CSPI05G10920 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G10920
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	sister chromatid cohesion 1 protein 1
Location	Chr5: 9459633 .. 9463162 (-)
RNA-Seq Expression	CSPI05G10920
Synteny	CSPI05G10920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCGACAATGCACGCCAAGATTAATCGGAGGAAGCTCGATAACTTGAACATAATCAAAATTTGGTAATGGAAAAAACAGAAGATGATGGAGTTAAGTTTGTTTTTATTTTCGAGTGTTTCTTTAGTTTTGACTTTTCTGCTGGCTTTTGTAGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACTCTCGGGGATTCTTATGGGTAATCGTTCTTCCAGTTCTTTCTTATTTTTCCAGATTTTTAATGCTCTGTTTTTCATTTCAGTGACGGATTTGTGTTTGTCTGCTTCATTATTCTCAGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTCTTTACGGTAATCTTCTGGTTACTCTTTTTATGAAGGAATGTATTGATTTAATGTTTGAACGCTGTCTCTGAAGGATTGCGCATTTATTTTTTCTTCTTGCTCTTTTATCACAGAGGATGTAACTCGCCTTCTGGTAATTACTCAATTCTGAGTTCTATCGATAGAGTACCGTTTGGTTTTGTGTCTTCTTATTTCTATTGAATAAGTTGATTCGCTTTGTTTTCTGGAATTGATTTTCTCAGATTGAGATAAACGAAGCATGGAAAGTGAAAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAGTCCGTCTCTACCTACCTTCTCTCAACAGTAATGCATGATCATTTAATTATTGATTTACTTAGAAAATGAATGCGTCTGCATTTGAGAATATGAATAGTTTGAACAATGGTCCGGGTTGCTTCCCGGTCAAAAAATAAGATGGGTCCTTGCGGATTAAGAGAGTTATTTTGGATTGGAGTTTATTTAGTTAGGATTTTAGTATTTCCATAGTCTAAAGTAAGATGAGCTTGGGGTATTAAGAATATGGTTTTGGATCTGAATATTTCTCATTATGACTTTCATTTGTCCACATTCCAAAATAATTAAGATAACTTGTCTTTATTATTATTTTTTTTCCTTTCAATATGTTCTTCATATGTTCACTGTCCAAAATGTAATTTGAGATTGAGAAAGGTTGAGAGTGTGATTTCGGCTCAATTGTATGTTAACAAATGCTCACAGCTCAAAATAAGATGAGTATACGGTCGGTTAAGAAGGTTATCTTGATTCTGAATTTATTTTGTTACAATTTATATCTTTCCACATGTATTCAGGAAGGAGGCTATTACTAGGCCTGAGAAGGATCCGAACGACATTTCCTACGACACTTCTCCAATGAAGTTTCAACAAACCGCATTTTTTAGTATGGTAAGTTGTAGAAGAGAAGGGGTTACTTTTGTTTCATCAATTTATAGAAAGATATAAATTTCATGTGTCCAGAGCACTTTAATGTGGAATTGGGAGATTTTAAGCCTAATAAGTTGCGTTAAGATTGATTTACGAGAAAGACAAGCATAGAATAAACTTGTTGGATATTGGCTTTGAAGGCAAATGATTTATTTTGGCAATTATCGTCATACTATTTTGCATGTTCTTTGAAACAAACTATATGAGTTTGGCAATTTATTTCTGGCTAGTTTTTAGTTTTTCAATTACCAATTGTTCATTGATAGATTTTTCTGCGTTTGTAGCGGCTTGACAGTGTGGATGAACCCTATATCAACGATAAAACAGTGGAAGATGACCCATCACAAAACTTCCATCAAAGTTTTATTCCGTCCCCTTGAACTCATTTTCTGCATAACTATTAAATTCATGATGCGTTCTACTTCTACCTACTAATGATCTCGGTTAATCTTTGGCCAGCTGATGCTGAAAATATAACCTTAATTGAGCGTTTTGATATGTATCAATCAAAGACAAGTACATTTGATCGGTTTGAAAGGTGAATTCTTTACTTGTATGGACAGAACTTTGCAGTTATCGATATAATTTCTGTACTACCTTCCTCTTGCTCAAAAACTTGAGCCATAAAACTTATGTGTTAATTGAAGCTCGTAACATACACCATTCCAAATTCATGAAGCTCTCTCTTGCTCTATAGTGATAATTCAACTCGTTATTTGAAATGCTTGTGAGGTGAAATGGTAAGCAAAGAACCAACAACGTCAACTTCTTGTGCTGGATTTATAGATTTGATATTGAAGAGGACGGGGATACACAACCAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTCCCCCTCCTCCTCCAGACAAGTATCCAGAAGGTAATATACATTATCATGATTTGGCACTTAAAAGGCTCTCAACTGCACCATGTATGTATTCCACATTCATAACTATATGAACATTCATTTTTAAGTTAAATCTTCTAAATGTTAATGTCAAACTATGAATTTTTACTTCGGGAGGAATGAAATAAATGTGATGATATTAACGTTTCATGCATTTGTTTTTTCATCACAACATCCTAGAAATGTGAATATCTACAAACTCATACTTCAGGGATGAGAACTTATAAATAGCCTCCACTCTCCTTCTTTTCTTATCTCTCGGTATCTTCTTTTTCTTCTTATTTTTAGTATCTTTTCCAGATCAGATTCTACTATATTTACACTTGATGAAAAAATAGATCAGACTGGTCGATGGAAACTTAGTACTAAGTAGCCTCTTGCTAAAACAGACAACTCTATTAATCTTTTCAGAAAAGAAAATTGCTATGATTCATCCTACCACACTCCAAAACTCGATTTAACTTGCTACTACACTCCAAACGAACTTTCATCATCAAATGCCAATTTTAGAAGATATTTCACGTTGTTATGAATTCTCTTACGTTTAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTTGAACACATTGTTGATCAGCCGGCCGAGGAATCCAAGGAACTTAGACAGGTATTCTACTAGTTTGCTTGATAAAGAGTAATTAATTATACATTGTAGGATTAATCGGTCAATGGAGTATATCCATTCGACATTAGGTGGAGCAGGTGGCAAGAAAAAGGAAAGCAAAAAGAACAGCAGCCTCTTTGATGGACTATGAACAGACCATCATTCCTGGACACATATACCAATCTTGGCTAAAAGATGTCTCGGATCTGATCTCTAGAAGAAGAAGAAAGAGAAAGGTTCTTAGTCTTCAATCTGTAGATTTAGATAATGAGCACACTTTTTAACTATTATCTTGAAAATTTTACTTGAATAAGAGTGTTCTTGAAGATTGACTGCCACAATGTATCTTAGATACTTATTTTGAACGGACAGAGTGATGTCTGTGATAAGATTGATATTACACAAGATAACAAAAACTACCATTAAGTTAATAAAATAAAGAAGTTTCATGTTCTTTTGTAGCAACGGACAGGTCCAATGTTCACTAAGAAGATAGCCACTCTCATGGACCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGAGGGAAGTAGGGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGTATCCGCCAACCCCCTGACTCACCTTCTGGTTAG

mRNA sequence

ATGGCTGCGACAATGCACGCCAAGATTAATCGGAGGAAGCTCGATAACTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACTCTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGAAAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAGAAGGAGGCTATTACTAGGCCTGAGAAGGATCCGAACGACATTTCCTACGACACTTCTCCAATGAAGTTTCAACAAACCGCATTTTTTAGTATGCGGCTTGACAGTGTGGATGAACCCTATATCAACGATAAAACAGTGGAAGATGACCCATCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTAATTGAGCGTTTTGATATGTATCAATCAAAGACAAGTACATTTGATCGGTTTGAAAGATTTGATATTGAAGAGGACGGGGATACACAACCAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTCCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTTGAACACATTGTTGATCAGCCGGCCGAGGAATCCAAGGAACTTAGACAGCAACGGACAGGTCCAATGTTCACTAAGAAGATAGCCACTCTCATGGACCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGAGGGAAGTAGGGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGTATCCGCCAACCCCCTGACTCACCTTCTGGTTAG

Coding sequence (CDS)

ATGGCTGCGACAATGCACGCCAAGATTAATCGGAGGAAGCTCGATAACTTGAACATAATCAAAATTTGTGAGGAGATTTTGAATCCTTCGGTTCCGATGGCTCTAAGACTCTCGGGGATTCTTATGGGTGGCGTTGTCATTGTTTATGAACGGAAAGTTAAAATTCTTTACGAGGATGTAACTCGCCTTCTGATTGAGATAAACGAAGCATGGAAAGTGAAAGCAGCTCCAGAGCCCACCGCCCTTCCCAAAGGAAAATCTCTGGCCAAGAAGGAGGCTATTACTAGGCCTGAGAAGGATCCGAACGACATTTCCTACGACACTTCTCCAATGAAGTTTCAACAAACCGCATTTTTTAGTATGCGGCTTGACAGTGTGGATGAACCCTATATCAACGATAAAACAGTGGAAGATGACCCATCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTAATTGAGCGTTTTGATATGTATCAATCAAAGACAAGTACATTTGATCGGTTTGAAAGATTTGATATTGAAGAGGACGGGGATACACAACCAGATTTTGCATCTGTAGATCAAACACAAATTCCAGCTACTGTTAGACCTCCCCCTCCTCCTCCAGACAAGTATCCAGAAGGCCCTCCTGATGCTGAAGTCCAGGACCAACATCTTGAACACATTGTTGATCAGCCGGCCGAGGAATCCAAGGAACTTAGACAGCAACGGACAGGTCCAATGTTCACTAAGAAGATAGCCACTCTCATGGACCTTCCTCCTGTGGTGTTAAGTGAACGCTTATTCACAGAGGGAAGTAGGGAAGCCTACTATCCAGCTCCTCTCCTAGAGTTATGGATGAGAAGTATCCGCCAACCCCCTGACTCACCTTCTGGTTAG

Protein sequence

MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQQRTGPMFTKKIATLMDLPPVVLSERLFTEGSREAYYPAPLLELWMRSIRQPPDSPSG*

Homology

[Close]

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot
Match: Q9S7T7 (Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE=2 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 5.8e-57
Identity = 134/264 (50.76%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV
Sbjct: 29  MAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLFDDV 88

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPND---------ISYDTSPM 120
            R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +  D         +    + M
Sbjct: 89  NRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFEQTRNVPKFGNYM 148

Query: 121 KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRF 180
            FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRF
Sbjct: 149 DFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYHGSFQTNNETYDRF 208

Query: 181 ERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIV 240
           ERFDIE D +TQ +    +  +IP T+ P PP     PEG     P   E Q+   +   
Sbjct: 209 ERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQRQEQQENRRDGFA 268

Query: 241 DQPAEESKELRQQRTGPMFTKKIA 251
           +Q  E++   +++   P   KK A
Sbjct: 269 EQMEEQNIPDKEEHDRPQPAKKRA 288

[Close]

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           +AA +  K+ + ++ + +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D 
Sbjct: 19  IAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLLLGVVRIYSRKVNYLFDDC 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           +  L+++ +A++  A      LP  +S A   +IT PE                     +
Sbjct: 79  SEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPE---------------------T 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
             LD  + P   D  +      + H +  E ITL +  D     TS F   ERF    DG
Sbjct: 139 FDLDDFELP---DNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFG---DG 178

Query: 181 DTQPDFASVDQ 192
           DT      +D+
Sbjct: 199 DTSQAALDLDE 178

[Close]

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot
Match: Q6TEL1 (Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad21a PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D 
Sbjct: 19  LAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADC 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK 100
               I+I  A++    P    LP+    A   AIT PE+
Sbjct: 79  NEAFIKIKMAFR----PGVVDLPEDNREAAYNAITLPEE 113

[Close]

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot
Match: Q3SWX9 (Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.3e-05
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D 
Sbjct: 19  LAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADC 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK 100
               I+I  A++    P    LP+    A   AIT PE+
Sbjct: 79  NEAFIKIKMAFR----PGVVDLPEENREAAYNAITLPEE 113

[Close]

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot
Match: O60216 (Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD21 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.3e-05
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           +AA    K+ +  +   N+    E I++P V MALR SG L+ GVV +Y RK K L  D 
Sbjct: 19  LAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADC 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEK 100
               I+I  A++    P    LP+    A   AIT PE+
Sbjct: 79  NEAFIKIKMAFR----PGVVDLPEENREAAYNAITLPEE 113

[Close]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL
Match: A0A1S3BZ41 (sister chromatid cohesion 1 protein 1 OS=Cucumis melo OX=3656 GN=LOC103495180 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.8e-146
Identity = 282/343 (82.22%), Postives = 285/343 (83.09%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 -----------------------------------------------QRTGPMFTKKIAT 295
                                                          QRTGPMFTKKI T
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIVT 318

[Close]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL
Match: A0A5D3E364 (Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00900 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 4.1e-146
Identity = 281/342 (82.16%), Postives = 285/342 (83.33%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 ----------------------------------------------QRTGPMFTKKIATL 295
                                                         +RTGPMFTKKI TL
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKRTGPMFTKKIVTL 318

[Close]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL
Match: A0A5A7SX09 (Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00380 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141
Identity = 276/343 (80.47%), Postives = 280/343 (81.63%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY + 
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN- 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
              LIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  ---LIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 -----------------------------------------------QRTGPMFTKKIAT 295
                                                          QRTGPMFTKKI T
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIVT 318

[Close]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL
Match: A0A6J1JET8 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 246/352 (69.89%), Postives = 265/352 (75.28%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDI----------SYDTSP 120
           TRLL+EINEAWKVKAAPE T +PKGKS+AKKEA TRP+KDP D+          SYDTSP
Sbjct: 79  TRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPKDVGDHEAQSINFSYDTSP 138

Query: 121 MKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDR 180
           MKFQQTAFF+MRLDSVDEPYI++KTVEDD S NFHQTDAENITL+ERFDMYQS T+TF+R
Sbjct: 139 MKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNTFNR 198

Query: 181 FERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPA 240
           FERFDIE+D DTQ +FASVDQT+IP T   P PP DKY EG P+AEVQDQHLE  V Q A
Sbjct: 199 FERFDIEDDEDTQSNFASVDQTKIPDTF-GPSPPQDKYQEGSPEAEVQDQHLERDVIQQA 258

Query: 241 EESKELRQ------------------------------------------------QRTG 295
            ESKELRQ                                                +RTG
Sbjct: 259 YESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTG 318

[Close]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL
Match: A0A6J1GXZ1 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458512 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 5.0e-120
Identity = 244/352 (69.32%), Postives = 264/352 (75.00%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDI----------SYDTSP 120
           TRLL+EINEAWKVKAAPEPT +PKGKS+AKKEA+TRP+KDP D+          SY+TSP
Sbjct: 79  TRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPKDVGDHEAQSINFSYNTSP 138

Query: 121 MKFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDR 180
           MKFQQTAFF+MRLDSVDEPYI++KTVEDD S NFHQTDAENITL+ERFDMYQS T+ F+R
Sbjct: 139 MKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENITLLERFDMYQSNTNAFNR 198

Query: 181 FERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPA 240
           FERFDIE+D DTQP+FASVDQT+IP T     PP DKY EGPPDAEVQDQHLE  V Q A
Sbjct: 199 FERFDIEDDEDTQPNFASVDQTKIPDTF-GTSPPQDKYQEGPPDAEVQDQHLERDVIQQA 258

Query: 241 EESKELRQQ------------------------------------------------RTG 295
             SKE RQ+                                                RTG
Sbjct: 259 YVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLKDVSDLISRRGKKRKRTG 318

[Close]

BLAST of CSPI05G10920 vs. NCBI nr
Match: XP_031742082.1 (sister chromatid cohesion 1 protein 1 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153
Identity = 293/343 (85.42%), Postives = 294/343 (85.71%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISY+TSPMKFQQTAFFS
Sbjct: 79  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYNTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQVE 258

Query: 241 -----------------------------------------------QRTGPMFTKKIAT 295
                                                          QRTGPMFTKKIAT
Sbjct: 259 QVARKRKAKRTAASLMDYEQTIIPGHIYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIAT 318

[Close]

BLAST of CSPI05G10920 vs. NCBI nr
Match: XP_008454870.1 (PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 3.8e-146
Identity = 282/343 (82.22%), Postives = 285/343 (83.09%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 -----------------------------------------------QRTGPMFTKKIAT 295
                                                          QRTGPMFTKKI T
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIVT 318

[Close]

BLAST of CSPI05G10920 vs. NCBI nr
Match: TYK30322.1 (sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 527.3 bits (1357), Expect = 8.4e-146
Identity = 281/342 (82.16%), Postives = 285/342 (83.33%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 ----------------------------------------------QRTGPMFTKKIATL 295
                                                         +RTGPMFTKKI TL
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKRTGPMFTKKIVTL 318

[Close]

BLAST of CSPI05G10920 vs. NCBI nr
Match: KAA0035874.1 (sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 511.5 bits (1316), Expect = 4.8e-141
Identity = 276/343 (80.47%), Postives = 280/343 (81.63%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAATMHAKINRRKLD LNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILY + 
Sbjct: 19  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYGN- 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
              LIEINEAWKVKAAPEPTALPKGKSLAKKEA+TRPEKDPND+SYDTSPMKFQQTAFFS
Sbjct: 79  ---LIEINEAWKVKAAPEPTALPKGKSLAKKEAVTRPEKDPNDVSYDTSPMKFQQTAFFS 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
           MRLDSVDEPYINDKTVEDDPSQNFHQTD ENITLIERFDMYQSKTSTFDRFERFDIEE  
Sbjct: 139 MRLDSVDEPYINDKTVEDDPSQNFHQTDIENITLIERFDMYQSKTSTFDRFERFDIEEYE 198

Query: 181 DTQPDFASVDQTQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ-- 240
           DTQPDFASVDQTQIPATVRP PPPPDKYPEGPPDAEVQDQHLEH VDQPA+ESKE RQ  
Sbjct: 199 DTQPDFASVDQTQIPATVRPSPPPPDKYPEGPPDAEVQDQHLEHNVDQPAKESKEHRQLE 258

Query: 241 -----------------------------------------------QRTGPMFTKKIAT 295
                                                          QRTGPMFTKKI T
Sbjct: 259 QEARKRKAKRTAASLMDYEQTIIPGHVYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIVT 318

[Close]

BLAST of CSPI05G10920 vs. NCBI nr
Match: KGN50276.2 (hypothetical protein Csa_005815 [Cucumis sativus])

HSP 1 Score: 499.6 bits (1285), Expect = 1.9e-137
Identity = 270/332 (81.33%), Postives = 271/332 (81.63%), Query Frame = 0


Query: 24  EEILNPSVPMALRLSGILM------------GGVVIVYERKVKILYEDVTRLLIEINEAW 83
           EEILNPSVPMALRLSGILM            GGVVIVYERKVKILYEDVTRLLIEINEAW
Sbjct: 20  EEILNPSVPMALRLSGILMVTDLCLSASLFSGGVVIVYERKVKILYEDVTRLLIEINEAW 79

Query: 84  KVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFSMRLDSVDEPYI 143
           KVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISY+TSPMKFQQTAFFSMRLDSVDEPYI
Sbjct: 80  KVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYNTSPMKFQQTAFFSMRLDSVDEPYI 139

Query: 144 NDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ 203
           NDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ
Sbjct: 140 NDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDGDTQPDFASVDQ 199

Query: 204 TQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ------------- 263
           TQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQ             
Sbjct: 200 TQIPATVRPPPPPPDKYPEGPPDAEVQDQHLEHIVDQPAEESKELRQVEQVARKRKAKRT 259

Query: 264 ------------------------------------QRTGPMFTKKIATLMDLPPVVLSE 295
                                               QRTGPMFTKKIATLMDLPPVVLSE
Sbjct: 260 AASLMDYEQTIIPGHIYQSWLKDVSDLISRRRRKRKQRTGPMFTKKIATLMDLPPVVLSE 319

[Close]

BLAST of CSPI05G10920 vs. TAIR 10
Match: AT5G05490.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 222.6 bits (566), Expect = 4.1e-58
Identity = 134/264 (50.76%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV
Sbjct: 29  MAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLFDDV 88

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPND---------ISYDTSPM 120
            R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +  D         +    + M
Sbjct: 89  NRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFEQTRNVPKFGNYM 148

Query: 121 KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRF 180
            FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRF
Sbjct: 149 DFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYHGSFQTNNETYDRF 208

Query: 181 ERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIV 240
           ERFDIE D +TQ +    +  +IP T+ P PP     PEG     P   E Q+   +   
Sbjct: 209 ERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQRQEQQENRRDGFA 268

Query: 241 DQPAEESKELRQQRTGPMFTKKIA 251
           +Q  E++   +++   P   KK A
Sbjct: 269 EQMEEQNIPDKEEHDRPQPAKKRA 288

[Close]

BLAST of CSPI05G10920 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 222.6 bits (566), Expect = 4.1e-58
Identity = 134/264 (50.76%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           MAAT+HAKINR+KLD L+II+ICEEILNPSVPMALRLSGILMGGVVIVYERKVK+L++DV
Sbjct: 19  MAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIVYERKVKLLFDDV 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPND---------ISYDTSPM 120
            R L+EIN AW+ K+ P+PT LPKGK+ A+KEA+T PE +  D         +    + M
Sbjct: 79  NRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFEQTRNVPKFGNYM 138

Query: 121 KFQQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRF 180
            FQQT F SMRL   DE ++N+    +D  Q FHQ DAENITL E    +Q+   T+DRF
Sbjct: 139 DFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYHGSFQTNNETYDRF 198

Query: 181 ERFDIEEDGDTQPDFASVDQTQIPATVRPPPPPPDKYPEG-----PPDAEVQDQHLEHIV 240
           ERFDIE D +TQ +    +  +IP T+ P PP     PEG     P   E Q+   +   
Sbjct: 199 ERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQRQEQQENRRDGFA 258

Query: 241 DQPAEESKELRQQRTGPMFTKKIA 251
           +Q  E++   +++   P   KK A
Sbjct: 259 EQMEEQNIPDKEEHDRPQPAKKRA 278

[Close]

BLAST of CSPI05G10920 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = 0


Query: 1   MAATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 60
           +AA +  K+ + ++ + +I    + IL P  P+ALRLS  L+ GVV +Y RKV  L++D 
Sbjct: 19  IAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLLLGVVRIYSRKVNYLFDDC 78

Query: 61  TRLLIEINEAWKVKAAPEPTALPKGKSLAKKEAITRPEKDPNDISYDTSPMKFQQTAFFS 120
           +  L+++ +A++  A      LP  +S A   +IT PE                     +
Sbjct: 79  SEALLKVKQAFRSAAVD----LPPEESTAPYHSITLPE---------------------T 138

Query: 121 MRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRFERFDIEEDG 180
             LD  + P   D  +      + H +  E ITL +  D     TS F   ERF    DG
Sbjct: 139 FDLDDFELP---DNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFG---DG 178

Query: 181 DTQPDFASVDQ 192
           DT      +D+
Sbjct: 199 DTSQAALDLDE 178

[Close]

BLAST of CSPI05G10920 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.6e-06
Identity = 52/194 (26.80%), Postives = 84/194 (43.30%), Query Frame = 0


Query: 2   AATMHAKINRRKLDNLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVT 61
           AA +H ++ + +  ++NI    + I+ P VP+ALR S  L+ GVV +Y +KV  LY D  
Sbjct: 20  AAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLLVGVVRIYSKKVDYLYNDWN 79

Query: 62  RLLIEINEAWKVKA-APEPTALPKGKSLAKKEAITRPEK---DPNDISYDTSPMKF---- 121
            L       W  KA       LP+    A  E++T P+    D  D+  DT  M+F    
Sbjct: 80  LL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFDLEDDTLDMEFDNHT 139

Query: 122 --QQTAFFSMRLDSVDEPYINDKTVEDDPSQNFHQTDAENITLIERFDMYQSKTSTFDRF 181
             ++    + ++ +  +PY+     ED  S++               D+ QS        
Sbjct: 140 RSEEDITLTDQIPTGIDPYVAVTFDEDIISESI------------PMDVDQSTEPVSRHT 196

Query: 182 ERFDIEEDGDTQPD 186
              D+E   +T PD
Sbjct: 200 GEIDVETAHETGPD 196

The following BLAST results are available for this feature:

BLAST of CSPI05G10920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7T7	5.8e-57	50.76	Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE...	[more]
Q8W1Y0	1.9e-07	28.80	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
Q6TEL1	1.8e-05	36.36	Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad...	[more]
Q3SWX9	2.3e-05	36.36	Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 ...	[more]
O60216	2.3e-05	36.36	Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD2...	[more]

BLAST of CSPI05G10920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZ41	1.8e-146	82.22	sister chromatid cohesion 1 protein 1 OS=Cucumis melo OX=3656 GN=LOC103495180 PE...	[more]
A0A5D3E364	4.1e-146	82.16	Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7SX09	2.3e-141	80.47	Sister chromatid cohesion 1 protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1JET8	1.7e-120	69.89	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GXZ1	5.0e-120	69.32	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of CSPI05G10920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742082.1	1.9e-153	85.42	sister chromatid cohesion 1 protein 1 [Cucumis sativus]	[more]
XP_008454870.1	3.8e-146	82.22	PREDICTED: sister chromatid cohesion 1 protein 1 [Cucumis melo]	[more]
TYK30322.1	8.4e-146	82.16	sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]	[more]
KAA0035874.1	4.8e-141	80.47	sister chromatid cohesion 1 protein 1 [Cucumis melo var. makuwa]	[more]
KGN50276.2	1.9e-137	81.33	hypothetical protein Csa_005815 [Cucumis sativus]	[more]

BLAST of CSPI05G10920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05490.1	4.1e-58	50.76	Rad21/Rec8-like family protein	[more]
AT5G05490.2	4.1e-58	50.76	Rad21/Rec8-like family protein	[more]
AT5G16270.1	1.3e-08	28.80	sister chromatid cohesion 1 protein 4	[more]
AT3G59550.1	3.6e-06	26.80	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..84 e-value: 3.4E-25 score: 88.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..215
None	No IPR available	PANTHER	PTHR12585:SF64	SISTER CHROMATID COHESION 1 PROTEIN 1	coord: 238..291
None	No IPR available	PANTHER	PTHR12585:SF64	SISTER CHROMATID COHESION 1 PROTEIN 1	coord: 1..240
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..240
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 238..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G10920.1	CSPI05G10920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase
biological_process	GO:0055088	lipid homeostasis
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0010032	meiotic chromosome condensation
biological_process	GO:0051754	meiotic sister chromatid cohesion, centromeric
biological_process	GO:0051455	monopolar spindle attachment to meiosis I kinetochore
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0071949	FAD binding
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016401	palmitoyl-CoA oxidase activity
molecular_function	GO:0005515	protein binding