGTGATCAGTGAATCAAATCCTGAGCATTTTTTTGTTGCCACTCAAGATACTAATCTTAGGAAGCAACTTCAACAGATACCTGGAGTCCCACTCATATTTGGTCTGAGAAATGCACTTTTCATGGAGCAACCCTCTGATGTGCAACGGCAGTTTGTCAAGTCTTTAGAAGAAAAAAGAATGCACGTGTCTGAGGTGGAACGTGATTTATTGAAGAAAAAAACGAAGTATGTAGTGGAAGCTGAGAAAACTAATGAAGATGAAGATTTGGAAGATCAAAATTTAGACACACTGGTTTTGAAAAAGAAAAAGAAGAACATTCCAAGTAATTTGAAAGACCGACCTCAATTTAAAAGAAACAAAGCAAAGGGTCCAAACCCTCTTTCATGTTTGAAGAAAAAGGTTAAACCAAGTCCACATCCAGTTTCAGAGAAGAAGAAGGATGATGATAATGTGGCTCAAAAGCGTACACGGAAACGAAAGCGATCGCGAAAGGCTAAAGCACCTACAGAGACGGTCATGTCATAGTTAGGCTCTTTTTTTGTTGTGCCTTGGGAAATTTTGTTGTTGTGAGGCAAATGGTAGAATGATTTGGTCTTAACTTCTTAGCTGAGGATTTGAAAGTACTTGAGCTACCCATGATCTCAAGTGATCAAAATTTTGAAGATCTATTTCTTCGAACTCAAAAAATACTTTGTCAACGTGTTTAATCAATTATACAGAAGCAAAGGAGATGATTTCGCCGG

Coding sequence (CDS)

ATGAGAATCAAAAAACAAAAGCGGCAACGGAGAGCTGTGAGATTCTACACTACATGCTGTGGATTCAGGTCACCTTTTAAAATCTTTTGCGATGGAACTTTTGTGAACCATCTTCTCTCCAATCAGATAATGCCGGCTGATGAAGCTGTTGCTAAAACCGTTGGTGATAGAGTAAAGCTTTTCACCACCAGATGTGTACTCTTAGAGTTGAAGGCTCTTGGCCAATCCTACTCGGGAGCTTTTGAGGCAGCTAGTCAGCTGTTCACTGCAAGATGCGACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATACTTGATGTGATCAGTGAATCAAATCCTGAGCATTTTTTTGTTGCCACTCAAGATACTAATCTTAGGAAGCAACTTCAACAGATACCTGGAGTCCCACTCATATTTGGTCTGAGAAATGCACTTTTCATGGAGCAACCCTCTGATGTGCAACGGCAGTTTGTCAAGTCTTTAGAAGAAAAAAGAATGCACGTGTCTGAGGTGGAACGTGATTTATTGAAGAAAAAAACGAAGTATGTAGTGGAAGCTGAGAAAACTAATGAAGATGAAGATTTGGAAGATCAAAATTTAGACACACTGGTTTTGAAAAAGAAAAAGAAGAACATTCCAAGTAATTTGAAAGACCGACCTCAATTTAAAAGAAACAAAGCAAAGGGTCCAAACCCTCTTTCATGTTTGAAGAAAAAGGTTAAACCAAGTCCACATCCAGTTTCAGAGAAGAAGAAGGATGATGATAATGTGGCTCAAAAGCGTACACGGAAACGAAAGCGATCGCGAAAGGCTAAAGCACCTACAGAGACGGTCATGTCATAG

Protein sequence

MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKLFTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKTKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS*

Homology

[Close]

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot
Match: Q9BRU9 (rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-28
Identity = 91/275 (33.09%), Postives = 140/275 (50.91%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           M+I +QK  ++ + F+    G R P++I  DGTF    L  +I   ++     +G+  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGE-TQL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRK-SAEACILDVISESNPEHFFVA 120
            TTRCVL EL+ LG+   GA   A +     C H K   S   C+L ++ E NP H+FVA
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVA 120

Query: 121 TQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKK 180
           TQD NL  ++++ PGVPL+F ++N + +++PS     FVK++E  ++ VS  E++ +K  
Sbjct: 121 TQDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQL-VSVHEKESIKH- 180

Query: 181 TKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKK 240
                                      K+++ +  N +   + KR K  GPNPLSCLKKK
Sbjct: 181 --------------------------LKEEQGLVKNTEQSRRKKRKKISGPNPLSCLKKK 237

Query: 241 VKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAP 275
                    +K  D  + A ++ RKRKR R    P
Sbjct: 241 ---------KKAPDTQSSASEKKRKRKRIRNRSNP 237

[Close]

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot
Match: Q9CX11 (rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-27
Identity = 93/270 (34.44%), Postives = 142/270 (52.59%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           M+I +QK  ++ + F+    G R P++I  DGTF    L  +I   D+     +G+  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLRDQLPRYLMGE-TQL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRK-SAEACILDVISESNPEHFFVA 120
            TTRCVL EL+ LG+   GA   A +     C H K   S   C+L ++ E NP H+FVA
Sbjct: 61  CTTRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVA 120

Query: 121 TQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKK 180
           TQD NL  ++++ PG+PL+F ++N + +++PS     FVK++E  ++ VS  E+  +K  
Sbjct: 121 TQDQNLSVKVKRTPGIPLMFIIQNTIVLDKPSPRTVAFVKAVEAGQL-VSVHEKQSIK-- 180

Query: 181 TKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKK 240
                   +  E++ L  +N D    ++KKK               K  GPNPLSCLKKK
Sbjct: 181 --------QLKEEQGLV-RNPDLRRRRRKKK---------------KVGGPNPLSCLKKK 233

Query: 241 VKPSPHPVSEKKKDDDNVAQKRTRKRKRSR 270
                    +K +D  + A ++ RKRKR R
Sbjct: 241 ---------KKAQDTKSPASEKKRKRKRIR 233

[Close]

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot
Match: Q08DU1 (rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26
Identity = 86/270 (31.85%), Postives = 141/270 (52.22%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           M+I +QK  ++ + F+    G R P++I  DGTF    L  +I    E + + +    +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQ-LREQLPRYLMAETQL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRK-SAEACILDVISESNPEHFFVA 120
            TTRCVL EL+ LG+   GA   A +     C H K   S   C+L ++ + NP H+F+A
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFLA 120

Query: 121 TQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKK 180
           TQD NL  ++++ PG+PL+F ++N + +++PS     FVK++E  ++ VS  E+  +++ 
Sbjct: 121 TQDQNLSMKVKKKPGIPLMFIIQNTIVLDKPSPKTIAFVKAVESGQL-VSVHEKQSIRQ- 180

Query: 181 TKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKK 240
                                      K+++ +  + + R + KR K  GPNPLSCLKKK
Sbjct: 181 --------------------------LKEEQGLVKDPEQRRRKKRKKVSGPNPLSCLKKK 232

Query: 241 VKPSPHPVSEKKKDDDNVAQKRTRKRKRSR 270
                    +K +D ++ A ++ RKRKR R
Sbjct: 241 ---------KKTQDTNSSASEKKRKRKRIR 232

[Close]

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot
Match: O74862 (rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp23 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 78/277 (28.16%), Postives = 120/277 (43.32%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR K+ K  R+ +  Y    GFR P+++  D  F+   LS Q +    A+A+TV   +K 
Sbjct: 1   MRQKRAKNYRKLMHTYQLLFGFREPYQVLVDADFLKD-LSQQKIDIQAALARTVQGAIKP 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDH-EKRKSAEACILDV--ISESNPEHFF 120
             T+C + +L +           A      RC H ++  S   CI  V  I+  N   + 
Sbjct: 61  MITQCCIRQLYSKSDELKQEIRIAKSFERRRCGHIDEALSPSECIQSVVNINGRNKHRYV 120

Query: 121 VATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLK 180
           VATQD  LR+ L+ +PGVPLI+  R+ + +E  S        + E  +M +S+ E+ LL 
Sbjct: 121 VATQDPELRQALRSVPGVPLIYMKRSVVILEPASRATLLEKHNKESVQMGMSKEEKLLLS 180

Query: 181 KK----TKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPL 240
            K     +  ++ + T E  DL           KK+K                 KGPNPL
Sbjct: 181 GKKRSANELAIDDQDTKESTDLAGTEDSAPKANKKRKG---------------PKGPNPL 240

Query: 241 SCLKKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRK 271
           S  K+  K   H   E     + +     RK+ R ++
Sbjct: 241 SIKKRSSK--NHTTDEPTLPVNIIGDVGERKKHRRKR 259

[Close]

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot
Match: Q12339 (rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP23 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.4e-13
Identity = 79/275 (28.73%), Postives = 127/275 (46.18%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR K+ K  R+ +  Y+    FR P+++  D   V    +N        + +T+   VK+
Sbjct: 1   MRQKRAKSYRKQLLVYSHTFKFREPYQVLVDNQLVLE-CNNSNFNLPSGLKRTLQADVKV 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKR--KSAEACILDV--ISESNPEHF 120
             T+C +  L        GA   A Q    RC+H  +  KS   CI  V  IS +N   +
Sbjct: 61  MITQCCIQALYETRN--DGAINLAKQFERRRCNHSFKDPKSPAECIESVVNISGANKHRY 120

Query: 121 FVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLL 180
            VA+QD +LR++L+ +PGVPLI   R+ + ME  S    +  K  EE++++    + ++ 
Sbjct: 121 VVASQDIDLRRKLRTVPGVPLIHLTRSVMVMEPLSTASAKASKITEEQKLYKGLNDPNI- 180

Query: 181 KKKTKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCL 240
                     EK  E  D   +   T    KK+K  P              K PNPLS  
Sbjct: 181 ----------EKLQESGDGSGKESIT----KKRKLGP--------------KAPNPLSVK 240

Query: 241 KKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKA 272
           KKK   SP   S++ KD ++ ++++ ++R+R  K+
Sbjct: 241 KKKKVNSP---SDEVKDKEDTSKEKKKRRRRKHKS 240

[Close]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL
Match: A0A1S3CNY6 (rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 265/280 (94.64%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MRIKKQKRQRRAVRFYTTCCGFR PFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALGQSY+GAFEAASQLFTARCDHEKRKSAEACILDVI ESNPEHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDTNLRKQLQQIPGVPLIFGLRN LFMEQPSDVQRQFVKSLEEKRMH+SE ERDLLKKK 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
           KYVVEAEKTNEDEDL DQNLD  VL KKKKNI SNLKDRPQFKRNKAKGPNPLSCLKKKV
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVL-KKKKNILSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KPSPHPVSEKKKDDD++AQKRTRKRKRSRKAKAPTETV S
Sbjct: 241 KPSPHPVSEKKKDDDDLAQKRTRKRKRSRKAKAPTETVTS 279

[Close]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL
Match: A0A0A0KTT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466330 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 44  MPADEAVAKTVGDRVKLFTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEAC 103
           MPADEAVAKTVGDRVKLFTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEAC
Sbjct: 1   MPADEAVAKTVGDRVKLFTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEAC 60

Query: 104 ILDVISESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEE 163
           ILDVI ESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEE
Sbjct: 61  ILDVIGESNPEHFFVATQDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEE 120

Query: 164 KRMHVSEVERDLLKKKTKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFK 223
           KRMHVSEVERDLLKKKTKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFK
Sbjct: 121 KRMHVSEVERDLLKKKTKYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFK 180

Query: 224 RNKAKGPNPLSCLKKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS 281
           RNKAKGPNPLSCLKKKVKPSPHPVSEKKKDDD+VAQKRTRKRKRSRKAKAPTETVMS
Sbjct: 181 RNKAKGPNPLSCLKKKVKPSPHPVSEKKKDDDSVAQKRTRKRKRSRKAKAPTETVMS 237

[Close]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL
Match: A0A6J1CLD6 (rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC111012016 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101
Identity = 201/279 (72.04%), Postives = 234/279 (83.87%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR K+QKR RR VRFY  C GFR PFK+ CDGTFV+HLLSN+I+PAD A+AKT+G  +KL
Sbjct: 1   MRFKRQKRHRRVVRFYAACFGFRQPFKVLCDGTFVHHLLSNRIVPADNALAKTIGGPIKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVL ELKALGQSYS AF+AAS+L  ARCDHE+RKSAEACI DVI ESN EHFFVAT
Sbjct: 61  FTTRCVLSELKALGQSYSEAFDAASRLLIARCDHERRKSAEACISDVIGESNAEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDT+LRK+LQ+IPGVPL++GLRNALFMEQPS +QRQFVKS EE+R+H+SE+ERDLLKK+ 
Sbjct: 121 QDTDLRKKLQEIPGVPLVYGLRNALFMEQPSVLQRQFVKSSEEERLHMSELERDLLKKR- 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
           KY VE E+TNED  L DQNL+T  +KK+  +  + LKD+ QFKR KAKGPNPLSC KKK 
Sbjct: 181 KYRVETEETNEDRGLGDQNLETQAMKKRSTS--NELKDKIQFKRKKAKGPNPLSCKKKKE 240

Query: 241 KPSPHPVSEK-KKDDDNVAQKRTRKRKRSRKAKAPTETV 279
            PS HPVSEK KKD+D+ A+ RTRKRKRSRKAK P  T+
Sbjct: 241 NPSQHPVSEKHKKDNDSAAESRTRKRKRSRKAKMPATTM 276

[Close]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL
Match: A0A6J1JT87 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.4e-95
Identity = 200/282 (70.92%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR KKQKR R+AVRFYTTC GFR PFK+ CDGTFV+HLLSNQI+PAD A+AK +G RVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALG SYS AFEAAS L TARCDHE RK A  CI++VI +SN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDT+L+KQLQ+IPGVPLIFGLRNALFMEQP+ ++RQFVKS EEKR H+SEVE +LL+K T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 K-YVVEAEKTNEDEDLEDQNLDTLVL--KKKKKNIPSNLKDRPQFKRNKAKGPNPLSCL- 240
           K    E E TNED DL  +N +  VL  KKKK+   ++LKDRPQFKR K KGPNPLSCL 
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 -KKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTET 278
            KKKV P+ HPVSEKK DD+    KRTRKRKR+RK K   ET
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTT--KRTRKRKRARKTKTTAET 280

[Close]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL
Match: A0A6J1E579 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.4e-95
Identity = 200/282 (70.92%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR KKQKR R+AVRFYTTC GFR PFK+ CDGTFV+HLLSNQI+PAD A+AK +G RVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALG SYS AFEAAS L TARCDHE RK A  CI++VI +SN EHFFVAT
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDT+L+KQLQ+IPGVPLIFGLRNALFMEQP+ ++RQFVKS EEKR H+SEVE +LL+K T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 K-YVVEAEKTNEDEDLEDQNLDTLVL--KKKKKNIPSNLKDRPQFKRNKAKGPNPLSCL- 240
           K    E E TNED DL  +N +  VL  KKKK+   ++LKDRPQFKR K KGPNPLSCL 
Sbjct: 181 KDDEEETEITNEDGDLVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLK 240

Query: 241 -KKKVKPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTET 278
            KKKV P+ HPVSEKK DD+    KRTRKRKR+RK K   ET
Sbjct: 241 KKKKVDPNQHPVSEKKADDNTT--KRTRKRKRARKTKTTAET 280

[Close]

BLAST of CSPI05G15940 vs. NCBI nr
Match: XP_004143766.1 (rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655274.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742195.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742196.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742197.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_031742198.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >KAE8648473.1 hypothetical protein Csa_007759 [Cucumis sativus])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 277/280 (98.93%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MRIKKQKRQRRAVRFYTTCCGFR PFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVI ESNPEHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
           KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KPSPHPVSEKKKDDD+VAQKRTRKRKRSRKAKAPTETVMS
Sbjct: 241 KPSPHPVSEKKKDDDSVAQKRTRKRKRSRKAKAPTETVMS 280

[Close]

BLAST of CSPI05G15940 vs. NCBI nr
Match: XP_011655276.1 (rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 527.7 bits (1358), Expect = 6.1e-146
Identity = 276/280 (98.57%), Postives = 277/280 (98.93%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MRIKKQKRQRRAVRFYTTCCGFR PFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVI ESNPEHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
           KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV
Sbjct: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KPSPHPVSE KKDDD+VAQKRTRKRKRSRKAKAPTETVMS
Sbjct: 241 KPSPHPVSE-KKDDDSVAQKRTRKRKRSRKAKAPTETVMS 279

[Close]

BLAST of CSPI05G15940 vs. NCBI nr
Match: XP_008465424.1 (PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465440.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465448.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465455.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465460.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 3.2e-139
Identity = 265/280 (94.64%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MRIKKQKRQRRAVRFYTTCCGFR PFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCVLLELKALGQSY+GAFEAASQLFTARCDHEKRKSAEACILDVI ESNPEHFFVAT
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QDTNLRKQLQQIPGVPLIFGLRN LFMEQPSDVQRQFVKSLEEKRMH+SE ERDLLKKK 
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
           KYVVEAEKTNEDEDL DQNLD  VL KKKKNI SNLKDRPQFKRNKAKGPNPLSCLKKKV
Sbjct: 181 KYVVEAEKTNEDEDLGDQNLDAQVL-KKKKNILSNLKDRPQFKRNKAKGPNPLSCLKKKV 240

Query: 241 KPSPHPVSEKKKDDDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KPSPHPVSEKKKDDD++AQKRTRKRKRSRKAKAPTETV S
Sbjct: 241 KPSPHPVSEKKKDDDDLAQKRTRKRKRSRKAKAPTETVTS 279

[Close]

BLAST of CSPI05G15940 vs. NCBI nr
Match: XP_038906639.1 (rRNA-processing protein UTP23 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 421.0 bits (1081), Expect = 8.0e-114
Identity = 222/285 (77.89%), Postives = 248/285 (87.02%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           M IKKQKRQRRAVRFYTTCCGFR PFKIF DGTFV+HL+SNQIMPAD+A+AKTVGD+VKL
Sbjct: 1   MGIKKQKRQRRAVRFYTTCCGFRPPFKIFLDGTFVHHLISNQIMPADDAIAKTVGDKVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FT+RCV LEL+ALGQSYS  FEAA+QLFTARC+H +RKSAEACI DVI ESNPEHFF+AT
Sbjct: 61  FTSRCVRLELRALGQSYSRTFEAANQLFTARCNHVQRKSAEACIRDVIGESNPEHFFLAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QD NLR+QL++IPGVPLI+GLRNALFMEQPSDVQRQFVKSLEE+RMH+SE ER LLK+K 
Sbjct: 121 QDANLRQQLREIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHMSEAERSLLKRKR 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVL--KKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKK 240
           KY VE++KTN  ED  DQN +  V   KKKKK+IP+N+ DR QFKRNKAKGPNPLSCLKK
Sbjct: 181 KYEVESDKTNGPEDFGDQNSEPQVFEKKKKKKSIPNNMIDRAQFKRNKAKGPNPLSCLKK 240

Query: 241 KVKPSPHPVSEKKKD---DDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KVKPS HPV+EKKKD   D N A K+TRKRKRSRK K PTE V S
Sbjct: 241 KVKPSSHPVAEKKKDDGNDGNAAPKQTRKRKRSRKGKEPTENVAS 285

[Close]

BLAST of CSPI05G15940 vs. NCBI nr
Match: XP_038906640.1 (rRNA-processing protein UTP23 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-113
Identity = 221/284 (77.82%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           M IKKQKRQRRAVRFYTTCCGFR PFKIF DGTFV+HL+SNQIMPAD+A+AKTVGD+VKL
Sbjct: 1   MGIKKQKRQRRAVRFYTTCCGFRPPFKIFLDGTFVHHLISNQIMPADDAIAKTVGDKVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FT+RCV LEL+ALGQSYS  FEAA+QLFTARC+H +RKSAEACI DVI ESNPEHFF+AT
Sbjct: 61  FTSRCVRLELRALGQSYSRTFEAANQLFTARCNHVQRKSAEACIRDVIGESNPEHFFLAT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QD NLR+QL++IPGVPLI+GLRNALFMEQPSDVQRQFVKSLEE+RMH+SE ER LLK+K 
Sbjct: 121 QDANLRQQLREIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHMSEAERSLLKRKR 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVL--KKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKK 240
           KY VE++KTN  ED  DQN +  V   KKKKK+IP+N+ DR QFKRNKAKGPNPLSCLKK
Sbjct: 181 KYEVESDKTNGPEDFGDQNSEPQVFEKKKKKKSIPNNMIDRAQFKRNKAKGPNPLSCLKK 240

Query: 241 KVKPSPHPVSEKKKD--DDNVAQKRTRKRKRSRKAKAPTETVMS 281
           KVKPS HPV+EKK D  D N A K+TRKRKRSRK K PTE V S
Sbjct: 241 KVKPSSHPVAEKKDDGNDGNAAPKQTRKRKRSRKGKEPTENVAS 284

[Close]

BLAST of CSPI05G15940 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 136/285 (47.72%), Postives = 190/285 (66.67%), Query Frame = 0


Query: 1   MRIKKQKRQRRAVRFYTTCCGFRSPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60
           MR+K+QK+ RR VRF+T C GFR P+K+ CDGTFV+HL++N+I PAD AV++ +G  VKL
Sbjct: 1   MRVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKL 60

Query: 61  FTTRCVLLELKALGQSYSGAFEAASQLFTARCDHEKRKSAEACILDVISESNPEHFFVAT 120
           FTTRCV+ EL+ LG+ ++ + EAA  L TA C+HE+ K+A+ C+ +VI   N EHFF+ T
Sbjct: 61  FTTRCVIAELEKLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGT 120

Query: 121 QDTNLRKQLQQIPGVPLIFGLRNALFMEQPSDVQRQFVKSLEEKRMHVSEVERDLLKKKT 180
           QD   R++LQQ   VPL+FGLRN L ++QPSD QRQ  K  E KR+ +++ E+ LL K+T
Sbjct: 121 QDAEFRRKLQQESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLLVKRT 180

Query: 181 KYVVEAEKTNEDEDLEDQNLDTLVLKKKKKNIPSNLKDRPQFKRNKAKGPNPLSCLKKKV 240
             ++ + +       E+  +  +V  K    +    KDRPQFKRN+AKGPNPLSC+KKK 
Sbjct: 181 AKIIASNRKEATIANEEWGMPRVVSTKNGLGV----KDRPQFKRNRAKGPNPLSCMKKK- 240

Query: 241 KPSPHPVSEKKKDDDNVAQK---------RTRKRKRSRKAKAPTE 277
               +P S+ K D ++ AQK         + R RKRS+K K+  E
Sbjct: 241 --KENPQSKSKADSNSNAQKEKKEGGSDTQKRSRKRSKKGKSGPE 278

[Close]

BLAST of CSPI05G15940 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-08
Identity = 35/117 (29.91%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 25  PFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKLFTTRCVLLELKALGQSYSGAFEAA 84
           P+++  D  F+N  + N+I   ++ +   +        T CV+ EL+ LGQ Y  A   A
Sbjct: 62  PYRVLVDTNFINFSIQNKI-DLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIA 121

Query: 85  SQLFTAR--CDHEKRKSAEACILDVISESNPEHFFVATQDTNLRKQLQQIPGVPLIF 140
                 R  C H K   A+ C++D +++   + F VAT D +L++++++IPGVP+++
Sbjct: 122 KDPHFERLPCIH-KGTYADDCLVDRVTQH--KCFIVATCDRDLKRRIRKIPGVPIMY 174

The following BLAST results are available for this feature:

BLAST of CSPI05G15940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BRU9	4.1e-28	33.09	rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2	[more]
Q9CX11	2.7e-27	34.44	rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=...	[more]
Q08DU1	1.0e-26	31.85	rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1	[more]
O74862	1.5e-14	28.16	rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
Q12339	6.4e-13	28.73	rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]

BLAST of CSPI05G15940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CNY6	1.6e-139	94.64	rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE...	[more]
A0A0A0KTT8	1.1e-121	99.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466330 PE=4 SV=1	[more]
A0A6J1CLD6	1.7e-101	72.04	rRNA-processing protein UTP23 homolog OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1JT87	1.4e-95	70.92	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E579	1.4e-95	70.92	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of CSPI05G15940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143766.1	1.1e-147	98.93	rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus] >XP_011655273...	[more]
XP_011655276.1	6.1e-146	98.57	rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]	[more]
XP_008465424.1	3.2e-139	94.64	PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo] >XP_008465433.1 ...	[more]
XP_038906639.1	8.0e-114	77.89	rRNA-processing protein UTP23 homolog isoform X1 [Benincasa hispida]	[more]
XP_038906640.1	3.0e-113	77.82	rRNA-processing protein UTP23 homolog isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI05G15940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34570.1	1.1e-65	47.72	PIN domain-like family protein	[more]
AT2G46230.1	1.7e-08	29.91	PIN domain-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 53..149 e-value: 2.1E-26 score: 92.1
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..156 e-value: 1.3E-47 score: 163.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..261
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 1..275
None	No IPR available	PANTHER	PTHR12416:SF3	RRNA-PROCESSING PROTEIN UTP23 HOMOLOG	coord: 1..275
None	No IPR available	CDD	cd08553	PIN_Fcf1-like	coord: 26..148 e-value: 5.5322E-52 score: 164.291
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 25..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G15940.1	CSPI05G15940.1	mRNA
CSPI05G15940.2	CSPI05G15940.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome