CSPI05G10510 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G10510
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S acidic ribosomal protein P0
Location	Chr5: 8909281 .. 8911813 (-)
RNA-Seq Expression	CSPI05G10510
Synteny	CSPI05G10510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAAGCAAACCAGCGGCCTTTTTCATCTTCTACCAGCCTTTTAAGCTCCCCAGGAGTTGTCCAAAACCCTAAAAAACTCTTCTTAGCATTACACAGAGGTTAAAGAGACGGCATAGCTTCGCTGTCCGCCTTGGCAGAGCATCCAGCTTCGTCTTGGCCCTCAGTTTTGCTTTTTTTCTTTCTTCTGTAACCCCCCTTTTTTTGTTGTATCTTAGAATTTTACCCATTTCCAATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTCTGCCAGCTTCTCGATGAGTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTTGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCCGTGGTGACTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTCTGTGAGGATCCACTCTGAGCAGACTGGCAACAAGGCTTATCTCAATCTTCTTCCCCTTCTTGTGGTAAGTGAAGTTTTGGGGTCTTACATTTTGTTTCGAATTTCATCTCTGTGTTATTATGCTTATTTTTAAAGTCCCTATCTGCTAATTTTCTTCACATATGGAGATTTTGACATTGTACGTGTGTTTGGCTGTTACAGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTTGTAGTTCACTTTATGCTGTTCTTTTTGTTGTTTACATTGGTCACTCTTTAAATTTTCCATATGGATGATACTTTAATTGCATAATATCATGAGGCCACTTTAAATATGAATTTTTTAGCATCATTATGTTTAGTGTTGAATTATTGCGACTATTGTCACGAATATTTCACACCTTCAAGCTTGAACGTTATTGCTGTTGAGTTCTGTTGAATGATTGATAACCATAATGTATATTGTTCGCATAGACGCTCACATTTTTTCACAATGTAGAACAATAGGTATGTTTACTGTACAAAGTCTATGAGTTCAATTAGCTAGTCGCTTACTTAACGTTTGTTAAGCATAATAAATATACAACTATATGATACAGATTAATAATTTTGAGCATGAATTTAAAACTGTTCTTTTACCAACATGCGTCACATTGGCTGTGTGTATGTGTATCGTCTATGTATCCATGGATCTTGGACTTGAGGCCATTATTAGTTATCAGTATTGCTTTAACATCTATGTAGATATTGGATTTAGGCATTTATGAATTGTGAACACGTTCTAGTATTGAAGTTTACTGGCATGCTTTTGTTTTGTCGTGGGTCTTTAGGTTGTTCATGTAGCTTTAATTATGGTTATTGTTTTGGAAAAAGCATTCACGTCACATGTGTTTTGGGCTGGTTTTAGGAGACAATTCATTTTCTTTTGTTCCTATGTTTTCTAAACATCGCAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCATCGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTTGTAAATTTGATTATAAAGTAGCAACCCTTTTCCATGAATGTGGTCTGAGTTTTTGAATTCTTCTCCTTGCAGGTTCTTAATATTCCAACCAAGATTAACAAGGGTACAGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCGTATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGATCAGTCTTTAGCCCTCAGGTGCTTGATCTGACCGAGGATGATCTCCTTGAGAAGTTTGCATTGGGTGTTTCCATGGTTACATCCCTTTCATTGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAACCTTCTTGCTGTTGCAGTTGCTACTGACTATTCCTTCCCCCAGGCTGAGAAGGTTAAAGAGTACCTTGCGGTATGTGCCCCTTTTGATTGAGTTCTCTTGGTTGGCTTATATTAATGCTTATATTATTGTTGTTACATGAATCTATTAAAAGTTTGCTTTGGCCATTGTGGCTGACAAAATTTCCATTGGCTTCCCTTGTTTTTATACAGGATCCTAGCAAGTTTGCTGTTGCTGTGGCCGTGTCTGCTGCCGATTCTGGGTCTGCCCCAGAAGCTGCTGCAGCTGTTGAGGAGAAGAAGGAAGAACCAGCTGAGGAGTCTGATGATGACATGGGTTTCAGCTTGTTTGATTAATCTGTATGTTAGAGATATAGTAGGACATTTTGTGTTTTGTATCTCTTAGACTCACAGTTTGGTTTTCTCAGAGTTATTTTATTCAGCTGAATGTTACAATGTTTTTGTTATGGATCGATTGCTTTATTTAATATTTGAAAGAATTTTGAGACTTTTGTTTACAATGTTCAAACAGTATTAGCCAATGCGACAAAACCATAGATAAATTTAATGCTTCGTTTTAAATTGTTGTTTGGCTAAGTAGTTATGTGAAAG

mRNA sequence

TATAAAGCAAACCAGCGGCCTTTTTCATCTTCTACCAGCCTTTTAAGCTCCCCAGGAGTTGTCCAAAACCCTAAAAAACTCTTCTTAGCATTACACAGAGGTTAAAGAGACGGCATAGCTTCGCTGTCCGCCTTGGCAGAGCATCCAGCTTCGTCTTGGCCCTCAGTTTTGCTTTTTTTCTTTCTTCTGTAACCCCCCTTTTTTTGTTGTATCTTAGAATTTTACCCATTTCCAATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTCTGCCAGCTTCTCGATGAGTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTTGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCCGTGGTGACTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTCTGTGAGGATCCACTCTGAGCAGACTGGCAACAAGGCTTATCTCAATCTTCTTCCCCTTCTTGTGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCATCGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATTCCAACCAAGATTAACAAGGGTACAGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCGTATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGATCAGTCTTTAGCCCTCAGGTGCTTGATCTGACCGAGGATGATCTCCTTGAGAAGTTTGCATTGGGTGTTTCCATGGTTACATCCCTTTCATTGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAACCTTCTTGCTGTTGCAGTTGCTACTGACTATTCCTTCCCCCAGGCTGAGAAGGTTAAAGAGTACCTTGCGGATCCTAGCAAGTTTGCTGTTGCTGTGGCCGTGTCTGCTGCCGATTCTGGGTCTGCCCCAGAAGCTGCTGCAGCTGTTGAGGAGAAGAAGGAAGAACCAGCTGAGGAGTCTGATGATGACATGGGTTTCAGCTTGTTTGATTAATCTGTATGTTAGAGATATAGTAGGACATTTTGTGTTTTGTATCTCTTAGACTCACAGTTTGGTTTTCTCAGAGTTATTTTATTCAGCTGAATGTTACAATGTTTTTGTTATGGATCGATTGCTTTATTTAATATTTGAAAGAATTTTGAGACTTTTGTTTACAATGTTCAAACAGTATTAGCCAATGCGACAAAACCATAGATAAATTTAATGCTTCGTTTTAAATTGTTGTTTGGCTAAGTAGTTATGTGAAAG

Coding sequence (CDS)

ATGGCTATCAAACCCACCAAGGCTGAAAAGAAGGTCGCTTACGACTCCAAGCTCTGCCAGCTTCTCGATGAGTATAGCCAGGTCTTGGTTGTGGCCGCTGACAATGTTGGATCCAACCAGCTCCAGAACATTAGGAAGGGTCTCCGTGGTGACTCCATTGTGCTCATGGGGAAAAACACCATGATGAAGCGCTCTGTGAGGATCCACTCTGAGCAGACTGGCAACAAGGCTTATCTCAATCTTCTTCCCCTTCTTGTGGGCAACGTTGGTTTGATCTTCACCAAGGGTGATTTGAAGGAAGTCAGTGAAGAGGTGGCCAAATACAAGGTTGGAGCCCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCATCGTCCCACCAGGCAACACTGGGCTTGATCCATCTCAGACCTCTTTCTTCCAGGTTCTTAATATTCCAACCAAGATTAACAAGGGTACAGTCGAAATTATCACTCCTGTGGAGCTCATTAAGAAGGGTGATAAGGTTGGATCTTCTGAGGCTGCTCTCCTTGCCAAGCTAGGAATCAGGCCATTCTCGTATGGTCTTGTTGTCCTCTCTGTTTATGACAATGGATCAGTCTTTAGCCCTCAGGTGCTTGATCTGACCGAGGATGATCTCCTTGAGAAGTTTGCATTGGGTGTTTCCATGGTTACATCCCTTTCATTGGCCATTTCATACCCAACTCTGGCTGCTGCACCACACATGCTCATCAATGCATACAAAAACCTTCTTGCTGTTGCAGTTGCTACTGACTATTCCTTCCCCCAGGCTGAGAAGGTTAAAGAGTACCTTGCGGATCCTAGCAAGTTTGCTGTTGCTGTGGCCGTGTCTGCTGCCGATTCTGGGTCTGCCCCAGAAGCTGCTGCAGCTGTTGAGGAGAAGAAGGAAGAACCAGCTGAGGAGTCTGATGATGACATGGGTTTCAGCTTGTTTGATTAA

Protein sequence

MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVEEKKEEPAEESDDDMGFSLFD*

Homology

[Close]

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 2.6e-151
Identity = 278/320 (86.88%), Postives = 299/320 (93.44%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA K TKAEKK+AYD+KLC L++EY Q+LVV +DNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVR+H+E+TGN AYLNL+PLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KGDKVGSSEAALLAK
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDL+ KFA GVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHM +NAYKN+LAVAV TDYSFP+A+KVKEYL DPSKFAVA   + A +  AP AAA  E
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 505.8 bits (1301), Expect = 3.7e-142
Identity = 260/320 (81.25%), Postives = 292/320 (91.25%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIK TKAEKKVAYD KLCQLLDEY++VL+  ADNVGSNQLQ IRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           +++R +++H++ TGNK +L L+PLLVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE+ALLAK
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLV+ +VYD+GSVFSP+VLDLTEDDL+EKFA GVSMV S+SLAISYPT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHM +N YKN+LAVAV T+YS+P A+K+KEYL DPSKFAVA  V AADSG+A  +AA  E
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPV-AADSGAAAPSAAKEE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEP EESD D+G SLFD
Sbjct: 301 EKKEEPEEESDGDLGMSLFD 319

[Close]

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 8.3e-142
Identity = 265/319 (83.07%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+K TKAEKK+ YDSKLCQLL+EYSQ+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+++TGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+P+VL+LTEDDL+EKFA GVSM+T+LSLAISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L DP+KFAVAVA   +        A AVE
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 EKKEEPAEESDDDMGFSLF 320
              EE AEESD DMGF LF
Sbjct: 301 ---EEAAEESDGDMGFDLF 316

[Close]

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 8.3e-142
Identity = 266/320 (83.12%), Postives = 291/320 (90.94%), Query Frame = 0


Query: 3   IKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+KLCQL+DEY+Q+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSP+VLDLTED L+EKFA G+SMVTSL+LA+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADS--GSAPEAAAAVE 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L DPSKF VA A  +AD+  GSA   AAA  
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EKKEEPAEESDDDMGFSLFD 321
           E+K+E ++E D + GF LFD
Sbjct: 302 EEKKEESDEEDYEGGFGLFD 321

[Close]

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 502.3 bits (1292), Expect = 4.1e-141
Identity = 268/319 (84.01%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 3   IKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+KLCQL+DEY+Q+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE TGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSP+VLDLTED L+EKFA G+SMVTSL+LA+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVA-VAVSAADSGSAPEAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 301

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 318

[Close]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL
Match: A0A5D3BEN1 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00300 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.6e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL
Match: A0A0A0KM27 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.6e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVS+ADSGSAPEAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSSADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL
Match: A0A1S3CIR4 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.6e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL
Match: A0A6J1J9L0 (60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.7e-164
Identity = 309/320 (96.56%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFALGVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL
Match: A0A6J1H1U9 (60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 8.0e-164
Identity = 308/320 (96.25%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. NCBI nr
Match: XP_008463223.1 (PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa] >TYJ97519.1 60S acidic ribosomal protein P0 [Cucumis melo var. makuwa])

HSP 1 Score: 598.6 bits (1542), Expect = 3.2e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFP+AEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPEAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. NCBI nr
Match: XP_004149240.1 (60S acidic ribosomal protein P0 [Cucumis sativus] >KGN50643.1 hypothetical protein Csa_021475 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 3.2e-167
Identity = 319/320 (99.69%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVS+ADSGSAPEAAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSSADSGSAPEAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. NCBI nr
Match: XP_038892643.1 (60S acidic ribosomal protein P0 [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 5.7e-164
Identity = 314/321 (97.82%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVS-AADSGSAPEAAAAV 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVS AADSG+AP AAAAV
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAAADSGAAPAAAAAV 300

Query: 301 EEKKEEPAEESDDDMGFSLFD 321
           EEKKEEPAEESDDDMGFSLFD
Sbjct: 301 EEKKEEPAEESDDDMGFSLFD 321

[Close]

BLAST of CSPI05G10510 vs. NCBI nr
Match: XP_022987157.1 (60S acidic ribosomal protein P0 [Cucurbita maxima])

HSP 1 Score: 587.0 bits (1512), Expect = 9.6e-164
Identity = 309/320 (96.56%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFALGVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFALGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. NCBI nr
Match: XP_022957404.1 (60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical protein SDJN03_06169, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031572.1 hypothetical protein SDJN02_05613 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 586.3 bits (1510), Expect = 1.6e-163
Identity = 308/320 (96.25%), Postives = 317/320 (99.06%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+KPTKAEKKVAYDSKLCQLLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKPTKAEKKVAYDSKLCQLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+E TGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHAENTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG+KVGSSEAALLAK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVVLSVYDNGSVFSP+VLDLTEDDLLEKFA+GVSMVTSLSLA+SYPTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLLEKFAMGVSMVTSLSLAVSYPTLAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHMLINAYKNLLAVAVATDYSFPQAEKVKEYL DPSKFAVAVAVSAADSG+AP AAAAVE
Sbjct: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLEDPSKFAVAVAVSAADSGAAPAAAAAVE 300

Query: 301 EKKEEPAEESDDDMGFSLFD 321
           EKKEEPAEESDDDMGFSLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320

[Close]

BLAST of CSPI05G10510 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 504.6 bits (1298), Expect = 5.9e-143
Identity = 265/319 (83.07%), Postives = 291/319 (91.22%), Query Frame = 0


Query: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60
           MA+K TKAEKK+ YDSKLCQLL+EYSQ+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
           MMKRSVRIH+++TGN+A+L+LLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAA 240
           LGIRPFSYGLVV SVYDNGSVF+P+VL+LTEDDL+EKFA GVSM+T+LSLAISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADSGSAPEAAAAVE 300
           PHM +NAYKN+LAVA+AT+YSFPQAE VKE+L DP+KFAVAVA   +        A AVE
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 EKKEEPAEESDDDMGFSLF 320
              EE AEESD DMGF LF
Sbjct: 301 ---EEAAEESDGDMGFDLF 316

[Close]

BLAST of CSPI05G10510 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 504.6 bits (1298), Expect = 5.9e-143
Identity = 266/320 (83.12%), Postives = 291/320 (90.94%), Query Frame = 0


Query: 3   IKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+KLCQL+DEY+Q+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE +GN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSP+VLDLTED L+EKFA G+SMVTSL+LA+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVAVAVSAADS--GSAPEAAAAVE 302
           M INAYKN LA+AVATDY+FPQAEKVKE+L DPSKF VA A  +AD+  GSA   AAA  
Sbjct: 242 MFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKV 301

Query: 303 EKKEEPAEESDDDMGFSLFD 321
           E+K+E ++E D + GF LFD
Sbjct: 302 EEKKEESDEEDYEGGFGLFD 321

[Close]

BLAST of CSPI05G10510 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 502.3 bits (1292), Expect = 2.9e-142
Identity = 268/319 (84.01%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 3   IKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+KLCQL+DEY+Q+LVVAADNVGS QLQNIRKGLRGDS+VLMGKNTMM
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61

Query: 63  KRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
           KRSVRIHSE TGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSP+VLDLTED L+EKFA G+SMVTSL+LA+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVA-VAVSAADSGSAPEAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 301

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 318

[Close]

BLAST of CSPI05G10510 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-119
Identity = 237/319 (74.29%), Postives = 257/319 (80.56%), Query Frame = 0


Query: 3   IKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMM 62
           +K TKAEKK+AYD+KLCQL+DEY+Q+LV                                
Sbjct: 2   VKATKAEKKIAYDTKLCQLIDEYTQILV-------------------------------- 61

Query: 63  KRSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
            RSVRIHSE TGN A LNLLPLL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 62  -RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121

Query: 123 DVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
           DV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 122 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 181

Query: 183 IRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPTLAAAPH 242
           IRPFSYGLVV SVYDNGSVFSP+VLDLTED L+EKFA G+SMVTSL+LA+SYPTLAAAPH
Sbjct: 182 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPH 241

Query: 243 MLINAYKNLLAVAVATDYSFPQAEKVKEYLADPSKFAVA-VAVSAADSGSAPEAAAAVEE 302
           M INAYKN LA+AVAT+Y+FPQAEKVKEYL DPSKFAVA VA  +AD+G    AAA VEE
Sbjct: 242 MFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEE 285

Query: 303 KKEEPAEESDDDMGFSLFD 321
           K+E   E+   D  F LFD
Sbjct: 302 KEESDEEDYGGD--FGLFD 285

[Close]

BLAST of CSPI05G10510 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 280 VAVAVSAADSGSAPEAAAAVEEKKEEPAEESDDDMGFSLFD 321
           VA A  AA  G+A  A AA E+KK+EPAEESD D+GF LFD
Sbjct: 73  VAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:

BLAST of CSPI05G10510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	2.6e-151	86.88	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P41095	3.7e-142	81.25	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
O04204	8.3e-142	83.07	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]
P57691	8.3e-142	83.13	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
Q42112	4.1e-141	84.01	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]

BLAST of CSPI05G10510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BEN1	1.6e-167	99.69	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KM27	1.6e-167	99.69	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_5G199310 PE=3 ...	[more]
A0A1S3CIR4	1.6e-167	99.69	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103501429 PE=3 SV=...	[more]
A0A6J1J9L0	4.7e-164	96.56	60S acidic ribosomal protein P0 OS=Cucurbita maxima OX=3661 GN=LOC111484789 PE=3...	[more]
A0A6J1H1U9	8.0e-164	96.25	60S acidic ribosomal protein P0 OS=Cucurbita moschata OX=3662 GN=LOC111458814 PE...	[more]

BLAST of CSPI05G10510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463223.1	3.2e-167	99.69	PREDICTED: 60S acidic ribosomal protein P0 [Cucumis melo] >KAA0037392.1 60S acid...	[more]
XP_004149240.1	3.2e-167	99.69	60S acidic ribosomal protein P0 [Cucumis sativus] >KGN50643.1 hypothetical prote...	[more]
XP_038892643.1	5.7e-164	97.82	60S acidic ribosomal protein P0 [Benincasa hispida]	[more]
XP_022987157.1	9.6e-164	96.56	60S acidic ribosomal protein P0 [Cucurbita maxima]	[more]
XP_022957404.1	1.6e-163	96.25	60S acidic ribosomal protein P0 [Cucurbita moschata] >KAG6600936.1 hypothetical ...	[more]

BLAST of CSPI05G10510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40010.1	5.9e-143	83.07	Ribosomal protein L10 family protein	[more]
AT3G11250.1	5.9e-143	83.13	Ribosomal protein L10 family protein	[more]
AT3G09200.1	2.9e-142	84.01	Ribosomal protein L10 family protein	[more]
AT3G09200.2	2.0e-119	74.29	Ribosomal protein L10 family protein	[more]
AT5G47700.1	1.3e-04	63.41	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.4E-33 score: 116.4
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 7.5E-21 score: 73.9
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 1..320 e-value: 1.3E-135 score: 449.3
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 8..108 e-value: 3.6E-19 score: 68.8
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 234..319 e-value: 1.1E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..320
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..320
None	No IPR available	PANTHER	PTHR45699:SF18	60S ACIDIC RIBOSOMAL PROTEIN P0-1	coord: 1..320
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 2.81115E-87 score: 257.502
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 1.1E-47 score: 163.2
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 8..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G10510.1	CSPI05G10510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome