CSPI05G10530 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G10530
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 8925991 .. 8926194 (+)
RNA-Seq ExpressionCSPI05G10530
SyntenyCSPI05G10530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTTTGCGCCTGCATCAAGTTCGGAGTGTTGCGATGCTCTAAGGCAGCACCTTGGGGCCATAGATTTACACATAATCTAACCATTATGTTCTATAGTGTTGCACACAGTATCATGGGGCGCCACAAGACTACAAGACAAAAGCTAATAAGCACCGAACTGACAACACTACATTTTACCTTCAAATTGCTCAAAACCTAA

mRNA sequence

ATGAGTCTTTGCGCCTGCATCAAGTTCGGAGTGTTGCGATGCTCTAAGGCAGCACCTTGGGGCCATAGATTTACACATAATCTAACCATTATGTTCTATAGTGTTGCACACAGTATCATGGGGCGCCACAAGACTACAAGACAAAAGCTAATAAGCACCGAACTGACAACACTACATTTTACCTTCAAATTGCTCAAAACCTAA

Coding sequence (CDS)

ATGAGTCTTTGCGCCTGCATCAAGTTCGGAGTGTTGCGATGCTCTAAGGCAGCACCTTGGGGCCATAGATTTACACATAATCTAACCATTATGTTCTATAGTGTTGCACACAGTATCATGGGGCGCCACAAGACTACAAGACAAAAGCTAATAAGCACCGAACTGACAACACTACATTTTACCTTCAAATTGCTCAAAACCTAA

Protein sequence

MSLCACIKFGVLRCSKAAPWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHFTFKLLKT*
Homology
[Close]
BLAST of CSPI05G10530 vs. ExPASy TrEMBL
Match: A0A0A0KLW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G200560 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-28
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 1  MSLCACIKFGVLRCSKAAPWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF 60
          MSLCA IKFGVLRCSKA PWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF
Sbjct: 1  MSLCARIKFGVLRCSKATPWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF 60

Query: 61 TFKLLKT 68
          TFKLLKT
Sbjct: 61 TFKLLKT 67

[Close]
BLAST of CSPI05G10530 vs. NCBI nr
Match: KGN50645.1 (hypothetical protein Csa_021449 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 2.1e-28
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 1  MSLCACIKFGVLRCSKAAPWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF 60
          MSLCA IKFGVLRCSKA PWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF
Sbjct: 1  MSLCARIKFGVLRCSKATPWGHRFTHNLTIMFYSVAHSIMGRHKTTRQKLISTELTTLHF 60

Query: 61 TFKLLKT 68
          TFKLLKT
Sbjct: 61 TFKLLKT 67

The following BLAST results are available for this feature:
BLAST of CSPI05G10530 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G10530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLW31.0e-2897.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G200560 PE=4 SV=1[more]
BLAST of CSPI05G10530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50645.12.1e-2897.01hypothetical protein Csa_021449 [Cucumis sativus][more]
BLAST of CSPI05G10530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G10530.1CSPI05G10530.1mRNA