CSPI05G12940 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G12940
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Zinc finger, CCHC-type
Location	Chr5: 12333306 .. 12334547 (+)
RNA-Seq Expression	CSPI05G12940
Synteny	CSPI05G12940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAGGACACAGATTTGGTGGTACCGATCAAGGAAGATGGCGAGGACGTGGTCGTGGCACTGAGCGTCAAAATAGTGCGAGAGGCACTAGCAACACTAGAAATGGCACTCGTGATAAAAGTCACATTAAGTTTTTCACTTGCAACAAGATGGGACATTACGCGTCAGAATGTCATGGAAAAGATCATGACGACGAAGCTCATCTAACTTGTGCTGTCGAAGAAGAACCAGGTTTGATGATGGCCGTGTCCCAGGAGGGGACATGCCTTAGATGTGATCAGAAGGATGTCATACTACTCAACAAAGAGCGGTTGTTGCCAGAGATGTATTGCAACGACCAGAATGGAGAAAATAATGATGTTTGGTATCTTAACAACGGTGCTAGTAACCACATGACTGGCCCCCGTGAGACGTTCCAAGAATTAGATGAAAGCTTCACTAGGAGAGTGAAATTTGACGATGGATCAACCATTCAGATCATGGGAAAAGGAACGGTCATGTTCGAGTGCAAGAACAGTGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCCAAAGTCCTGTAGGAACATCATTAGCCTCAGACAAATGACAGAAAATGAAAACAAGGTACAAATGACAGAAGATGTCATGAAAATGTCTGACAGGAGTGGGAAGCTTTTGATGTCGGTGAAGCGAACTCAAAAATATTTATACAAGATAACTTTGAAGACGCTCAAGCAAGTCTGCCTTCTGACAAGCCTAAAAGATCCAACATGGTTATGGCACGTGAGACTTGGTCATGTAAATTTTTATGACTTGAAGCTCATAAGGGAGAAGAAATTGGTAGTTGGAGTACCACTAGTGACTCAACCGAACAAGTTATGTGAAGCGTGCGTGATTACCAAACAAGTCAGATTGCCTTTCCACCGTCAATCAACATATAGAGTAGAGAAGCCATTAGAACTCCTCCATGCTGATATATGCGGACCGATTTCACCATGTACTCTTGCTGGAAACAAGTATTTTCTGTTGATTGTTGACGATTCCACGAGATGGATGTGGATGTATATGTTGGAGGCAAAAAGTGACGCATTTGAAGCATTCAAGAAATGCAAACTCTTAATGGAGAACAAGACGGAGTACAAGATCAAAACGCTCCAGACGGATCGAGGTGGTGAGTTCTTATCTGCAGGGTTCACTCAATTTTGCAAAAAAGAAGGAATCCAAGGACACCTCATCGCTCCATATTCACCATAA

mRNA sequence

ATGAACAAAGGACACAGATTTGGTGGTACCGATCAAGGAAGATGGCGAGGACGTGGTCGTGGCACTGAGCGTCAAAATAGTGCGAGAGGCACTAGCAACACTAGAAATGGCACTCGTGATAAAAGTCACATTAAGTTTTTCACTTGCAACAAGATGGGACATTACGCGTCAGAATGTCATGGAAAAGATCATGACGACGAAGCTCATCTAACTTGTGCTGTCGAAGAAGAACCAGGTTTGATGATGGCCGTGTCCCAGGAGGGGACATGCCTTAGATGTGATCAGAAGGATGTCATACTACTCAACAAAGAGCGGTTGTTGCCAGAGATGTATTGCAACGACCAGAATGGAGAAAATAATGATGTTTGGTATCTTAACAACGGTGCTAGTAACCACATGACTGGCCCCCGTGAGACGTTCCAAGAATTAGATGAAAGCTTCACTAGGAGAGTGAAATTTGACGATGGATCAACCATTCAGATCATGGGAAAAGGAACGGTCATGTTCGAGTGCAAGAACAGTGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCCAAAGTCCTGTAGGAACATCATTAGCCTCAGACAAATGACAGAAAATGAAAACAAGGTACAAATGACAGAAGATGTCATGAAAATGTCTGACAGGAGTGGGAAGCTTTTGATGTCGGTGAAGCGAACTCAAAAATATTTATACAAGATAACTTTGAAGACGCTCAAGCAAGTCTGCCTTCTGACAAGCCTAAAAGATCCAACATGGTTATGGCACGTGAGACTTGGTCATGTAAATTTTTATGACTTGAAGCTCATAAGGGAGAAGAAATTGGTAGTTGGAGTACCACTAGTGACTCAACCGAACAAGTTATGTGAAGCGTGCGTGATTACCAAACAAGTCAGATTGCCTTTCCACCGTCAATCAACATATAGAGTAGAGAAGCCATTAGAACTCCTCCATGCTGATATATGCGGACCGATTTCACCATGTACTCTTGCTGGAAACAAGTATTTTCTGTTGATTGTTGACGATTCCACGAGATGGATGTGGATGTATATGTTGGAGGCAAAAAGTGACGCATTTGAAGCATTCAAGAAATGCAAACTCTTAATGGAGAACAAGACGGAGTACAAGATCAAAACGCTCCAGACGGATCGAGGTGGTGAGTTCTTATCTGCAGGGTTCACTCAATTTTGCAAAAAAGAAGGAATCCAAGGACACCTCATCGCTCCATATTCACCATAA

Coding sequence (CDS)

ATGAACAAAGGACACAGATTTGGTGGTACCGATCAAGGAAGATGGCGAGGACGTGGTCGTGGCACTGAGCGTCAAAATAGTGCGAGAGGCACTAGCAACACTAGAAATGGCACTCGTGATAAAAGTCACATTAAGTTTTTCACTTGCAACAAGATGGGACATTACGCGTCAGAATGTCATGGAAAAGATCATGACGACGAAGCTCATCTAACTTGTGCTGTCGAAGAAGAACCAGGTTTGATGATGGCCGTGTCCCAGGAGGGGACATGCCTTAGATGTGATCAGAAGGATGTCATACTACTCAACAAAGAGCGGTTGTTGCCAGAGATGTATTGCAACGACCAGAATGGAGAAAATAATGATGTTTGGTATCTTAACAACGGTGCTAGTAACCACATGACTGGCCCCCGTGAGACGTTCCAAGAATTAGATGAAAGCTTCACTAGGAGAGTGAAATTTGACGATGGATCAACCATTCAGATCATGGGAAAAGGAACGGTCATGTTCGAGTGCAAGAACAGTGATCAGAAGGCTCTCCAAGAGGTGTATTACATTCCAAAGTCCTGTAGGAACATCATTAGCCTCAGACAAATGACAGAAAATGAAAACAAGGTACAAATGACAGAAGATGTCATGAAAATGTCTGACAGGAGTGGGAAGCTTTTGATGTCGGTGAAGCGAACTCAAAAATATTTATACAAGATAACTTTGAAGACGCTCAAGCAAGTCTGCCTTCTGACAAGCCTAAAAGATCCAACATGGTTATGGCACGTGAGACTTGGTCATGTAAATTTTTATGACTTGAAGCTCATAAGGGAGAAGAAATTGGTAGTTGGAGTACCACTAGTGACTCAACCGAACAAGTTATGTGAAGCGTGCGTGATTACCAAACAAGTCAGATTGCCTTTCCACCGTCAATCAACATATAGAGTAGAGAAGCCATTAGAACTCCTCCATGCTGATATATGCGGACCGATTTCACCATGTACTCTTGCTGGAAACAAGTATTTTCTGTTGATTGTTGACGATTCCACGAGATGGATGTGGATGTATATGTTGGAGGCAAAAAGTGACGCATTTGAAGCATTCAAGAAATGCAAACTCTTAATGGAGAACAAGACGGAGTACAAGATCAAAACGCTCCAGACGGATCGAGGTGGTGAGTTCTTATCTGCAGGGTTCACTCAATTTTGCAAAAAAGAAGGAATCCAAGGACACCTCATCGCTCCATATTCACCATAA

Protein sequence

MNKGHRFGGTDQGRWRGRGRGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGHYASECHGKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENNDVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKITLKTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP*

Homology

[Close]

BLAST of CSPI05G12940 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-33
Identity = 105/414 (25.36%), Postives = 197/414 (47.58%), Query Frame = 0


Query: 17  GRGRGTERQNSARGTSNTRNGTRDKSHIKF---FTCNKMGHYASEC----------HGKD 76
           GRGR  +R ++  G S  R  ++++S  +    + CN+ GH+  +C           G+ 
Sbjct: 200 GRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQK 259

Query: 77  HDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENNDVW 136
           +DD  +    V+    +++ +++E  C+                        +G  ++ W
Sbjct: 260 NDD--NTAAMVQNNDNVVLFINEEEECMHL----------------------SGPESE-W 319

Query: 137 YLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQEVY 196
            ++  AS+H T  R+ F          VK  + S  +I G G +  +        L++V 
Sbjct: 320 VVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVR 379

Query: 197 YIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKITLKTLKQV 256
           ++P    N+IS   +  +  +        +++  S  +   V R   Y      +T  ++
Sbjct: 380 HVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLY------RTNAEI 439

Query: 257 CL--LTSLKD--PTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQV 316
           C   L + +D     LWH R+GH++   L+++ +K L+      T   K C+ C+  KQ 
Sbjct: 440 CQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTV--KPCDYCLFGKQH 499

Query: 317 RLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDA 376
           R+ F + S+ R    L+L+++D+CGP+   ++ GNKYF+  +DD++R +W+Y+L+ K   
Sbjct: 500 RVSF-QTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQV 559

Query: 377 FEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
           F+ F+K   L+E +T  K+K L++D GGE+ S  F ++C   GI+     P +P
Sbjct: 560 FQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTP 579

[Close]

BLAST of CSPI05G12940 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 1.0e-27
Identity = 84/307 (27.36%), Postives = 150/307 (48.86%), Query Frame = 0


Query: 113 NDQNGENNDVWYLNNGASNHMTGPRETFQELDESF--TRRVKFDDGSTIQIMGKGTVMFE 172
           N+ +  +N  + L++GAS+H+      + +  E     +      G  I    +G V   
Sbjct: 279 NNTSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIV--R 338

Query: 173 CKNSDQKALQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQK 232
            +N  +  L++V +  ++  N++S++++ E    ++  +  + +S      LM VK +  
Sbjct: 339 LRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNG---LMVVKNS-G 398

Query: 233 YLYKITLKTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPN--- 292
            L  + +   +   +    K+   LWH R GH++   L  I+ K +     L+       
Sbjct: 399 MLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSC 458

Query: 293 KLCEACVITKQVRLPFHR-QSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTR 352
           ++CE C+  KQ RLPF + +    +++PL ++H+D+CGPI+P TL    YF++ VD  T 
Sbjct: 459 EICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTH 518

Query: 353 WMWMYMLEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGH 412
           +   Y+++ KSD F  F+      E     K+  L  D G E+LS    QFC K+GI  H
Sbjct: 519 YCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYH 578

Query: 413 LIAPYSP 414
           L  P++P
Sbjct: 579 LTVPHTP 579

[Close]

BLAST of CSPI05G12940 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-22
Identity = 87/303 (28.71%), Postives = 145/303 (47.85%), Query Frame = 0


Query: 119 NNDVWYLNNGASNHMTGPRETFQELDESFT--RRVKFDDGSTIQIMGKGTVMFECKNSDQ 178
           N + W L++GA++H+T          + +T    V   DGSTI I   G+      +S  
Sbjct: 306 NANNWLLDSGATHHITSDFNNL-SFHQPYTGGDDVMIADGSTIPITHTGSASLP-TSSRS 365

Query: 179 KALQEVYYIPKSCRNIISL-RQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKI 238
             L +V Y+P   +N+IS+ R    N   V+      ++ D +  + +   +T+  LY+ 
Sbjct: 366 LDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEW 425

Query: 239 TLKTLKQVCLLTS--LKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKL--CE 298
            + + + V +  S   K     WH RLGH +   L  +        +P++   +KL  C 
Sbjct: 426 PIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNH---SLPVLNPSHKLLSCS 485

Query: 299 ACVITKQVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGN-KYFLLIVDDSTRWMWM 358
            C I K  ++PF   ST    KPLE +++D+    SP     N +Y+++ VD  TR+ W+
Sbjct: 486 DCFINKSHKVPF-SNSTITSSKPLEYIYSDVWS--SPILSIDNYRYYVIFVDHFTRYTWL 545

Query: 359 YMLEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAP 414
           Y L+ KS   + F   K L+EN+ + +I TL +D GGEF+      +  + GI      P
Sbjct: 546 YPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVV--LRDYLSQHGISHFTSPP 598

[Close]

BLAST of CSPI05G12940 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 86/306 (28.10%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 123 WYLNNGASNHMTGPRETFQELDESFT--RRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 182
           W L++GA++H+T        L + +T    V   DGSTI I   G+     K S    L 
Sbjct: 331 WLLDSGATHHITSDFNNL-SLHQPYTGGDDVMVADGSTIPISHTGSTSLSTK-SRPLNLH 390

Query: 183 EVYYIPKSCRNIISL-RQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKITLKT 242
            + Y+P   +N+IS+ R    N   V+      ++ D +  + +   +T+  LY+  + +
Sbjct: 391 NILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS 450

Query: 243 LKQVCLLT--SLKDPTWLWHVRLGH---------VNFYDLKLIREKKLVVGVPLVTQPNK 302
            + V L    S K     WH RLGH         ++ Y L ++      +          
Sbjct: 451 SQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLS--------- 510

Query: 303 LCEACVITKQVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGN-KYFLLIVDDSTRW 362
            C  C+I K  ++PF  QST    +PLE +++D+    SP     N +Y+++ VD  TR+
Sbjct: 511 -CSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWS--SPILSHDNYRYYVIFVDHFTRY 570

Query: 363 MWMYMLEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHL 414
            W+Y L+ KS   E F   K L+EN+ + +I T  +D GGEF++    ++  + GI    
Sbjct: 571 TWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHLT 619

[Close]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL
Match: B8BDZ6 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 2.7e-111
Identity = 203/414 (49.03%), Postives = 284/414 (68.60%), Query Frame = 0


Query: 4   GHRFGGTDQGRWRGRGRGTERQNSAR--GTSNTRNGTRDKSHIKFFTCNKMGHYASEC-H 63
           G+R  G  +GR RGRG G  R ++ R  G   +  G RDKSHIK + C + GHY+++C H
Sbjct: 246 GNRAQG-GRGRGRGRGGGGGRSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPH 305

Query: 64  GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENN 123
            K    EAHL    +  P L++AV+++      +    +++++ER+ P++   D      
Sbjct: 306 PKKKKVEAHLAQTDDANPALLLAVTED------EPASGLVVHEERVWPQLLLADSGAATG 365

Query: 124 DVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 183
           D+W+L+NGASNHMTG R  F++LD S T  VKF D ST++I GKG+++F CKN DQ  LQ
Sbjct: 366 DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQ 425

Query: 184 EVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSG-KLLMSVKRTQKYLYKITLKT 243
           +V+YIP  C N++SL Q+TE  ++V M EDV+++ D+S  +L+M V+RT   LY+I LK 
Sbjct: 426 DVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKL 485

Query: 244 LKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQV 303
              VCLLT + +P WLWH RLGHVNF  +KL+ +K +  G+P +T PN+LC+AC++ KQ+
Sbjct: 486 ATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQI 545

Query: 304 RLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDA 363
           R PF   + +R E+PLELLH D+CGPI+P T+AGN+YF+LIVDD +RWMWM++++ K  A
Sbjct: 546 RQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQA 605

Query: 364 FEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
            EAF K K L EN    +IKTL++DRGGEFLS  F Q C++ GIQ HL APYSP
Sbjct: 606 LEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSP 652

[Close]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL
Match: Q0J8A6 (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110
Identity = 202/416 (48.56%), Postives = 285/416 (68.51%), Query Frame = 0


Query: 2   NKGHRFGGTDQGRWRGRGRGTERQNSAR--GTSNTRNGTRDKSHIKFFTCNKMGHYASEC 61
           ++G+R  G  +GR RG G G  R ++ R  G   +  G RDKSHIK + C + GHY+++C
Sbjct: 244 DRGNRAQG-GRGRGRGHGGGGGRGSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQC 303

Query: 62  -HGKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGE 121
            H K    EAHL    +  P L++AV+++      +    +++++ER+ P++   D    
Sbjct: 304 PHPKKKKVEAHLAQTDDANPALLLAVTED------EPASGLVVHEERVWPQLLLADSGAA 363

Query: 122 NNDVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKA 181
             D+W+L+NGASNHMTG R  F++LD S T  VKF D ST++I GKG+++F CKN DQ  
Sbjct: 364 TGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWL 423

Query: 182 LQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSG-KLLMSVKRTQKYLYKITL 241
           LQ+V+YIP  C N++SL Q+TE  ++V M EDV+++ D+S  +L+M V+RT   LY+I L
Sbjct: 424 LQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIEL 483

Query: 242 KTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITK 301
           K    VCLLT + +P WLWH RLGHVNF  +KL+ +K +  G+P +T PN+LC+AC++ K
Sbjct: 484 KLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAK 543

Query: 302 QVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKS 361
           Q+R PF   + +R E+PLELLH D+CGPI+P T+AGN+YF+LIVDD +RWMWM++++ K 
Sbjct: 544 QIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKD 603

Query: 362 DAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
            A EAF K K L EN    +IKTL++DRGGEFLS  F Q C++ GIQ HL APYSP
Sbjct: 604 QALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSP 652

[Close]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL
Match: A0A0P0XB91 (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110
Identity = 202/416 (48.56%), Postives = 285/416 (68.51%), Query Frame = 0


Query: 2   NKGHRFGGTDQGRWRGRGRGTERQNSAR--GTSNTRNGTRDKSHIKFFTCNKMGHYASEC 61
           ++G+R  G  +GR RG G G  R ++ R  G   +  G RDKSHIK + C + GHY+++C
Sbjct: 244 DRGNRAQG-GRGRGRGHGGGGGRGSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQC 303

Query: 62  -HGKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGE 121
            H K    EAHL    +  P L++AV+++      +    +++++ER+ P++   D    
Sbjct: 304 PHPKKKKVEAHLAQTDDANPALLLAVTED------EPASGLVVHEERVWPQLLLADSGAA 363

Query: 122 NNDVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKA 181
             D+W+L+NGASNHMTG R  F++LD S T  VKF D ST++I GKG+++F CKN DQ  
Sbjct: 364 TGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWL 423

Query: 182 LQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSG-KLLMSVKRTQKYLYKITL 241
           LQ+V+YIP  C N++SL Q+TE  ++V M EDV+++ D+S  +L+M V+RT   LY+I L
Sbjct: 424 LQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIEL 483

Query: 242 KTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITK 301
           K    VCLLT + +P WLWH RLGHVNF  +KL+ +K +  G+P +T PN+LC+AC++ K
Sbjct: 484 KLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAK 543

Query: 302 QVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKS 361
           Q+R PF   + +R E+PLELLH D+CGPI+P T+AGN+YF+LIVDD +RWMWM++++ K 
Sbjct: 544 QIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKD 603

Query: 362 DAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
            A EAF K K L EN    +IKTL++DRGGEFLS  F Q C++ GIQ HL APYSP
Sbjct: 604 QALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSP 652

[Close]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL
Match: Q7XMW2 (OSJNBb0040D15.12 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0040D15.12 PE=4 SV=2)

HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107
Identity = 199/404 (49.26%), Postives = 273/404 (67.57%), Query Frame = 0


Query: 13  GRWRGRGRGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGHYASEC-HGKDHDDEAHLT 72
           GR RGRGRG     S+ G+S      RDKSHIK F C + GHY+++C H K    EAHL 
Sbjct: 62  GRGRGRGRGRGGTQSSGGSSGGGGSGRDKSHIKCFNCEEFGHYSTQCPHPKKKKAEAHLA 121

Query: 73  CAVEEEPGLMMAVSQEGTCLRC-DQKDVILLNKERLLPEMYCNDQNGENNDVWYLNNGAS 132
              +  P L++AV++      C D    +++++ER+ P +   ++     D+WYL+NGAS
Sbjct: 122 QTEDAGPALLLAVTEAVQNAPCQDALCGLVVHEERVWPRLMLAEKGAAAGDLWYLDNGAS 181

Query: 133 NHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQEVYYIPKSCR 192
           NHM+G R  F+ELDE+ T +V+F D S++QIMG+G+++F CKN DQ  L +VYYIP  C 
Sbjct: 182 NHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSILFSCKNGDQWLLDDVYYIPSLCC 241

Query: 193 NIISLRQMTENENKVQMTEDVMKMSDRS-GKLLMSVKRTQKYLYKITLKTLKQVCLLTSL 252
           N++SL Q+TE  ++V M  D +++ D++  +L+M V+RT   LY+I L+    VCLL SL
Sbjct: 242 NMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLYRIELQLASPVCLLASL 301

Query: 253 KDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQVRLPFHRQSTY 312
            DP WLWH RLGHVNF+ LKL+ +K++V GVP V  PN+LC+AC++ KQVR  F   + Y
Sbjct: 302 DDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQACLVAKQVRQSFPGMANY 361

Query: 313 RVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDAFEAFKKCKLL 372
           R E PLELLH D+CGPI+P T AGN+YF+LIVDD +RWMW++++++K  A  A +K K L
Sbjct: 362 RAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSRWMWVFVIKSKDQALAASEKFKPL 421

Query: 373 MENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
            EN     IKTL+TDRG EFLS  F + C   GI+ HL APYSP
Sbjct: 422 AENTAGRTIKTLRTDRGSEFLSGEFARVCDAAGIERHLTAPYSP 465

[Close]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL
Match: Q94I37 (Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0050N08.13 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 201/414 (48.55%), Postives = 277/414 (66.91%), Query Frame = 0


Query: 3   KGHRFGGTDQGRWRGRGRGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGHYASEC-HG 62
           +G   G  ++GR RGRGRG   Q S  G+S    G RDKSHIK F C + GHY+++C H 
Sbjct: 234 EGANHGQAERGRGRGRGRG-GTQRSGGGSS---GGGRDKSHIKCFNCEEFGHYSTQCPHP 293

Query: 63  KDHDDEAHLTCAVEEEPGLMMAVSQE-GTCLRCDQKDVILLNKERLLPEMYCNDQNGENN 122
           K    EAHL    +  P L++AV++      R D    +++++ER+ P +   ++     
Sbjct: 294 KKKKAEAHLVQTEDAGPALLLAVTEAVQNAPRQDAHCGLVVHEERVWPRLMLAEKGAAAG 353

Query: 123 DVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 182
           D+WYL+NGASNHM+G R  F+ELDE+ T +V+F D S++QIMG G+++F CKN DQ  L 
Sbjct: 354 DLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGDASSVQIMGMGSILFSCKNGDQWLLD 413

Query: 183 EVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRS-GKLLMSVKRTQKYLYKITLKT 242
           +VYYIP  C N++SL Q+TE  ++V M  D +K+ D++  +L+M V+RT   LY+I L+ 
Sbjct: 414 DVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRLVMKVRRTSNRLYRIELQL 473

Query: 243 LKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQV 302
             QVCLL SL +P WLWH R+GHVNF+ LKL+ +K++  GVP V  PN+LC+AC++ KQV
Sbjct: 474 ASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVPTVHHPNQLCQACLVAKQV 533

Query: 303 RLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDA 362
           R PF   + YR E PLELLH D+CGPI+P T AGN+YF+LIVDD + WMW+++++ K  A
Sbjct: 534 RQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIVDDFSNWMWVFVIKLKDQA 593

Query: 363 FEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
              F+K K L +N     IKTL+TDRGGEFLS  F + C    I+ HL APYSP
Sbjct: 594 LAVFEKFKPLAKNTVGRTIKTLRTDRGGEFLSGKFARVCDAASIERHLTAPYSP 643

[Close]

BLAST of CSPI05G12940 vs. NCBI nr
Match: XP_031741708.1 (uncharacterized protein LOC116403903 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 1.0e-133
Identity = 248/302 (82.12%), Postives = 260/302 (86.09%), Query Frame = 0


Query: 1   MNKGHRFGGTDQGRWRGRGRGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGHYASECH 60
           MNKG  FGGTD+GRWRGRGRGTE QNSA GTSNTRNGTRDKS IK FTCNKM HYASEC 
Sbjct: 1   MNKGCGFGGTDRGRWRGRGRGTEHQNSAGGTSNTRNGTRDKSQIKCFTCNKMRHYASECR 60

Query: 61  GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENN 120
           GK  DDEAHLTC  EEE   MM VSQEGT  RCDQ++ ILL KERLLPEMY ND+NGENN
Sbjct: 61  GKGRDDEAHLTCVTEEELASMMVVSQEGTHTRCDQENAILLRKERLLPEMYYNDKNGENN 120

Query: 121 DVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 180
            VWYL+NGASNHMTG RE F ELD+SFT RVKF DG  IQ M KG VMFECKN DQKALQ
Sbjct: 121 GVWYLDNGASNHMTGHREKFIELDKSFTGRVKFGDGLIIQFMEKGMVMFECKNGDQKALQ 180

Query: 181 EVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKITLKTL 240
           EVYYIPK C NIISL QMTEN NKVQMTEDVMK+SDRSGKLLMSVKRTQ  LYKITLKTL
Sbjct: 181 EVYYIPKLCSNIISLGQMTENGNKVQMTEDVMKVSDRSGKLLMSVKRTQNCLYKITLKTL 240

Query: 241 KQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQVR 300
           KQVCLLTSL+DPTWLWHVRLGHVNF+DLKL+ EKKLVVGVPLVTQPNKLC AC+ITKQ +
Sbjct: 241 KQVCLLTSLEDPTWLWHVRLGHVNFHDLKLMGEKKLVVGVPLVTQPNKLCVACMITKQAK 300

Query: 301 LP 303
           LP
Sbjct: 301 LP 302

[Close]

BLAST of CSPI05G12940 vs. NCBI nr
Match: XP_020271888.1 (uncharacterized protein LOC109847051 [Asparagus officinalis])

HSP 1 Score: 434.9 bits (1117), Expect = 7.9e-118
Identity = 218/421 (51.78%), Postives = 290/421 (68.88%), Query Frame = 0


Query: 4   GHRFGGTDQGRWRGRG---------RGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGH 63
           G   G   +G + GRG          G  RQ     TS    G RDKS+IK F C   GH
Sbjct: 451 GEHGGQAGRGGFGGRGGRPGGGFGHGGAARQEGESSTS----GGRDKSNIKCFNCGVYGH 510

Query: 64  YASECH--GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYC 123
           + SECH   ++H+ EAHLT A +EEP LMMA+ +E +         ILLN+E+++P++  
Sbjct: 511 FQSECHKQRRNHEQEAHLTRAYDEEPTLMMAMLEESS-------SAILLNEEKVVPDLLT 570

Query: 124 NDQNGENNDVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECK 183
             +    NDVWYL+NGASNHMTG R+ F+ELDE+    VKF DGS ++I GKG+++F+C 
Sbjct: 571 AGEAQVANDVWYLDNGASNHMTGHRDKFKELDENIKGTVKFGDGSAVEIKGKGSILFQCN 630

Query: 184 NSDQKALQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYL 243
           N DQ+ L EVYYIP    NIISL QMTE+ + V ++ + +++ DR+G LLM V R+   L
Sbjct: 631 NGDQRLLPEVYYIPSLKSNIISLGQMTEDGSNVVISGEFLRVFDRNGALLMRVTRSTNRL 690

Query: 244 YKITLKTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEA 303
           Y+I LKT K  CL+ ++ DP WLWH RLGHVNF+ LK++ +K++  G+P +  PN+LCE 
Sbjct: 691 YRIELKTCKPACLMANINDPAWLWHARLGHVNFFALKMMTDKRMASGLPKILHPNQLCEG 750

Query: 304 CVITKQVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYM 363
           C++ KQ RL F  Q+ +R +KPLELLHAD+CGPISP TLAGN+YFLL+VDD +RWMW+YM
Sbjct: 751 CLVAKQARLLFPSQANFRAQKPLELLHADLCGPISPSTLAGNRYFLLVVDDFSRWMWVYM 810

Query: 364 LEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYS 414
           L+AKS A E FKK K  +EN  ++K+KTL+TDRGGEFLS  FT+FC+  GI+ HL APY+
Sbjct: 811 LKAKSQACETFKKFKTEVENACDHKVKTLRTDRGGEFLSKEFTKFCEDYGIKRHLTAPYT 860

[Close]

BLAST of CSPI05G12940 vs. NCBI nr
Match: XP_031741713.1 (uncharacterized protein LOC116403908 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.1e-116
Identity = 216/258 (83.72%), Postives = 227/258 (87.98%), Query Frame = 0


Query: 1   MNKGHRFGGTDQGRWRGRGRGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGHYASECH 60
           MNKG RF G D+GRWRGRGRGTERQNSA GTSNT NGTRDKSHIK FTCNKMGHYA E  
Sbjct: 216 MNKGRRFSGIDRGRWRGRGRGTERQNSAGGTSNTGNGTRDKSHIKCFTCNKMGHYALEYR 275

Query: 61  GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENN 120
           GK HD+E+HLTC VEEEP LMMA+SQEGT  RCDQ+D ILLNKERLLPEMYCND+NGENN
Sbjct: 276 GKGHDEESHLTCVVEEEPTLMMAMSQEGTRTRCDQEDAILLNKERLLPEMYCNDKNGENN 335

Query: 121 DVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 180
           DVWYL+NGASNHM G RE FQELDESFT +VKF DG TIQIM KGTVMFECKN DQKALQ
Sbjct: 336 DVWYLDNGASNHMIGHREKFQELDESFTGKVKFGDGPTIQIMEKGTVMFECKNGDQKALQ 395

Query: 181 EVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYLYKITLKTL 240
           EVYYIPK C NIISL QMTEN NKVQM ED+MK+SDRSGKLLMSVK TQ  LYKITLKTL
Sbjct: 396 EVYYIPKLCSNIISLGQMTENGNKVQMIEDIMKVSDRSGKLLMSVKGTQNRLYKITLKTL 455

Query: 241 KQVCLLTSLKDPTWLWHV 259
           KQVCLLTSL+DPTWLWHV
Sbjct: 456 KQVCLLTSLEDPTWLWHV 473

[Close]

BLAST of CSPI05G12940 vs. NCBI nr
Match: XP_020258980.1 (uncharacterized protein LOC109835417 [Asparagus officinalis])

HSP 1 Score: 415.6 bits (1067), Expect = 5.0e-112
Identity = 212/421 (50.36%), Postives = 288/421 (68.41%), Query Frame = 0


Query: 4   GHRFGGTDQGRWRGRG---------RGTERQNSARGTSNTRNGTRDKSHIKFFTCNKMGH 63
           G   G   +G + GRG          G  RQ     TS    G RDKS+IK F C   GH
Sbjct: 312 GEHGGQAGRGGFGGRGGRPGGGFGHGGAARQEGESSTS----GGRDKSNIKCFNCGVYGH 371

Query: 64  YASECH--GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYC 123
           + SECH   ++++ EAHLT A +EEP LMMA+ +E +        V+LLN+E+++P++  
Sbjct: 372 FQSECHKQRRNNEQEAHLTRAYDEEPTLMMAMLEESS-------RVVLLNEEKVMPDLLT 431

Query: 124 NDQNGENNDVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECK 183
             +   +N+ WYL+NGASNHMTG R+ F+ELDE+    VKF DGS ++I GKG+++F+C 
Sbjct: 432 AGEAHVDNNTWYLDNGASNHMTGHRDKFKELDENIKGTVKFGDGSAVEIKGKGSILFQCN 491

Query: 184 NSDQKALQEVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSGKLLMSVKRTQKYL 243
           N DQ+ L EVYYIP    NIISL QMTE+ + V ++ + +++ DR+G LLM V R+   L
Sbjct: 492 NGDQRLLPEVYYIPSLKSNIISLGQMTEDGSNVVISGEFLRVFDRNGALLMRVTRSTNRL 551

Query: 244 YKITLKTLKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEA 303
           Y+I LKT K  CL+ ++ DP      RLGHVNF+ LK++ +K++  G+P +  PN+LCE 
Sbjct: 552 YRIELKTCKPACLMANINDP-----ARLGHVNFFALKMMTDKRMASGLPKILHPNQLCEG 611

Query: 304 CVITKQVRLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYM 363
           C++ KQ RLPF  Q+ +R +KPLELLHAD+CGPI+P TLAGN YFLLIVDD +RWMW+YM
Sbjct: 612 CLVAKQARLPFPSQANFRAQKPLELLHADLCGPITPSTLAGNNYFLLIVDDFSRWMWVYM 671

Query: 364 LEAKSDAFEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYS 414
           L+AKS A E FKK K ++EN  ++K+KTL+TDRGGEFLS  FT+FC+  GI+ HL APY+
Sbjct: 672 LKAKSQACETFKKFKTVVENACDHKVKTLRTDRGGEFLSKEFTKFCEDYGIKRHLTAPYT 716

[Close]

BLAST of CSPI05G12940 vs. NCBI nr
Match: EEC84282.1 (hypothetical protein OsI_30754 [Oryza sativa Indica Group])

HSP 1 Score: 412.1 bits (1058), Expect = 5.5e-111
Identity = 203/414 (49.03%), Postives = 284/414 (68.60%), Query Frame = 0


Query: 4   GHRFGGTDQGRWRGRGRGTERQNSAR--GTSNTRNGTRDKSHIKFFTCNKMGHYASEC-H 63
           G+R  G  +GR RGRG G  R ++ R  G   +  G RDKSHIK + C + GHY+++C H
Sbjct: 246 GNRAQG-GRGRGRGRGGGGGRSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPH 305

Query: 64  GKDHDDEAHLTCAVEEEPGLMMAVSQEGTCLRCDQKDVILLNKERLLPEMYCNDQNGENN 123
            K    EAHL    +  P L++AV+++      +    +++++ER+ P++   D      
Sbjct: 306 PKKKKVEAHLAQTDDANPALLLAVTED------EPASGLVVHEERVWPQLLLADSGAATG 365

Query: 124 DVWYLNNGASNHMTGPRETFQELDESFTRRVKFDDGSTIQIMGKGTVMFECKNSDQKALQ 183
           D+W+L+NGASNHMTG R  F++LD S T  VKF D ST++I GKG+++F CKN DQ  LQ
Sbjct: 366 DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQ 425

Query: 184 EVYYIPKSCRNIISLRQMTENENKVQMTEDVMKMSDRSG-KLLMSVKRTQKYLYKITLKT 243
           +V+YIP  C N++SL Q+TE  ++V M EDV+++ D+S  +L+M V+RT   LY+I LK 
Sbjct: 426 DVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKL 485

Query: 244 LKQVCLLTSLKDPTWLWHVRLGHVNFYDLKLIREKKLVVGVPLVTQPNKLCEACVITKQV 303
              VCLLT + +P WLWH RLGHVNF  +KL+ +K +  G+P +T PN+LC+AC++ KQ+
Sbjct: 486 ATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQI 545

Query: 304 RLPFHRQSTYRVEKPLELLHADICGPISPCTLAGNKYFLLIVDDSTRWMWMYMLEAKSDA 363
           R PF   + +R E+PLELLH D+CGPI+P T+AGN+YF+LIVDD +RWMWM++++ K  A
Sbjct: 546 RQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQA 605

Query: 364 FEAFKKCKLLMENKTEYKIKTLQTDRGGEFLSAGFTQFCKKEGIQGHLIAPYSP 414
            EAF K K L EN    +IKTL++DRGGEFLS  F Q C++ GIQ HL APYSP
Sbjct: 606 LEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSP 652

The following BLAST results are available for this feature:

BLAST of CSPI05G12940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.1e-33	25.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.0e-27	27.36	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.8e-22	28.71	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.4e-21	28.10	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of CSPI05G12940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B8BDZ6	2.7e-111	49.03	Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4...	[more]
Q0J8A6	1.0e-110	48.56	Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE...	[more]
A0A0P0XB91	1.0e-110	48.56	Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE...	[more]
Q7XMW2	1.8e-107	49.26	OSJNBb0040D15.12 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0040D...	[more]
Q94I37	4.0e-107	48.55	Putative retroelement OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0050N08....	[more]

BLAST of CSPI05G12940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741708.1	1.0e-133	82.12	uncharacterized protein LOC116403903 [Cucumis sativus]	[more]
XP_020271888.1	7.9e-118	51.78	uncharacterized protein LOC109847051 [Asparagus officinalis]	[more]
XP_031741713.1	1.1e-116	83.72	uncharacterized protein LOC116403908 [Cucumis sativus]	[more]
XP_020258980.1	5.0e-112	50.36	uncharacterized protein LOC109835417 [Asparagus officinalis]	[more]
EEC84282.1	5.5e-111	49.03	hypothetical protein OsI_30754 [Oryza sativa Indica Group]	[more]

BLAST of CSPI05G12940 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 305..413 e-value: 1.1E-21 score: 79.1
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 232..298 e-value: 1.7E-12 score: 47.0
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 312..413 e-value: 1.1E-9 score: 38.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 310..413 score: 17.041506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	PANTHER	PTHR34676:SF11	ZINC FINGER, CCHC-TYPE-RELATED	coord: 5..268
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 5..268
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 309..413
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 29..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G12940.1	CSPI05G12940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding