CSPI05G09470 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G09470
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RNA-binding protein CP31B, chloroplastic
Location	Chr5: 7947529 .. 7950393 (+)
RNA-Seq Expression	CSPI05G09470
Synteny	CSPI05G09470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCCAATAGGTTTTAGTAGGAAACTTAGGAACCCTCCAAGTTCGAATTTCAGGCGTTTATGAATCCACCATTGTGAAGATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGGTAGTTCATTTAATCTATTGCCTCAGCTGTTATATATCTCAGTAGCTTCACATTTCCTTTTGAACTCTTAGATTGAATGACATTGATGAGTTATGATTAATTGCTTATGAAAATTTCTCTGAGGGACTATGCTTCTGATTGTTTTAGTCTGCTAGTGTTAGACATTGATCTGGAAATGATTTGCCTTTGATGATTTACTGTCAATGCTTGAGGAAGGAGAAATTGCATTTCGAATATGAATTGCTGCTTTCTTAGGGGAATGGCTTGAGTTTGATTAAGCGTTAAAACTCTTTCTCGTGTTAGTTCCCTTGTAGATATTGTATGCACAATAGTGTCTATGGATCTGATACTCTAATAGTGTTTATTATATTGATCTGAGGAATTTTTAATGGTATTGCCCTAGTCCAAGCTGTGTCATCTAGATTGGTAGATGCTTTAGCGCTGCCCTTCTCCTTTTGATTGATTAGAATGTGAAAGTGGACTTTTCTTTTTGCTGATATTTATTAGTGCTCTTCAATATTCTACAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGGTATGATAATCTGATTAATGTGTAATTTCATTCCTCTTAGTAGGGAAGATCAAACAACTTTTGAATGGTTCATGATTGGGTGATTTGTGCCAGATCTTAGTCTTACTGAATGTGAGTTGGTGCAACTGTTGGCACTCAAATTGCTTGCAAGTGTGCAACTTCCGTTTTAAAGTTAATTGAGGTTAGAAATGAGATTTAAAAGGCATTATGACACTAGGATTTCCAAAGTTTAGCCAAATATTGTGTCATATATATAACATTACTAAAGAATATTCACTTGAACATACAATTAGCTTTCTTATTCTAAAAAACATATAGTATGTCATTTGAATTGATTTCTGTGTAATTAGCATGTCAGAGTCAGACTGTCAAGTTCTAATTGAGAGCTTGGGACTTGTACTTCGCTTTGTCCTGAACTGATAGTGGCCAGATCTCCTCCCCCTTTTTGCCTAGTGTACATCTACTGGCTAATATCTACGATTGAATTAACTGAGCAATTATAAGGACGGAGACCGGCTCTTAAGTCAGCTGTCTTAGTAACCCATCGGCAATCTCTTTTGTAACCTCCTATAGTTGTTATAGGCTTTCTGGGGTTTTCCTTGACTTTGTTTATCAGTGAAATGTTTATTTATCATAAAATCAATTTTGAATTTCCGGAGGCCAGATTCCTTTGGTTTTATTGCTACCTTACCACTGTTTCCCTTTCACAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGTGAGAATATGAACAATTTGATCTCTTGTCGTCATTATACTTTCTTACTTAATTCCACCACCTTATTACAAATTATTCTTATATAGGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGAGGTACAATGAATGCCTTCTCTTTGTTTCTTGTTGGCAGCAAAATTGAACTGTTGAGAATTTTCTTTTGCACTGTATGCTAATTGTAATCTGATGTTTTGAATTTCACTTATAGAAAGGTTAATATAAATTTAATCTGGCTAGGAGAAAAATTATTTTT

mRNA sequence

CTGCCAATAGGTTTTAGTAGGAAACTTAGGAACCCTCCAAGTTCGAATTTCAGGCGTTTATGAATCCACCATTGTGAAGATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGAGGTACAATGAATGCCTTCTCTTTGTTTCTTGTTGGCAGCAAAATTGAACTGTTGAGAATTTTCTTTTGCACTGTATGCTAATTGTAATCTGATGTTTTGAATTTCACTTATAGAAAGGTTAATATAAATTTAATCTGGCTAGGAGAAAAATTATTTTT

Coding sequence (CDS)

ATGGTTTTATCAAACAAAAAGTTGAAGCAGAAATTGAGAGAGAAGCTAGCCGAGTCGTTGATTTCATCAGTCGCCGGAAGGGATACCAACTTTGGTGTTTCCGGTGAACGGGATACAGAATCTCCGCGAAAATCCCTCAAAGAGCTATTAGGCACCGCTAGTGGCAATGGGCCCAGATTGTCCAAGCGAGAGAAACGAAGAGAATCGCTCGTTTTGACGGGTTCGGATGGAAATAAGAAGGAGAAGAAGGAAGATGAGAATCAGGGATTGGGAGAGAAGAAGAGGAAAAGAAACGAAGGGGTGAAGGAGAAGAATGCGGTTGGTGGGTTGGAAGAGGATAATGAGAAGGCCAAAAAGTTGAAGAATAAAAAGAAGCAGCAGCAGAAGAAGAAGATGAAGAAGAAGAAGAGTAATAAGAAGGAAAACAATGGCGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGCAGGGAGATGTAAGTGGGAATGACGTGAAAGGGCAGGTTGAAGAAACTCATTATAATATAGGCAGTGAATTTGATGAAAATTTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACCGAGGACGATATTTGTAGCTTTTTTGAAAGCTGTGGCACTATTACTGAAATTGATTGTATGAAGTTTCCAGAGAGTGGCAAGTTCAGAGGCATTGCTATATTGAGTTTCAAGACAGAAGCTGCAGCGAAACGAGCACTAGCCTGTGATGGAGCCGACATGGGGGGACTCTTCCTTAAAGTACAGCCCTACAAAGGAACTCGAAAGAATAGAGCAGCTGATTTCTCTCCAGGACTTGTGGAAGGCTACAACAGAATCTATATAGGGAATCTTTCGTGGGATGTAACTGAGGATGATCTAAAGAAACTATTTGTAAACTGTAAGATTGCTTCGATACGTTTTGGCATGGACAAGGAAACAGGGGAGTTTCGTGGCTACGCCCACGTGGATTTCTCTGACGGTATCTCATTAAAAACGGCTTTGAAGTTAGACCAGAAAATAATTCACGGTAGACCTGTCAAGATTAGATGCGCAGTTCCAAAGAAAGGGACAGAAAACGGCGGAGGAGGAGCAGTAGCAGGAGCAGAAACGCATCCAGAAATGAATCCAGAGCCTATACCGGAAACGAAGGAAGCTGCTGTAAGTGTAGTAAGCGCTGTTAGTGGTAAGATAAGAAGAAGAACATGCTACGAATGTGGTGAAAAAGGCCATCTTTCTTCCAACTGCCCAAATAAGCAGCTTGCGGATTCAGTTACAAGTTGA

Protein sequence

MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRLSKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS*

Homology

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BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot
Match: Q9M3B8 (Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 5.5e-72
Identity = 200/454 (44.05%), Postives = 260/454 (57.27%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQ++R+ LAESL  SV+            +T    +SLK LL ++S + PRL
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVS------------ETNPQSQSLKLLLDSSS-HKPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE-------KKRKRNEGVKEKNAVGGLEED 120
           SKREKRR        D   +E  E  N G  E       KKRKR++ V+    V  LE D
Sbjct: 61  SKREKRRNCETFAREDDEIRE-NEVGNGGSSEKTDTKIKKKRKRDDAVE----VDELEGD 120

Query: 121 NEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQV 180
            E  K+ +  +K++ KKK KK+K NK     EE   +EK K +E E   D          
Sbjct: 121 -EGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVKVEEIEVNTD---------- 180

Query: 181 EETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
                    E D  +  K+YVGGIPY STED+I S+F SCG I ++DC   PE G F GI
Sbjct: 181 -------NKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGT------RKNRAADFSPGLVEGYNRI 300
           A ++F TE  AKRALA D A MG  +L +Q Y  T      R+  ++ F+P +V+GYNR+
Sbjct: 241 AFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRV 300

Query: 301 YIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQK 360
           YIGNL+WD TE D++KLF +C I S+R G +KETGEF+GYAHVDF D +S+  ALKLDQ+
Sbjct: 301 YIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQ 360

Query: 361 IIHGRPVKIRCAVPKKGT------ENGGGGAVAGAETHPEMNPEPI----PETKEAAVSV 420
           +I GRPVKI CA+  +        E    G+    +T+   +P P      E  +     
Sbjct: 361 VICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEVDDGNYFA 418

Query: 421 VSAVSGKIRRRTCYECGEKGHLSSNCPNK-QLAD 431
            +  S K++RR CYECGEKGHLS+ CP K Q AD
Sbjct: 421 TTVSSSKVKRRVCYECGEKGHLSTACPIKLQKAD 418

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BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot
Match: P07909 (Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN=Hrb98DE PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15
Identity = 52/191 (27.23%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFK-----TEAAAK 250
           K+++GG+ Y +T++++ + FE  G I ++  MK P + + RG   +++       EA   
Sbjct: 32  KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91

Query: 251 RALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF 310
           R    DG         V+P +   +      SP       ++++G L  D  E  ++  F
Sbjct: 92  RPHKIDGR-------VVEPKRAVPRQDID--SPNAGATVKKLFVGALKDDHDEQSIRDYF 151

Query: 311 VNC-KIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKG 370
            +   I  I   +DKETG+ RG+A V+F D   +   +   Q  ++G+ V ++ A+PK+ 
Sbjct: 152 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQN 211

Query: 371 TENGGGGAVAG 376
            + GGGG   G
Sbjct: 212 DQQGGGGGRGG 213

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BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 0


Query: 191 KVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALAC 250
           K+++GG+ + +TE+ + +++E  GT+T+   M+ P S + RG   ++F        A+A 
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 251 DGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-K 310
               + G    V+P +   +  +A   PG      ++++G +  D  E  L++ F    K
Sbjct: 70  RPHTIDGRV--VEPKRAVAREESA--KPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGK 129

Query: 311 IASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPK------K 370
           I SI    DK++G+ RG+A V F D   +   +      I+G   ++R A+ K      +
Sbjct: 130 IDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQ 189

Query: 371 GTENGGGG 372
            T N  GG
Sbjct: 190 NTRNNRGG 193

[Close]

BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot
Match: Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.4e-13
Identity = 69/234 (29.49%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 141 ENNGEEEKEKEKEKEKEKEKQGDVS-GNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIP 200
           EN+ E +   E ++ +    +GDVS G++ +G V E   +  +EF E +   K++VG + 
Sbjct: 99  ENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLA 158

Query: 201 YYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRAL-ACDGADMGG 260
           Y      +   FE  GT+   + +   E+ + RG   ++  +   A+ A+   +  D+ G
Sbjct: 159 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 218

Query: 261 LFLKVQPY--KGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIR 320
             L V     +G+R  RA    P + E   R+Y+GNL WDV    L++LF  + K+   R
Sbjct: 219 RLLTVNKAAPRGSRPERA----PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEAR 278

Query: 321 FGMDKETGEFRGYAHVDFSDGISLKTALK-LDQKIIHGRPVKIRCA---VPKKG 365
              D+ETG  RG+  V  SD   L  A+  LD + + GR +++  A    P++G
Sbjct: 279 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot
Match: P48810 (Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster OX=7227 GN=Hrb87F PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 53/218 (24.31%), Postives = 100/218 (45.87%), Query Frame = 0


Query: 160 KQGDVSGNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTEDDICSFFESCGTITE 219
           +Q D +GN          Y+ G E  E     K+++GG+ Y +T+D + + FE  G I +
Sbjct: 3   EQNDSNGN----------YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVD 62

Query: 220 IDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSP 279
           +  MK P++ + RG   +++        A       + G    V+P +   +      SP
Sbjct: 63  VVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDG--RTVEPKRAVPRQEID--SP 122

Query: 280 GLVEGYNRIYIGNLSWDVTEDDLKKLFVNC-KIASIRFGMDKETGEFRGYAHVDFSDGIS 339
                  ++++G L  D  E+ L++ F +  +I S+    DK+TG+ RG+A ++F D   
Sbjct: 123 NAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDP 182

Query: 340 LKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAVAG 376
           +   +      I  + + ++ A+ K+  +  GGG   G
Sbjct: 183 VDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRG 206

[Close]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL
Match: A0A0A0KLT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180870 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.6e-226
Identity = 433/482 (89.83%), Postives = 433/482 (89.83%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAV GLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEE---------------------------------- 180
           KNKKKQQQKKKMKKKKSNKKENNGEE                                  
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEK 180

Query: 181 --------------EKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240
                         EKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV
Sbjct: 181 EKEKEKEKEKEKEKEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENLATKV 240

Query: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300
           YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG
Sbjct: 241 YVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDG 300

Query: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360
           ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS
Sbjct: 301 ADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIAS 360

Query: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420
           IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA
Sbjct: 361 IRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 420

Query: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 435
           VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV
Sbjct: 421 VAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSV 480

[Close]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL
Match: A0A1S3CF29 (RNA-binding protein CP31B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500194 PE=4 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 1.5e-205
Identity = 396/442 (89.59%), Postives = 407/442 (92.08%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLG----EKKRKRNEGVKEKNAVGGLEEDNEK 120
           SKREKRRESL+LTGSDGNK EKKE+ENQGLG    EKKRKRNEGVKEKNAV GLE+D EK
Sbjct: 61  SKREKRRESLILTGSDGNKNEKKEEENQGLGEMKREKKRKRNEGVKEKNAVDGLEKDKEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEET 180
           AKKLKNKKKQQQKK  KKKKSNKKENNGEE          EKEKQGDVSGNDVKGQVEET
Sbjct: 121 AKKLKNKKKQQQKK--KKKKSNKKENNGEE----------EKEKQGDVSGNDVKGQVEET 180

Query: 181 HYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240
           HYNIGSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL
Sbjct: 181 HYNIGSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240

Query: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDV 300
           SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDV
Sbjct: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDV 300

Query: 301 TEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKI 360
           TEDDLKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKI
Sbjct: 301 TEDDLKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKI 360

Query: 361 RCAVPKKGTENGGGG--AVAGAETHPEMNPEPIPETKE--AAVSVVSAVSGKIRRRTCYE 420
           RCAVPKKGTE GGGG  AVA  E HPEMN EP+PETKE  AA SVV++VSGKIRRRTCYE
Sbjct: 361 RCAVPKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYE 420

Query: 421 CGEKGHLSSNCPNKQLADSVTS 435
           CGEKGHLSSNCPNKQ ADSVTS
Sbjct: 421 CGEKGHLSSNCPNKQPADSVTS 430

[Close]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL
Match: A0A5A7U7X8 (RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00050 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 3.2e-168
Identity = 324/438 (73.97%), Postives = 333/438 (76.03%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESL+LT                                               
Sbjct: 61  SKREKRRESLILT----------------------------------------------- 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180
                                                     DVSGNDVKGQVEETHYNI
Sbjct: 121 ------------------------------------------DVSGNDVKGQVEETHYNI 180

Query: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240
           GSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT
Sbjct: 181 GSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240

Query: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300
           EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTEDD
Sbjct: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTEDD 300

Query: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360
           LKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRCAV
Sbjct: 301 LKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRCAV 349

Query: 361 PKKGTENGGGG--AVAGAETHPEMNPEPIPETKE--AAVSVVSAVSGKIRRRTCYECGEK 420
           PKKGTE GGGG  AVA  E HPEMN EP+PETKE  AA SVV++VSGKIRRRTCYECGEK
Sbjct: 361 PKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECGEK 349

Query: 421 GHLSSNCPNKQLADSVTS 435
           GHLSSNCPNKQ ADSVTS
Sbjct: 421 GHLSSNCPNKQPADSVTS 349

[Close]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL
Match: A0A6J1FSC3 (protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 9.1e-163
Identity = 331/461 (71.80%), Postives = 363/461 (78.74%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AG+ +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGKVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGL----GEKKRKRNEGVKEKNAVGGLEEDNE 120
           SKREKRRES++ T SDG N +EKKE ENQ L    GEKKRKRNE VKEK+AV GLEED+E
Sbjct: 61  SKREKRRESVISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEE 180
           KAKKLK KK +  KKK KK+K  K          K+K  E+EKEKQG   GN+V GQVEE
Sbjct: 121 KAKKLKLKKNKMNKKKKKKQKKQK----------KQKSNEEEKEKQGGEDGNEVVGQVEE 180

Query: 181 THYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAI 240
           TH NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGIAI
Sbjct: 181 THDNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAI 240

Query: 241 LSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWD 300
           LSFKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLSWD
Sbjct: 241 LSFKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLSWD 300

Query: 301 VTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVK 360
           VTEDDLKKLF NCKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRPVK
Sbjct: 301 VTEDDLKKLFANCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRPVK 360

Query: 361 IRCAVPKKGTENGGGGAVAGAE----------------------THPEMNPEPIPETKEA 420
           IRCAVPK+GT  GGG A A A                          E  P+P+PE    
Sbjct: 361 IRCAVPKQGTARGGGAAAAAAPPAFTAAAAAPPPPPPPPPAPTLAAAETLPKPVPE-MTV 420

Query: 421 AVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 435
           A S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 ADSGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 450

[Close]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL
Match: A0A6J1JA04 (protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.6e-162
Identity = 335/460 (72.83%), Postives = 368/460 (80.00%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AGR +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGRVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGL----GEKKRKRNEGVKEKNAVGGLEEDNE 120
           SKREKRRES + T SDG N +EKKE ENQ L    GEKKRKRNE VKEK+AV GLEED+E
Sbjct: 61  SKREKRRESFISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEE 180
           KAKKLK K K  +KKK K+KK  K+++N     EK K  E+EKEKQG   GN+V GQVEE
Sbjct: 121 KAKKLK-KNKMNKKKKKKQKKQKKQKSN-----EKAKNSEEEKEKQGGEDGNEVLGQVEE 180

Query: 181 THYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAI 240
           TH NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGIAI
Sbjct: 181 THDNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAI 240

Query: 241 LSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWD 300
           LSFKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLSWD
Sbjct: 241 LSFKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLSWD 300

Query: 301 VTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVK 360
           VTEDDLKKLF +CKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRPVK
Sbjct: 301 VTEDDLKKLFASCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRPVK 360

Query: 361 IRCAVPKKGTENGGGGAVA---------GAETHP------------EMNPEPIPETKEAA 420
           IRCAVPK+GT  GGG A A          A T P            E  P+P+PE    A
Sbjct: 361 IRCAVPKQGTARGGGAAAAPPPPPAFTTAAATPPPPPPPAPTLAAAETLPKPVPE-MAVA 420

Query: 421 VSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 435
            S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 DSGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 453

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: XP_031742307.1 (protein gar2 [Cucumis sativus] >KAE8647980.1 hypothetical protein Csa_000404 [Cucumis sativus])

HSP 1 Score: 810.1 bits (2091), Expect = 9.5e-231
Identity = 431/434 (99.31%), Postives = 431/434 (99.31%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAV GLEEDNEKAKKL
Sbjct: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGLEEDNEKAKKL 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180
           KNKKKQQQKKKMKKKKSNKKENNGEE  EKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI
Sbjct: 121 KNKKKQQQKKKMKKKKSNKKENNGEE--EKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180

Query: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240
           GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT
Sbjct: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240

Query: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300
           EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD
Sbjct: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300

Query: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360
           LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV
Sbjct: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360

Query: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420
           PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS
Sbjct: 361 PKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLS 420

Query: 421 SNCPNKQLADSVTS 435
           SNCPNKQLADSVTS
Sbjct: 421 SNCPNKQLADSVTS 432

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: XP_008461639.1 (PREDICTED: RNA-binding protein CP31B, chloroplastic [Cucumis melo])

HSP 1 Score: 725.3 bits (1871), Expect = 3.1e-205
Identity = 396/442 (89.59%), Postives = 407/442 (92.08%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLG----EKKRKRNEGVKEKNAVGGLEEDNEK 120
           SKREKRRESL+LTGSDGNK EKKE+ENQGLG    EKKRKRNEGVKEKNAV GLE+D EK
Sbjct: 61  SKREKRRESLILTGSDGNKNEKKEEENQGLGEMKREKKRKRNEGVKEKNAVDGLEKDKEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEET 180
           AKKLKNKKKQQQKK  KKKKSNKKENNGEE          EKEKQGDVSGNDVKGQVEET
Sbjct: 121 AKKLKNKKKQQQKK--KKKKSNKKENNGEE----------EKEKQGDVSGNDVKGQVEET 180

Query: 181 HYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240
           HYNIGSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL
Sbjct: 181 HYNIGSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240

Query: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDV 300
           SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDV
Sbjct: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDV 300

Query: 301 TEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKI 360
           TEDDLKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKI
Sbjct: 301 TEDDLKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKI 360

Query: 361 RCAVPKKGTENGGGG--AVAGAETHPEMNPEPIPETKE--AAVSVVSAVSGKIRRRTCYE 420
           RCAVPKKGTE GGGG  AVA  E HPEMN EP+PETKE  AA SVV++VSGKIRRRTCYE
Sbjct: 361 RCAVPKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYE 420

Query: 421 CGEKGHLSSNCPNKQLADSVTS 435
           CGEKGHLSSNCPNKQ ADSVTS
Sbjct: 421 CGEKGHLSSNCPNKQPADSVTS 430

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: XP_038891335.1 (protein gar2 [Benincasa hispida])

HSP 1 Score: 659.8 bits (1701), Expect = 1.6e-185
Identity = 363/442 (82.13%), Postives = 386/442 (87.33%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLK+KLREKLAESLISSVAG+D+N  VSGE DTES RKSLKELLGT   +GPRL
Sbjct: 1   MVLSNKKLKKKLREKLAESLISSVAGKDSNGDVSGEPDTESRRKSLKELLGTVCRHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLG----EKKRKRNEGVKEKNAVGGLEEDNEK 120
           SKREKRRESL+LT SDGNK EKKED N+GLG    EKKRKR+EG KEKN V GLEE+NEK
Sbjct: 61  SKREKRRESLILTASDGNKDEKKEDGNRGLGETKREKKRKRDEGAKEKNLVDGLEENNEK 120

Query: 121 AKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEET 180
           AKKLK KKKQQ+K   KKKKSNKK  NGEE          E+EKQG+VSGN+VK QVEET
Sbjct: 121 AKKLKKKKKQQKK---KKKKSNKKAKNGEE----------EEEKQGEVSGNEVKVQVEET 180

Query: 181 HYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAIL 240
           HYNIGSEF+ENLATKVYVGGIPYYSTEDDIC FFESCGTITEIDCMKFPESGKFRGIAIL
Sbjct: 181 HYNIGSEFNENLATKVYVGGIPYYSTEDDICCFFESCGTITEIDCMKFPESGKFRGIAIL 240

Query: 241 SFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDV 300
           +FKTEAAAKRALA DGADMGGLFLKVQPYKGTR NRA DFSP +VEGYNRIY+GNLSWDV
Sbjct: 241 TFKTEAAAKRALAWDGADMGGLFLKVQPYKGTRTNRAVDFSPAIVEGYNRIYLGNLSWDV 300

Query: 301 TEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKI 360
           TEDDLKKLF NCKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ IIHGRPVKI
Sbjct: 301 TEDDLKKLFANCKIASIRFGMDKETGEFRGYAHVDFSDNVSLKTALKLDQNIIHGRPVKI 360

Query: 361 RCAVPKKGTENGGGGAVAG---AETHPEMNPEPIPETKEAA-VSVVSAVSGKIRRRTCYE 420
           RCAVPKKGTE  GG A A    AETH EM+P+P+PETKEAA  +VVS+VSGKIRRRTCYE
Sbjct: 361 RCAVPKKGTERRGGEAAAAAAVAETHLEMHPDPMPETKEAAETTVVSSVSGKIRRRTCYE 420

Query: 421 CGEKGHLSSNCPNKQLADSVTS 435
           CGEKGHLSS+CP KQL DSV S
Sbjct: 421 CGEKGHLSSHCPKKQLVDSVAS 429

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: KAA0050286.1 (RNA-binding protein CP31B [Cucumis melo var. makuwa])

HSP 1 Score: 601.3 bits (1549), Expect = 6.7e-168
Identity = 324/438 (73.97%), Postives = 333/438 (76.03%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQKLREKLAESLISSVAG+DTN  VSGERDTESPRKSLKELLGTASG+GPRL
Sbjct: 1   MVLSNKKLKQKLREKLAESLISSVAGKDTNVDVSGERDTESPRKSLKELLGTASGHGPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKL 120
           SKREKRRESL+LT                                               
Sbjct: 61  SKREKRRESLILT----------------------------------------------- 120

Query: 121 KNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNI 180
                                                     DVSGNDVKGQVEETHYNI
Sbjct: 121 ------------------------------------------DVSGNDVKGQVEETHYNI 180

Query: 181 GSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240
           GSEF+ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT
Sbjct: 181 GSEFNENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 240

Query: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDD 300
           EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIY+GNLSWDVTEDD
Sbjct: 241 EAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYMGNLSWDVTEDD 300

Query: 301 LKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAV 360
           LKKLF NCKI SIRFGMDKETGEFRGYAHVDFSD ISLKTALKLDQ+IIHGRPVKIRCAV
Sbjct: 301 LKKLFSNCKIGSIRFGMDKETGEFRGYAHVDFSDSISLKTALKLDQEIIHGRPVKIRCAV 349

Query: 361 PKKGTENGGGG--AVAGAETHPEMNPEPIPETKE--AAVSVVSAVSGKIRRRTCYECGEK 420
           PKKGTE GGGG  AVA  E HPEMN EP+PETKE  AA SVV++VSGKIRRRTCYECGEK
Sbjct: 361 PKKGTEKGGGGAAAVAREEMHPEMNLEPMPETKEAQAAESVVNSVSGKIRRRTCYECGEK 349

Query: 421 GHLSSNCPNKQLADSVTS 435
           GHLSSNCPNKQ ADSVTS
Sbjct: 421 GHLSSNCPNKQPADSVTS 349

[Close]

BLAST of CSPI05G09470 vs. NCBI nr
Match: XP_022943192.1 (protein gar2 [Cucurbita moschata])

HSP 1 Score: 583.2 bits (1502), Expect = 1.9e-162
Identity = 331/461 (71.80%), Postives = 363/461 (78.74%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQK REKLAESLISS+AG+ +N  VSGE +++S  +SLKELLG    +G RL
Sbjct: 1   MVLSNKKLKQKFREKLAESLISSIAGKVSNGDVSGEPESDSRPQSLKELLGGTGRHGTRL 60

Query: 61  SKREKRRESLVLTGSDG-NKKEKKEDENQGL----GEKKRKRNEGVKEKNAVGGLEEDNE 120
           SKREKRRES++ T SDG N +EKKE ENQ L    GEKKRKRNE VKEK+AV GLEED+E
Sbjct: 61  SKREKRRESVISTASDGKNDEEKKEGENQRLGERKGEKKRKRNEEVKEKSAVDGLEEDDE 120

Query: 121 KAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEE 180
           KAKKLK KK +  KKK KK+K  K          K+K  E+EKEKQG   GN+V GQVEE
Sbjct: 121 KAKKLKLKKNKMNKKKKKKQKKQK----------KQKSNEEEKEKQGGEDGNEVVGQVEE 180

Query: 181 THYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAI 240
           TH NIGS+ +EN+ATKVYVGGIPYYSTEDDICSFFESCGTITE+DCM FPESGKFRGIAI
Sbjct: 181 THDNIGSQVNENVATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAI 240

Query: 241 LSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWD 300
           LSFKTEAAAKRALA DGADMGGLFLKVQPYKGTR N+A DFSPG+VEGYNRIY+GNLSWD
Sbjct: 241 LSFKTEAAAKRALAMDGADMGGLFLKVQPYKGTRSNKAVDFSPGIVEGYNRIYLGNLSWD 300

Query: 301 VTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVK 360
           VTEDDLKKLF NCKIASIRFGMDKETGEFRGYAHVDFSD +SLKTALKLDQ+ IHGRPVK
Sbjct: 301 VTEDDLKKLFANCKIASIRFGMDKETGEFRGYAHVDFSDSVSLKTALKLDQETIHGRPVK 360

Query: 361 IRCAVPKKGTENGGGGAVAGAE----------------------THPEMNPEPIPETKEA 420
           IRCAVPK+GT  GGG A A A                          E  P+P+PE    
Sbjct: 361 IRCAVPKQGTARGGGAAAAAAPPAFTAAAAAPPPPPPPPPAPTLAAAETLPKPVPE-MTV 420

Query: 421 AVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 435
           A S +S VSGKIRRRTCYECGEKGHLSSNCP KQ+ADSV S
Sbjct: 421 ADSGLSTVSGKIRRRTCYECGEKGHLSSNCPTKQVADSVAS 450

[Close]

BLAST of CSPI05G09470 vs. TAIR 10
Match: AT3G55340.1 (phragmoplastin interacting protein 1 )

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-73
Identity = 200/454 (44.05%), Postives = 260/454 (57.27%), Query Frame = 0


Query: 1   MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
           MVLSNKKLKQ++R+ LAESL  SV+            +T    +SLK LL ++S + PRL
Sbjct: 1   MVLSNKKLKQRIRQDLAESLSVSVS------------ETNPQSQSLKLLLDSSS-HKPRL 60

Query: 61  SKREKRRESLVLTGSDGNKKEKKEDENQGLGE-------KKRKRNEGVKEKNAVGGLEED 120
           SKREKRR        D   +E  E  N G  E       KKRKR++ V+    V  LE D
Sbjct: 61  SKREKRRNCETFAREDDEIRE-NEVGNGGSSEKTDTKIKKKRKRDDAVE----VDELEGD 120

Query: 121 NEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQV 180
            E  K+ +  +K++ KKK KK+K NK     EE   +EK K +E E   D          
Sbjct: 121 -EGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVEEKVKVEEIEVNTD---------- 180

Query: 181 EETHYNIGSEFDENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGI 240
                    E D  +  K+YVGGIPY STED+I S+F SCG I ++DC   PE G F GI
Sbjct: 181 -------NKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGI 240

Query: 241 AILSFKTEAAAKRALACDGADMGGLFLKVQPYKGT------RKNRAADFSPGLVEGYNRI 300
           A ++F TE  AKRALA D A MG  +L +Q Y  T      R+  ++ F+P +V+GYNR+
Sbjct: 241 AFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRV 300

Query: 301 YIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQK 360
           YIGNL+WD TE D++KLF +C I S+R G +KETGEF+GYAHVDF D +S+  ALKLDQ+
Sbjct: 301 YIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQ 360

Query: 361 IIHGRPVKIRCAVPKKGT------ENGGGGAVAGAETHPEMNPEPI----PETKEAAVSV 420
           +I GRPVKI CA+  +        E    G+    +T+   +P P      E  +     
Sbjct: 361 VICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEVDDGNYFA 418

Query: 421 VSAVSGKIRRRTCYECGEKGHLSSNCPNK-QLAD 431
            +  S K++RR CYECGEKGHLS+ CP K Q AD
Sbjct: 421 TTVSSSKVKRRVCYECGEKGHLSTACPIKLQKAD 418

[Close]

BLAST of CSPI05G09470 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-14
Identity = 69/234 (29.49%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 141 ENNGEEEKEKEKEKEKEKEKQGDVS-GNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIP 200
           EN+ E +   E ++ +    +GDVS G++ +G V E   +  +EF E +   K++VG + 
Sbjct: 99  ENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLA 158

Query: 201 YYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRAL-ACDGADMGG 260
           Y      +   FE  GT+   + +   E+ + RG   ++  +   A+ A+   +  D+ G
Sbjct: 159 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 218

Query: 261 LFLKVQPY--KGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIR 320
             L V     +G+R  RA    P + E   R+Y+GNL WDV    L++LF  + K+   R
Sbjct: 219 RLLTVNKAAPRGSRPERA----PRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEAR 278

Query: 321 FGMDKETGEFRGYAHVDFSDGISLKTALK-LDQKIIHGRPVKIRCA---VPKKG 365
              D+ETG  RG+  V  SD   L  A+  LD + + GR +++  A    P++G
Sbjct: 279 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328

[Close]

BLAST of CSPI05G09470 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-13
Identity = 60/211 (28.44%), Postives = 97/211 (45.97%), Query Frame = 0


Query: 155 EKEKEKQGDVSGNDVKGQVEETHYNIGSEFDE-NLATKVYVGGIPYYSTEDDICSFFESC 214
           E+E+ + G + G  V    E      G  F E     K++VG +PY      +   FE  
Sbjct: 78  EEEEGEDGSIGGTSVTVD-ESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQA 137

Query: 215 GTITEIDCMKFPESGKFRGIAILSFKT-EAAAKRALACDGADMGGLFLKVQ--PYKGTRK 274
           GT+   + +   ++ + RG   ++  T E A K     +  ++ G  L V     +G+R 
Sbjct: 138 GTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRP 197

Query: 275 NRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLF-VNCKIASIRFGMDKETGEFRGYAH 334
            R     P + +   RIY+GNL WDV    L++LF  + K+   R   D+ETG  RG+  
Sbjct: 198 ER----QPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGF 257

Query: 335 VDFSDGISLKTAL-KLDQKIIHGRPVKIRCA 360
           V  S+   +  A+  LD + + GR +K+  A
Sbjct: 258 VQMSNENEVNVAIAALDGQNLEGRAIKVNVA 283

[Close]

BLAST of CSPI05G09470 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 44.3 bits (103), Expect = 2.9e-04
Identity = 81/340 (23.82%), Postives = 158/340 (46.47%), Query Frame = 0


Query: 62  KREKRRESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVGGLEEDNEKAKKLK 121
           +R++ R S      D  K   KE+ N     K R+R+   K++++ G    D+EK +  +
Sbjct: 76  ERDRHRSSREHRDRDREKDVDKEERN----GKDRERDRD-KDRDSKG---RDHEKDRSRR 135

Query: 122 NKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIG 181
           ++ + ++ +  +++KS + E    E K++++++ + K+K+ D                + 
Sbjct: 136 SRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKED---------------KVE 195

Query: 182 SEFD-ENLATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKT 241
            E D E     V+   I   +TE D+  FF   G + ++  +    S + RGI  + F  
Sbjct: 196 PEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYD 255

Query: 242 EAAAKRALACDGADMGGLFLKVQPYKG----TRKNRAADFSPGLVEGYN----RIYIGNL 301
             +   A+A  G  + G  + V+P +      +   AA  + G++  Y+    R+Y+GNL
Sbjct: 256 TMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNL 315

Query: 302 SWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKI-IHG 361
             +++EDDL+K+F +     +      ETG  +G+  V F+     + AL L+ ++ I G
Sbjct: 316 HINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAG 375

Query: 362 RPVKI-----RCAVPKKG--------TENGGGGAVAGAET 379
           R +K+     +  VP+ G         ++ GGG    A++
Sbjct: 376 RAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQS 392

[Close]

BLAST of CSPI05G09470 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.9e-04
Identity = 65/281 (23.13%), Postives = 121/281 (43.06%), Query Frame = 0


Query: 128 QKKKMKKKKSNKKENNGEEEKEKEKEKEKEKEKQGDVSGNDVKGQVEE------THYNIG 187
           +++++++ +  ++E++ +++   +  +E+E E  GD  G D++   EE       H +I 
Sbjct: 6   EEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDDNHIDIE 65

Query: 188 SEFDENL----------------------ATKVYVGGIPYYSTEDDICSFFESCGTITEI 247
           +  D+                         ++V++GG+P    E+D+    E  G I E+
Sbjct: 66  TADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEV 125

Query: 248 DCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPG 307
             MK  +SG  +G A ++FKT+  A++A+           L  + +KG            
Sbjct: 126 RLMKDRDSGDSKGYAFVAFKTKDVAQKAIE---------ELHSKEFKG------KTIRCS 185

Query: 308 LVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHV--------D 367
           L E  NR++IGN+  + TED+ +K+     I  +  G    T   RG+A V        D
Sbjct: 186 LSETKNRLFIGNIPKNWTEDEFRKV-----IEDVGPGDPTNTTRNRGFAFVLYYNNACAD 245

Query: 368 FSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGA 373
           +S    + +  KL+     G    +  A PK   E+    A
Sbjct: 246 YSRQKMIDSNFKLE-----GNAPTVTWADPKSSPEHSAAAA 261

The following BLAST results are available for this feature:

BLAST of CSPI05G09470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B8	5.5e-72	44.05	Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE...	[more]
P07909	2.8e-15	27.23	Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN...	[more]
P51989	1.5e-13	26.60	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
Q04836	3.4e-13	29.49	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A...	[more]
P48810	1.7e-12	24.31	Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster OX=7227 G...	[more]

BLAST of CSPI05G09470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT8	2.6e-226	89.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180870 PE=4 SV=1	[more]
A0A1S3CF29	1.5e-205	89.59	RNA-binding protein CP31B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500194...	[more]
A0A5A7U7X8	3.2e-168	73.97	RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1FSC3	9.1e-163	71.80	protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1	[more]
A0A6J1JA04	1.6e-162	72.83	protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1	[more]

BLAST of CSPI05G09470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742307.1	9.5e-231	99.31	protein gar2 [Cucumis sativus] >KAE8647980.1 hypothetical protein Csa_000404 [Cu...	[more]
XP_008461639.1	3.1e-205	89.59	PREDICTED: RNA-binding protein CP31B, chloroplastic [Cucumis melo]	[more]
XP_038891335.1	1.6e-185	82.13	protein gar2 [Benincasa hispida]	[more]
KAA0050286.1	6.7e-168	73.97	RNA-binding protein CP31B [Cucumis melo var. makuwa]	[more]
XP_022943192.1	1.9e-162	71.80	protein gar2 [Cucurbita moschata]	[more]

BLAST of CSPI05G09470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55340.1	3.9e-73	44.05	phragmoplastin interacting protein 1	[more]
AT4G24770.1	2.4e-14	29.49	31-kDa RNA binding protein	[more]
AT5G50250.1	3.5e-13	28.44	chloroplast RNA-binding protein 31B	[more]
AT2G16940.1	2.9e-04	23.82	Splicing factor, CC1-like	[more]
AT4G00830.3	2.9e-04	23.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..161
None	No IPR available	GENE3D	4.10.60.10		coord: 402..430 e-value: 1.9E-7 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..137
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 63..432
None	No IPR available	PANTHER	PTHR23236:SF24	PHRAGMOPLASTIN INTERACTING PROTEIN 1-RELATED	coord: 63..432
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 286..357 e-value: 5.0E-19 score: 79.2 coord: 191..263 e-value: 2.8E-18 score: 76.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 287..355 e-value: 5.4E-12 score: 45.4 coord: 192..258 e-value: 5.2E-12 score: 45.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 285..361 score: 14.69226
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 190..267 score: 13.737158
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 409..425 e-value: 1.4E-4 score: 31.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 408..425 e-value: 8.7E-6 score: 25.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 410..425 score: 10.691135
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 106..275 e-value: 3.6E-24 score: 87.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 281..369 e-value: 6.9E-22 score: 79.5
IPR034362	PHIP1, RNA recognition motif 2	CDD	cd12272	RRM2_PHIP1	coord: 286..356 e-value: 7.49658E-32 score: 114.026
IPR034361	PHIP1, RNA recognition motif 1	CDD	cd12271	RRM1_PHIP1	coord: 192..263 e-value: 2.18913E-38 score: 131.322
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 282..371
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 185..273
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 404..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09470.1	CSPI05G09470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding