CSPI05G10130 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G10130
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Tubby-like F-box protein
Location	Chr5: 8606178 .. 8608156 (+)
RNA-Seq Expression	CSPI05G10130
Synteny	CSPI05G10130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGGATTATACTCGAGGTTCGATCTCGGAGAAGTTGTACTCAGGGAAATGCTACAACTACATCGAAATGAAGCTTGCTATTATGGGCTCTTATATAACCTTTATGCTTCAAATGGAAAATGGGGTGAAGTTAAAAAGGTGAGAGATTTGATGGTTCAGAGATGTTTGAACAAAGTCCGAGGGTATAACCTTGTAGAAACTAATGCAGGTGTGCTGTTTCATTAGGTGAAGCCACTTGTGTGGCTCATATCTTCATGTTCTCGTTAAGATAGTAAAAAATTTTGAAGTTCTGAAATACTGATTTGTGGAATTTTCTTACCACCCTTGACCTCTCCTTTGATGGAGTTTTGACGAGCCTTATCCAATAGGGAAATGTGAGATGTTGTTGATCGTCTAACTTTACTTGGAGAACTTCGGTGTTTGGAACCGTTCTTAGTTCGGGCCAACACTATAAGAAATGGGCCATTTAATAGCGTTCGAAATTGGACTATTGAAAACGAAATAAAAAACAAAAAAGTGGGAAATATAAAATTATCCCGCCCAATATTTCTCACGCTTTGGAGAACGTTTAACGATTTCATCTCTTTTGCTCAAGAGACGGCCGTCGTTCCACGCTTTATCTCTATTGAACGTTTCACGCTTGCGATACCCACCCACGTCCCGTCTCACACGACTGCCCTCCATTCAACCGACGACGTTGCCGTCGTTGTCTCTGTCCAATCGCCAACGCTGAAGCTCTAGCATCGCCATCGTCTATAAGCCAACACACCGTCGTCTACAAGAGTTTCGCTTAGGGTTCTTCGTCTATCAGCTCCTCCTCTCTTTACTGCTATTAGATACTTGGAGCTAAGGATTCGAGGTTAGTCTTCTTCTTCATTTCTTCTACTTCATTTTCCAACTCCAGTTATTAATAGGCTTGTTAATTGGAATTTGTATCTTGTTCTGCTGCCATTCAATTTATTTATAGTTTTGGTACTTCAATGGTACAGCTCTGCTGATTGAAAATGGGAAGTTTCTTCTTTCAGCAAAGCCTACACGAAGAACTACTAGCACGGAGTATATTATCTCAATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATTGGAAAACTGAGGTGAGACTGCACTTGACGAACAGCTATGAAATTTATTGTTTGCATACTTTGCTGTCTGTGTTAATATAATTACAGCACTCCAGACTTTCACACTTCTTAGGTCACAAATTATGATTTCCATTATATGTAATATACATTAAGTCTGTGAGAATGACATTGTGATATCAAACTTAAGTCTATTCTTGAGGTAATGTTCTGGTTGTCCAGGTTCCCGGTTGGAATTGAGGTAACGTTCTATGTCAATTAGGGCTTGCTTAAGTTCTGTTATTTTAGTTATATTCAAATGAGGTAACGTTCTATGTCAATTAGGGCTTGCTTAAGTTCTGTCATTTTAGTTATATTCAAATGCCTATTTCAACTTTTAACAGGAAAAGAGGTTTCGATGACTGTTCTCATTACTGTTATCTTTTGGGTTTCGTTTAGGTTTGATTTTTTATTGCGTCCTTCTTTGAGTGTGATGGGCGTCTTCGGTTTCATTTTTTTTTTTTTGTTATTTCTCTTTACTCGGTTCTGCAAGCAATGTTACTTCAAAATTTGACGTTCATTTCTGGGTGGTTCTTTTGTTGGAAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCAGCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCCACAGGTTTAAATATAAGCCATCCAACCTTGAGGGTTGAGATCATTTCTATTCCAATCACCCCTTTAGCAGCTACCAGCTACATTAATCGATTGTATTGTGTTTGTTTTTTGCTGTAGGTTATATATTTCTGCATCCAGCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCTAG

mRNA sequence

ATGGATGTGGATTATACTCGAGGTTCGATCTCGGAGAAGTTGTACTCAGGGAAATGCTACAACTACATCGAAATGAAGCTTGCTATTATGGGCTCTTATATAACCTTTATGCTTCAAATGGAAAATGGGGTGAAGTTAAAAAGGGTTCTTCGTCTATCAGCTCCTCCTCTCTTTACTGCTATTAGATACTTGGAGCTAAGGATTCGAGCTCTGCTGATTGAAAATGGGAAGTTTCTTCTTTCAGCAAAGCCTACACGAAGAACTACTAGCACGGAGTATATTATCTCAATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATTGGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCAGCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCCACAGGTTATATATTTCTGCATCCAGCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCTAG

Coding sequence (CDS)

ATGGATGTGGATTATACTCGAGGTTCGATCTCGGAGAAGTTGTACTCAGGGAAATGCTACAACTACATCGAAATGAAGCTTGCTATTATGGGCTCTTATATAACCTTTATGCTTCAAATGGAAAATGGGGTGAAGTTAAAAAGGGTTCTTCGTCTATCAGCTCCTCCTCTCTTTACTGCTATTAGATACTTGGAGCTAAGGATTCGAGCTCTGCTGATTGAAAATGGGAAGTTTCTTCTTTCAGCAAAGCCTACACGAAGAACTACTAGCACGGAGTATATTATCTCAATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATTGGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCAGCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCCACAGGTTATATATTTCTGCATCCAGCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCTAG

Protein sequence

MDVDYTRGSISEKLYSGKCYNYIEMKLAIMGSYITFMLQMENGVKLKRVLRLSAPPLFTAIRYLELRIRALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV*

Homology

[Close]

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot
Match: Q9FRH7 (Tubby-like F-box protein 10 OS=Arabidopsis thaliana OX=3702 GN=TULP10 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTT TEYIISM A+NI RSS+SY+GKLR
Sbjct: 152 ALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLR 196

[Close]

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot
Match: Q9FWT2 (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=UBC16 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.5e-12
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Sbjct: 45  RWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIF 82

[Close]

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot
Match: O23239 (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana OX=3702 GN=UBC17 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Sbjct: 45  RWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82

[Close]

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot
Match: P42743 (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Sbjct: 45  KWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVF 82

[Close]

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot
Match: Q9FMM0 (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=UBC18 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Sbjct: 45  KWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIF 82

[Close]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL
Match: A0A0A0KLZ5 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190470 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.5e-55
Identity = 118/124 (95.16%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 46  LKRVLRLSAPPLFTAIRYLELRIRALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRS 105
           L  VLRLSAPPLFTAIR LELRIRALLIENGKFLLS KPTRRTTSTEYIISMGAENILRS
Sbjct: 171 LSLVLRLSAPPLFTAIRNLELRIRALLIENGKFLLSPKPTRRTTSTEYIISMGAENILRS 230

Query: 106 SSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAM 165
           SSSYIGKLRWVIEVNGA GTL ANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAM
Sbjct: 231 SSSYIGKLRWVIEVNGAPGTLYANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAM 290

Query: 166 VTFV 170
           VTFV
Sbjct: 291 VTFV 294

[Close]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL
Match: A0A6J1J9K7 (Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482977 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-11
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Sbjct: 147 ALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLR 191

[Close]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL
Match: A0A6J1E5G8 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111430760 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-11
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Sbjct: 147 ALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLR 191

[Close]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL
Match: A0A5A7TCI5 (Tubby-like F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00300 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-11
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Sbjct: 147 ALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLR 191

[Close]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL
Match: A0A0A0L6H9 (Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G209470 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-11
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Sbjct: 147 ALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLR 191

[Close]

BLAST of CSPI05G10130 vs. NCBI nr
Match: XP_031741252.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCAN 129
           ALLIENGKFLLS KPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCAN
Sbjct: 241 ALLIENGKFLLSPKPTRRTTSTEYIISMGAENILRSSSSYIGKLRWVIEVNGALGTLCAN 300

Query: 130 ETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV 170
           ETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV
Sbjct: 301 ETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV 340

[Close]

BLAST of CSPI05G10130 vs. NCBI nr
Match: KAE8648008.1 (hypothetical protein Csa_021407 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 97  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQL 156
           MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQL
Sbjct: 1   MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQL 60

Query: 157 LCIIISIAMVTFV 170
           LCIIISIAMVTFV
Sbjct: 61  LCIIISIAMVTFV 73

[Close]

BLAST of CSPI05G10130 vs. NCBI nr
Match: CAA3000907.1 (tubby-like F-box 8 [Olea europaea subsp. europaea])

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-11
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 69  RALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           RALL+ENGKFLLSAK TRRTT TEY+ISMGA+NI RSSS+YIGKLR
Sbjct: 129 RALLVENGKFLLSAKRTRRTTCTEYVISMGADNISRSSSTYIGKLR 174

[Close]

BLAST of CSPI05G10130 vs. NCBI nr
Match: XP_022922930.1 (tubby-like F-box protein 8 [Cucurbita moschata] >XP_022922931.1 tubby-like F-box protein 8 [Cucurbita moschata])

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-11
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTTSTEYIISM AENI RSSSSYIGKLR
Sbjct: 147 ALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLR 191

[Close]

BLAST of CSPI05G10130 vs. NCBI nr
Match: KAG0496935.1 (hypothetical protein HPP92_001626 [Vanilla planifolia])

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-11
Identity = 42/56 (75.00%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIQLLCIIISIAMVTFV 170
           RW+IEV GA GTL ANETYQLQVDFPEHYPME PQVI F    LCI+I IAMV  V
Sbjct: 46  RWIIEVVGATGTLYANETYQLQVDFPEHYPMEAPQVI-FVPPALCILIFIAMVISV 100

[Close]

BLAST of CSPI05G10130 vs. TAIR 10
Match: AT1G25280.1 (tubby like protein 10 )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 70  ALLIENGKFLLSAKPTRRTTSTEYIISMGAENILRSSSSYIGKLR 115
           ALL+ENGKFLLSAK TRRTT TEYIISM A+NI RSS+SY+GKLR
Sbjct: 152 ALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLR 196

[Close]

BLAST of CSPI05G10130 vs. TAIR 10
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16 )

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-13
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Sbjct: 45  RWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIF 82

[Close]

BLAST of CSPI05G10130 vs. TAIR 10
Match: AT4G36410.1 (ubiquitin-conjugating enzyme 17 )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Sbjct: 45  RWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82

[Close]

BLAST of CSPI05G10130 vs. TAIR 10
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Sbjct: 45  KWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVF 82

[Close]

BLAST of CSPI05G10130 vs. TAIR 10
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18 )

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 114 RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY 152
           +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Sbjct: 45  KWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIF 82

The following BLAST results are available for this feature:

BLAST of CSPI05G10130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRH7	1.9e-12	82.22	Tubby-like F-box protein 10 OS=Arabidopsis thaliana OX=3702 GN=TULP10 PE=1 SV=1	[more]
Q9FWT2	9.5e-12	81.58	Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
O23239	1.6e-11	78.95	Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
P42743	1.0e-10	73.68	Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV...	[more]
Q9FMM0	1.0e-10	76.32	Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]

BLAST of CSPI05G10130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLZ5	5.5e-55	95.16	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190470 PE...	[more]
A0A6J1J9K7	2.2e-11	91.11	Tubby-like F-box protein OS=Cucurbita maxima OX=3661 GN=LOC111482977 PE=3 SV=1	[more]
A0A6J1E5G8	2.2e-11	91.11	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111430760 PE=3 SV=1	[more]
A0A5A7TCI5	2.2e-11	91.11	Tubby-like F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0L6H9	2.2e-11	91.11	Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G209470 PE=3 SV=1	[more]

BLAST of CSPI05G10130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741252.1	2.5e-46	99.00	pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like [Cucum...	[more]
KAE8648008.1	6.1e-32	100.00	hypothetical protein Csa_021407 [Cucumis sativus]	[more]
CAA3000907.1	4.5e-11	84.78	tubby-like F-box 8 [Olea europaea subsp. europaea]	[more]
XP_022922930.1	4.5e-11	91.11	tubby-like F-box protein 8 [Cucurbita moschata] >XP_022922931.1 tubby-like F-box...	[more]
KAG0496935.1	4.5e-11	75.00	hypothetical protein HPP92_001626 [Vanilla planifolia]	[more]

BLAST of CSPI05G10130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25280.1	1.4e-13	82.22	tubby like protein 10	[more]
AT1G75440.1	6.7e-13	81.58	ubiquitin-conjugating enzyme 16	[more]
AT4G36410.1	1.1e-12	78.95	ubiquitin-conjugating enzyme 17	[more]
AT1G45050.1	7.4e-12	73.68	Ubiquitin-conjugating enzyme family protein	[more]
AT5G42990.1	7.4e-12	76.32	ubiquitin-conjugating enzyme 18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 112..151 e-value: 7.0E-7 score: 29.0
IPR025659	Tubby-like, C-terminal	GENE3D	3.20.90.10	Tubby Protein; Chain A	coord: 17..131 e-value: 2.3E-8 score: 35.8
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 74..115
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 70..114 e-value: 2.7E-10 score: 40.4
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 114..154
None	No IPR available	PANTHER	PTHR24068:SF302	UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED	coord: 114..154
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 115..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G10130.1	CSPI05G10130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009620	response to fungus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009536	plastid