CSPI05G09360 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G09360
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein of unknown function (DUF674)
Location	Chr5: 7909624 .. 7909959 (+)
RNA-Seq Expression	CSPI05G09360
Synteny	CSPI05G09360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTACTTCTAATTCTAAAGAAGAAATGAGTTTGAAGCTTTTTATAGACAAATCTAAGCGAAAGATTCTATTCGCTGAGGCGGACAAGAGCTTCATCGACTTCCTTTTCGCCATCCTCACTCTTCCCATCTCCTCAATCCTCGGCCTTGTACCTGTTGGAGCCAAAGCTGGCCCATTTACAAATCTTTACAATAGCGTCGAAAACTTGGATGCAGTCAACTATTTTCAAGAAAACCATTTAAAAAACAATTTGCTAAAGCCTAAGCTTCATATCCCGAAATCTCGCATACCCCTTTTCCCAATCAACGACTTTCTTTTAAATAAATGGTAA

mRNA sequence

ATGTCTTCTACTTCTAATTCTAAAGAAGAAATGAGTTTGAAGCTTTTTATAGACAAATCTAAGCGAAAGATTCTATTCGCTGAGGCGGACAAGAGCTTCATCGACTTCCTTTTCGCCATCCTCACTCTTCCCATCTCCTCAATCCTCGGCCTTGTACCTGTTGGAGCCAAAGCTGGCCCATTTACAAATCTTTACAATAGCGTCGAAAACTTGGATGCAGTCAACTATTTTCAAGAAAACCATTTAAAAAACAATTTGCTAAAGCCTAAGCTTCATATCCCGAAATCTCGCATACCCCTTTTCCCAATCAACGACTTTCTTTTAAATAAATGGTAA

Coding sequence (CDS)

ATGTCTTCTACTTCTAATTCTAAAGAAGAAATGAGTTTGAAGCTTTTTATAGACAAATCTAAGCGAAAGATTCTATTCGCTGAGGCGGACAAGAGCTTCATCGACTTCCTTTTCGCCATCCTCACTCTTCCCATCTCCTCAATCCTCGGCCTTGTACCTGTTGGAGCCAAAGCTGGCCCATTTACAAATCTTTACAATAGCGTCGAAAACTTGGATGCAGTCAACTATTTTCAAGAAAACCATTTAAAAAACAATTTGCTAAAGCCTAAGCTTCATATCCCGAAATCTCGCATACCCCTTTTCCCAATCAACGACTTTCTTTTAAATAAATGGTAA

Protein sequence

MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPFTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW*

Homology

[Close]

BLAST of CSPI05G09360 vs. ExPASy TrEMBL
Match: A0A0A0KLT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180315 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60
           MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP
Sbjct: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60

Query: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW 112
           FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW
Sbjct: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW 111

[Close]

BLAST of CSPI05G09360 vs. ExPASy TrEMBL
Match: A0A103YIL4 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_011783 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.3e-14
Identity = 43/99 (43.43%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 2   SSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPF 61
           +S+S++  ++SLKL +DK  +K++FAEADK F+DFLF IL+LP+ +++ L+   +  G  
Sbjct: 3   ASSSSTSSQISLKLLVDKKDQKVIFAEADKQFVDFLFHILSLPVGTVIKLLTKNSMVGSI 62

Query: 62  TNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPL 101
            NLY+S+ENL +  Y Q N  KN++L PK+    +++PL
Sbjct: 63  GNLYHSIENL-SDTYMQPNQSKNSVLNPKIANVGTQVPL 100

[Close]

BLAST of CSPI05G09360 vs. ExPASy TrEMBL
Match: A0A022R8S5 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a022824mg PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 7   SKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPFTNLYN 66
           ++  +SLKL I+   +++LFAEA K F+DFLF IL+LP+ +++ L+      G   NLY 
Sbjct: 2   AESTLSLKLLINSQSKRVLFAEAGKDFVDFLFYILSLPVGTVINLLKKQENIGSLANLYE 61

Query: 67  SVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPIND 106
           S+ENL+   Y Q N  K  +LKP   +P S IPL  +ND
Sbjct: 62  SIENLNE-TYIQPNKTKEAILKPVATVPGSNIPLLALND 99

[Close]

BLAST of CSPI05G09360 vs. ExPASy TrEMBL
Match: A0A2U1PEV0 (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA161430 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-13
Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60
           MS++S+   +++LKL ID   +K+LFAEA+K F+DFLF IL+LP+ +++ L+   +  G 
Sbjct: 1   MSASSSDSAKVTLKLLIDTKSKKVLFAEANKEFVDFLFHILSLPVGTVIKLLRKNSMVGA 60

Query: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPIND 106
             NLY+S+ENL +  Y Q + +K  +L PK+ +   ++PL   ND
Sbjct: 61  LGNLYDSIENL-SNTYMQSDDMKEAILNPKVTMHGDQVPLLLAND 104

[Close]

BLAST of CSPI05G09360 vs. ExPASy TrEMBL
Match: A0A5N6L8Y9 (Ribosomal_L23eN domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_45488 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-13
Identity = 44/104 (42.31%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60
           M+++S+S  ++SLKL ID   +K+LFAEA K F+DFLF IL+LP+ +++ L+   +  G 
Sbjct: 1   MAASSSSSTKVSLKLLIDVKSKKVLFAEASKEFVDFLFHILSLPVGTVIKLLRKNSMVGS 60

Query: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPIN 105
             NLY+S+ENL +  Y Q N  K+ +L PK+    + +PL  +N
Sbjct: 61  LGNLYDSIENLSS-TYMQPNQSKDVILNPKIANYGAHVPLLSLN 103

[Close]

BLAST of CSPI05G09360 vs. NCBI nr
Match: KGN50518.1 (hypothetical protein Csa_000321 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 3.1e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60
           MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP
Sbjct: 1   MSSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP 60

Query: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW 112
           FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW
Sbjct: 61  FTNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPINDFLLNKW 111

[Close]

BLAST of CSPI05G09360 vs. NCBI nr
Match: KAF7131614.1 (hypothetical protein RHSIM_Rhsim09G0159000 [Rhododendron simsii])

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-14
Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 5   SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPFTNL 64
           ++S +++SLKL ID    K+LFAEA K F+DFLF +L+LP+ S++ L+   +  G   NL
Sbjct: 233 ASSSKQVSLKLLIDTKNNKVLFAEAGKDFVDFLFTLLSLPVGSVIRLLTAKSMVGCLGNL 292

Query: 65  YNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPIND 106
           Y S+EN++   Y Q NH K +LLKPK  +    +PL   +D
Sbjct: 293 YGSIENMNE-TYMQPNHKKEDLLKPKAVVTSKEVPLLLTDD 332

[Close]

BLAST of CSPI05G09360 vs. NCBI nr
Match: KAG5533312.1 (hypothetical protein RHGRI_027487 [Rhododendron griersonianum])

HSP 1 Score: 87.8 bits (216), Expect = 6.4e-14
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 5   SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPFTNL 64
           ++S +++SLKL ID    K+LFAEA K F+DFLF +L+LP+ S++ L+   +  G   NL
Sbjct: 2   ASSSKKVSLKLLIDTKNNKVLFAEAGKDFVDFLFTLLSLPVGSVIRLLTAKSMVGCLGNL 61

Query: 65  YNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPLFPIND 106
           Y S+EN++   Y Q NH K++LLKPK  +    +PL   +D
Sbjct: 62  YGSIENMND-TYMQPNHNKDDLLKPKAVVSSKEVPLLLTDD 101

[Close]

BLAST of CSPI05G09360 vs. NCBI nr
Match: XP_024979838.1 (uncharacterized protein LOC112516836 [Cynara cardunculus var. scolymus])

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13
Identity = 43/99 (43.43%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 2   SSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPF 61
           +S+S++  ++SLKL +DK  +K++FAEADK F+DFLF IL+LP+ +++ L+   +  G  
Sbjct: 3   ASSSSTSSQISLKLLVDKKDQKVIFAEADKQFVDFLFHILSLPVGTVIKLLTKNSMVGSI 62

Query: 62  TNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPL 101
            NLY+S+ENL +  Y Q N  KN++L PK+    +++PL
Sbjct: 63  GNLYHSIENL-SDTYMQPNQSKNSVLNPKIANVGTQVPL 100

[Close]

BLAST of CSPI05G09360 vs. NCBI nr
Match: KVI09806.1 (Protein of unknown function DUF674 [Cynara cardunculus var. scolymus])

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-13
Identity = 43/99 (43.43%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 2   SSTSNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGPF 61
           +S+S++  ++SLKL +DK  +K++FAEADK F+DFLF IL+LP+ +++ L+   +  G  
Sbjct: 3   ASSSSTSSQISLKLLVDKKDQKVIFAEADKQFVDFLFHILSLPVGTVIKLLTKNSMVGSI 62

Query: 62  TNLYNSVENLDAVNYFQENHLKNNLLKPKLHIPKSRIPL 101
            NLY+S+ENL +  Y Q N  KN++L PK+    +++PL
Sbjct: 63  GNLYHSIENL-SDTYMQPNQSKNSVLNPKIANVGTQVPL 100

[Close]

BLAST of CSPI05G09360 vs. TAIR 10
Match: AT5G01130.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 61.6 bits (148), Expect = 4.6e-10
Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 5  SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP---- 64
          S+ + ++SL+LFID+ K K++ AEA K+F+D LF++LTLP+ +I+ L+    ++ P    
Sbjct: 4  SSEEPKVSLRLFIDEEKNKVVLAEASKAFVDVLFSLLTLPMGTIIRLLEEHRESQPITVG 63

Query: 65 -FTNLYNSVENLDAVNYFQENHLKNNLLKPK 91
           F+NLY SV  +  ++ F+ +  K+ LL P+
Sbjct: 64 CFSNLYRSVAEM-GIDNFKTDVCKHILLHPR 93

[Close]

BLAST of CSPI05G09360 vs. TAIR 10
Match: AT3G09140.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 5   SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKA-----G 64
           S   +++S++L ID+ K K++ AE+ K F+D LF+ L LP+ +I+ L+    K+     G
Sbjct: 4   STKSKKLSVRLLIDELKNKVVLAESGKDFVDVLFSFLALPMGTIVRLLEKHQKSPQVGIG 63

Query: 65  PFTNLYNSVENLDAVNYFQENHLKNNLLKPK-LHIPKSRIPLFPIND 106
            F NLY SV  +D +  FQ    K  LL P+ +++ K R     I+D
Sbjct: 64  CFNNLYKSVSEMD-LESFQTEACKQVLLYPRSVNLEKFRNMKLKIDD 109

[Close]

BLAST of CSPI05G09360 vs. TAIR 10
Match: AT3G09140.2 (Protein of unknown function (DUF674) )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 5   SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKA-----G 64
           S   +++S++L ID+ K K++ AE+ K F+D LF+ L LP+ +I+ L+    K+     G
Sbjct: 4   STKSKKLSVRLLIDELKNKVVLAESGKDFVDVLFSFLALPMGTIVRLLEKHQKSPQVGIG 63

Query: 65  PFTNLYNSVENLDAVNYFQENHLKNNLLKPK-LHIPKSRIPLFPIND 106
            F NLY SV  +D +  FQ    K  LL P+ +++ K R     I+D
Sbjct: 64  CFNNLYKSVSEMD-LESFQTEACKQVLLYPRSVNLEKFRNMKLKIDD 109

[Close]

BLAST of CSPI05G09360 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08
Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 5  SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLV-----PVGAKAG 64
          S  K + SL+L ID+ K +++ AEA K F+D L ++LTLP+ +I+ L+     P  +  G
Sbjct: 4  SFEKPKFSLRLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVG 63

Query: 65 PFTNLYNSVENLDAVNYFQENHLKNNLLKPK 91
             NLY SV ++D V+ F+    K+ LL P+
Sbjct: 64 CLHNLYKSVADMD-VDNFESQACKHFLLHPR 93

[Close]

BLAST of CSPI05G09360 vs. TAIR 10
Match: AT5G01150.1 (Protein of unknown function (DUF674) )

HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 33/91 (36.26%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 5  SNSKEEMSLKLFIDKSKRKILFAEADKSFIDFLFAILTLPISSILGLVPVGAKAGP---- 64
          S+ + + SL+L +D+ K K++ AEA + F+D LF++LTLP+ +I+ L+    K+ P    
Sbjct: 4  SSEEPKFSLRLIVDEEKNKVVLAEACRDFVDVLFSLLTLPMGTIVRLLENHRKSEPVTLG 63

Query: 65 -FTNLYNSVENLDAVNYFQENHLKNNLLKPK 91
           F NLY SV ++ + + F+    K  L+ PK
Sbjct: 64 CFNNLYRSVVDMGS-DCFETEACKQMLVYPK 93

The following BLAST results are available for this feature:

BLAST of CSPI05G09360 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G09360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLT0	1.5e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180315 PE=4 SV=1	[more]
A0A103YIL4	5.3e-14	43.43	Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_011...	[more]
A0A022R8S5	2.0e-13	43.43	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a022824mg PE...	[more]
A0A2U1PEV0	2.6e-13	40.95	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA161430 PE=4 SV=1	[more]
A0A5N6L8Y9	2.6e-13	42.31	Ribosomal_L23eN domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N8...	[more]

BLAST of CSPI05G09360 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50518.1	3.1e-53	100.00	hypothetical protein Csa_000321 [Cucumis sativus]	[more]
KAF7131614.1	3.8e-14	43.56	hypothetical protein RHSIM_Rhsim09G0159000 [Rhododendron simsii]	[more]
KAG5533312.1	6.4e-14	43.56	hypothetical protein RHGRI_027487 [Rhododendron griersonianum]	[more]
XP_024979838.1	1.1e-13	43.43	uncharacterized protein LOC112516836 [Cynara cardunculus var. scolymus]	[more]
KVI09806.1	1.1e-13	43.43	Protein of unknown function DUF674 [Cynara cardunculus var. scolymus]	[more]

BLAST of CSPI05G09360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01130.1	4.6e-10	38.46	Protein of unknown function (DUF674)	[more]
AT3G09140.1	1.1e-08	35.51	Protein of unknown function (DUF674)	[more]
AT3G09140.2	1.1e-08	35.51	Protein of unknown function (DUF674)	[more]
AT3G09110.1	1.9e-08	38.46	Protein of unknown function (DUF674)	[more]
AT5G01150.1	4.3e-08	36.26	Protein of unknown function (DUF674)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007750	Protein of unknown function DUF674	PFAM	PF05056	DUF674	coord: 4..91 e-value: 3.0E-20 score: 72.5
IPR007750	Protein of unknown function DUF674	PANTHER	PTHR33103	OS01G0153900 PROTEIN	coord: 8..95
None	No IPR available	PANTHER	PTHR33103:SF49	DUF674 FAMILY PROTEIN	coord: 8..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09360.1	CSPI05G09360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane