CSPI05G09080 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G09080
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	serine/arginine-rich splicing factor RS2Z32-like isoform X2
Location	Chr5: 7688290 .. 7690862 (-)
RNA-Seq Expression	CSPI05G09080
Synteny	CSPI05G09080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGCTTACGGAAATCATTTTTGCGAAAGACGTGAAATTTAGGGTTTCGTATCCTTATTGTTTCCAGGTTCGCCTCGCCTCCCCTACGATTTTTCTAGGTTTTCTCTCCTCGAATCCTCCGACTCCATATTTCCACAGCATTTCTCTGTTGATTGTTTTTGCTCAATCGCCGTTTTGTATGTTCTATATTTTTCTTATTAAATAAATTTATTGGATTTTTCTCTTCGATTTGTCAAATTGTTGAATTGTGTATATTTTCACTTGTTTCAACGTATTTCTGATTTGAATACTGGCACAAGTAATTGGTTTTTAAATTATGTCGTTGATTGTGGTGCTGTGGTTGTTTATTTTAGATAAAATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGGTATGCCAATTTTTGCTGGGTGTAATCCGATATTGATCGAATTTGTGTGCTAAATATAATTTGATGAATACGGAAAGTTTGTGTGTTTAGTTGTGTCTTTTTCTTTCCTTCTATTGGCCGGTTTTGCTATTGCTAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCATGAGGTATTTGCCAAGCCCTTTTTTGGGTGCACGACTGTGAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGATGATGGGTCTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGGTACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGTATGTATTTCTTTCCCTACACTTCTTTCATTTTTATTTAAGCTATTCCTGTAATATAAAATGATATATGCTAGGATCCTTTCTCTATACTTAATGGCGCATATTAATTTTTGCAAGCGTGATCTTTTTCTTGGTCTATTTGCTTAAACATCTGATATCAGGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTATGTTCCATTATCTTTCCTGACAAACCTTTCATGAACTTTTTAATTTCTTTCAGACAAGTTACCTCTGCTTTTTCCAGACTAGTCTTCGTTTTTATCCTTTTAAGTGGTTAACTATGTTTATCATCTATGGAGAATTAATAACTGATATGTAATTTTGAATTATTATTTTGGTGTATGGAACTTGGATGATAATATCCTTCACGTTCTTTTGTAATTGTACTCTTTTTATAGTCTCATTTGTTCATTTTTATAAAGGCTATGTGTAGTTTTCCTGGCTTGTGCAGGTAAGTTGAAGCTTGTTTATATCTTGTATTTTAATTTTGTGAACTATTTTTATTTCTTTTGAATGTAATGAAAAACTCCAATTTTGATTTAGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGTATGTTATCTTTTTTATTTTTCTTTCACTTCCCTTTTAATTTTTCCCTGTTGATCATTCTGAATGAAAAAATTGTATGGCACAGGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGGTTTGTTTCAATTGAACCATCTTCCTCTAGTATGGTATTGAAGTTTTCATCTTCCTTCACAGCCTTCTTGAGTAACAATTAAGTATTTTACTTGAGGCTTTATTACTCCCAGATTGAGCATTTGTGTATTGTGTCCACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAATGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAATGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAA

mRNA sequence

ATGGAGCAGCTTACGGAAATCATTTTTGCGAAAGACGTGAAATTTAGGGTTTCGTATCCTTATTGTTTCCAGGTTCGCCTCGCCTCCCCTACGATTTTTCTAGGTTTTCTCTCCTCGAATCCTCCGACTCCATATTTCCACAGCATTTCTCTGTTGATTGTTTTTGCTCAATCGCCGTTTTATAAAATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAATGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAATGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAA

Coding sequence (CDS)

ATGGAGCAGCTTACGGAAATCATTTTTGCGAAAGACGTGAAATTTAGGGTTTCGTATCCTTATTGTTTCCAGGTTCGCCTCGCCTCCCCTACGATTTTTCTAGGTTTTCTCTCCTCGAATCCTCCGACTCCATATTTCCACAGCATTTCTCTGTTGATTGTTTTTGCTCAATCGCCGTTTTATAAAATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAATGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAATGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAA

Protein sequence

MEQLTEIIFAKDVKFRVSYPYCFQVRLASPTIFLGFLSSNPPTPYFHSISLLIVFAQSPFYKMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG*

Homology

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BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.0e-79
Identity = 193/324 (59.57%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 182
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 183 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 242
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 243 SRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 302
           SRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D             
Sbjct: 181 SRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD------------- 240

Query: 303 PGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPL-------P 362
               D  SP+    SP    +   + G D +GG       ++NG +   SP+        
Sbjct: 241 ----DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 363 REERSPVND--EDNNGSPRGGSES 371
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

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BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.6e-78
Identity = 182/279 (65.23%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 182
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 183 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 242
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 243 SYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSP 302
           SYSRSRSPV+R++S+E   RS K   RS SP+GR      SLSP  K +  SP   +R  
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QSLSPDRKVIDASP---KRGS 240

Query: 303 EEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 322
           + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 241 DYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 269

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BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-22
Identity = 99/245 (40.41%), Postives = 125/245 (51.02%), Query Frame = 0


Query: 63  MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 122
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 123 ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 182
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 183 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSR 242
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRR 180

Query: 243 SRS-PVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 301
           SRS  +K  RS  RS  RSRS     S +  S SP PK          RSP    RRS S
Sbjct: 181 SRSGSIKGSRSRSRSRSRSRSLSRPRSSRSKSRSPSPKR--------SRSPSGSPRRSAS 235

[Close]

BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20
Identity = 97/245 (39.59%), Postives = 127/245 (51.84%), Query Frame = 0


Query: 63  MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 122
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 123 ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 182
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 183 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSR 242
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRR 180

Query: 243 SRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPD-ERSPEEDARRSLS 301
           SRS   +     +S  RSRS R RS  +  S     ++  RSP+P   RSP    RRS S
Sbjct: 181 SRSGSIKGSRYFQSPSRSRS-RSRSISRPRS----SRSKSRSPSPKRSRSPSGSPRRSAS 238

[Close]

BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot
Match: Q23121 (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=6239 GN=rsp-1 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-20
Identity = 111/328 (33.84%), Postives = 140/328 (42.68%), Query Frame = 0


Query: 74  RLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 133
           R+Y+GRL+SR   +D++  F  YG++RDV +K  + FVEF D RDA+DA + LNG+++ G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 134 SRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARD---------------- 193
            R+I++ +K  PRG GG R   G G  G  R  +    G   RD                
Sbjct: 64  ERVILDYSK--PRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 123

Query: 194 ------------------CKAGDWKNKCYRCG-----ERGHIEKN----CQNSPKKLKR- 253
                                 D K++  R G        H   N    C  +P  LKR 
Sbjct: 124 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRC 183

Query: 254 -----------------------------GSYSRSPSPRRGRSRSRSYSRGRSYSRSRSP 313
                                         S SRS S  R R RSRS S  RS SRSRSP
Sbjct: 184 IEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP 243

Query: 314 VKRDRSLERSDKRSRSPRGRSSPKRHSLSP--PPKAMKRSPTPDERSPEEDARRSLSPGN 327
            KR R   +S  RSRS R RS+  R S SP   PK + RSP+P                 
Sbjct: 244 PKRSRRESKSKSRSRS-RSRSADNRKSRSPSRSPKKVDRSPSPP---------------- 303

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BLAST of CSPI05G09080 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 1.3e-205
Identity = 370/371 (99.73%), Postives = 370/371 (99.73%), Query Frame = 0


Query: 1   MEQLTEIIFAKDVKFRVSYPYCFQVRLASPTIFLGFLSSNPPTPYFHSISLLIVFAQSPF 60
           MEQLTEIIFAKDVKFRVSYPYCFQVRLASPTIFLGFLSSNPPTPYFHSI LLIVFAQSPF
Sbjct: 1   MEQLTEIIFAKDVKFRVSYPYCFQVRLASPTIFLGFLSSNPPTPYFHSIFLLIVFAQSPF 60

Query: 61  YKMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDAD 120
           YKMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDAD
Sbjct: 61  YKMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDAD 120

Query: 121 DARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKA 180
           DARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKA
Sbjct: 121 DARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKA 180

Query: 181 GDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSP 240
           GDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSP
Sbjct: 181 GDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSP 240

Query: 241 VKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRD 300
           VKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRD
Sbjct: 241 VKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRD 300

Query: 301 SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 360
           SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN
Sbjct: 301 SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDN 360

Query: 361 NGSPRGGSESG 372
           NGSPRGGSESG
Sbjct: 361 NGSPRGGSESG 371

[Close]

BLAST of CSPI05G09080 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.6e-168
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 302
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 303 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 362
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 363 SPRGGSES 371
           SPRGGSES
Sbjct: 301 SPRGGSES 308

[Close]

BLAST of CSPI05G09080 vs. ExPASy TrEMBL
Match: A0A5A7SS39 (Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00080 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.4e-164
Identity = 309/337 (91.69%), Postives = 309/337 (91.69%), Query Frame = 0


Query: 62  KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------ 121
           KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                        
Sbjct: 17  KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSG 76

Query: 122 ----RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 181
               RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE
Sbjct: 77  TNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 136

Query: 182 YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS 241
           YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS
Sbjct: 137 YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS 196

Query: 242 RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK 301
           RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK
Sbjct: 197 RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK 256

Query: 302 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 361
           AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY
Sbjct: 257 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 316

Query: 362 RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 371
           RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 317 RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 353

[Close]

BLAST of CSPI05G09080 vs. ExPASy TrEMBL
Match: A0A1S3BD24 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.2e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 123 ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 182
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 183 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 242
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 243 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 302
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 303 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 362
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 363 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 371
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 336

[Close]

BLAST of CSPI05G09080 vs. ExPASy TrEMBL
Match: A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.6e-155
Identity = 297/329 (90.27%), Postives = 303/329 (92.10%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR--GRSRSRSYSRGRSYSRSRSP 242
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR  GRSRSRSYSRGRSYSRSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 243 VKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRD 302
           +KR+RSLERS+KRSRSPRGR SPKRHSLSPPPKAMKRSPTPDERSPEE ARRS SPGNRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPPKAMKRSPTPDERSPEE-ARRSPSPGNRD 240

Query: 303 -------------------SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYS 362
                              SRSPRGRSRSPRGRSRSPMDE EDF+ GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

Query: 363 RSPSPLPREERSPVNDEDNNGSPRGGSES 371
           RSPSPLPREERSP+NDEDNNG+PRGGSES
Sbjct: 301 RSPSPLPREERSPINDEDNNGTPRGGSES 327

[Close]

BLAST of CSPI05G09080 vs. NCBI nr
Match: XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])

HSP 1 Score: 602.8 bits (1553), Expect = 2.0e-168
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 302
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 303 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 362
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 363 SPRGGSESG 372
           SPRGGSESG
Sbjct: 301 SPRGGSESG 309

[Close]

BLAST of CSPI05G09080 vs. NCBI nr
Match: XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])

HSP 1 Score: 600.9 bits (1548), Expect = 7.5e-168
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 302
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 303 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 362
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 363 SPRGGSES 371
           SPRGGSES
Sbjct: 301 SPRGGSES 308

[Close]

BLAST of CSPI05G09080 vs. NCBI nr
Match: KAA0034024.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 588.2 bits (1515), Expect = 5.0e-164
Identity = 309/337 (91.69%), Postives = 309/337 (91.69%), Query Frame = 0


Query: 62  KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------ 121
           KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                        
Sbjct: 17  KMPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSG 76

Query: 122 ----RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 181
               RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE
Sbjct: 77  TNLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSRE 136

Query: 182 YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS 241
           YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS
Sbjct: 137 YLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYS 196

Query: 242 RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK 301
           RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK
Sbjct: 197 RSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPK 256

Query: 302 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 361
           AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY
Sbjct: 257 AMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNY 316

Query: 362 RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 371
           RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 317 RREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 353

[Close]

BLAST of CSPI05G09080 vs. NCBI nr
Match: XP_011654929.1 (serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011654930.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_031741873.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 6.6e-164
Identity = 309/337 (91.69%), Postives = 309/337 (91.69%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 123 ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 182
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 183 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 242
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 243 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 302
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 303 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 362
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 363 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG 372
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG 337

[Close]

BLAST of CSPI05G09080 vs. NCBI nr
Match: XP_008445803.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445804.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445805.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo])

HSP 1 Score: 585.9 bits (1509), Expect = 2.5e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 122
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 123 ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 182
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 183 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 242
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 243 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 302
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 303 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 362
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 363 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 371
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 336

[Close]

BLAST of CSPI05G09080 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 296.6 bits (758), Expect = 2.8e-80
Identity = 193/324 (59.57%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 182
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 183 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 242
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 243 SRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 302
           SRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D             
Sbjct: 181 SRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD------------- 240

Query: 303 PGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPL-------P 362
               D  SP+    SP    +   + G D +GG       ++NG +   SP+        
Sbjct: 241 ----DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 363 REERSPVND--EDNNGSPRGGSES 371
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

[Close]

BLAST of CSPI05G09080 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-79
Identity = 182/279 (65.23%), Postives = 206/279 (73.84%), Query Frame = 0


Query: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 182
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 183 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 242
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 243 SYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSP 302
           SYSRSRSPV+R++S+E   RS K   RS SP+GR      SLSP  K +  SP   +R  
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QSLSPDRKVIDASP---KRGS 240

Query: 303 EEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 322
           + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 241 DYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 269

[Close]

BLAST of CSPI05G09080 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 221.9 bits (564), Expect = 8.8e-58
Identity = 156/283 (55.12%), Postives = 182/283 (64.31%), Query Frame = 0


Query: 104 MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 163
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 164 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----S 223
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    S
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRS 120

Query: 224 PRRGRSRSRSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMK 283
           PRR RS SRS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  
Sbjct: 121 PRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARD 180

Query: 284 RSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRRE 343
           RSP  D                 D  SP+    SP    +   + G D +GG       +
Sbjct: 181 RSPVLD-----------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----Q 240

Query: 344 ENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 371
           +NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 241 DNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248

[Close]

BLAST of CSPI05G09080 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 219.2 bits (557), Expect = 5.7e-57
Identity = 145/238 (60.92%), Postives = 167/238 (70.17%), Query Frame = 0


Query: 104 MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 163
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 164 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP--- 223
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP   
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKS 120

Query: 224 -SPRRGR--SRSRSYSRGRSYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHS 283
            SPRR R  SRSRSYSRGRSYSRSRSPV+R++S+E   RS K   RS SP+GR      S
Sbjct: 121 RSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QS 180

Query: 284 LSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 322
           LSP  K +  SP   +R  + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 181 LSPDRKVIDASP---KRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 228

[Close]

BLAST of CSPI05G09080 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-53
Identity = 148/275 (53.82%), Postives = 174/275 (63.27%), Query Frame = 0


Query: 112 EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 171
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 172 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRS 231
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS S
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPS 139

Query: 232 RSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDER 291
           RS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D  
Sbjct: 140 RSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD-- 199

Query: 292 SPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSP 351
                          D  SP+    SP    +   + G D +GG       ++NG +   
Sbjct: 200 ---------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVV 259

Query: 352 SPL-------PREERSPVND--EDNNGSPRGGSES 371
           SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 260 SPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259

The following BLAST results are available for this feature:

BLAST of CSPI05G09080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYA5	4.0e-79	59.57	Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9FYB7	2.6e-78	65.23	Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q3T106	4.4e-22	40.41	Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1	[more]
Q16629	1.4e-20	39.59	Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=...	[more]
Q23121	1.9e-20	33.84	Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=62...	[more]

BLAST of CSPI05G09080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS31	1.3e-205	99.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1	[more]
A0A1S3BDJ7	3.6e-168	100.00	serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3...	[more]
A0A5A7SS39	2.4e-164	91.69	Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var....	[more]
A0A1S3BD24	1.2e-163	91.67	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3...	[more]
A0A6J1CET7	4.6e-155	90.27	serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant...	[more]

BLAST of CSPI05G09080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143594.1	2.0e-168	100.00	serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004...	[more]
XP_008445806.1	7.5e-168	100.00	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ...	[more]
KAA0034024.1	5.0e-164	91.69	serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. m...	[more]
XP_011654929.1	6.6e-164	91.69	serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011...	[more]
XP_008445803.1	2.5e-163	91.67	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis ...	[more]

BLAST of CSPI05G09080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37340.1	2.8e-80	59.57	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.2	1.8e-79	65.23	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.3	8.8e-58	55.12	arginine/serine-rich zinc knuckle-containing protein 33	[more]
AT3G53500.1	5.7e-57	60.92	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT2G37340.2	8.5e-53	53.82	arginine/serine-rich zinc knuckle-containing protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 74..139 e-value: 2.0E-19 score: 80.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 75..136 e-value: 8.9E-15 score: 54.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 73..143 score: 17.216459
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 186..202 e-value: 0.0022 score: 27.3 coord: 164..180 e-value: 2.9E-4 score: 30.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 164..179 e-value: 2.6E-6 score: 27.3 coord: 185..201 e-value: 2.3E-4 score: 21.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 186..202 score: 10.575755
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 164..179 score: 10.147202
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 63..149 e-value: 1.9E-22 score: 81.3
None	No IPR available	GENE3D	4.10.60.10		coord: 184..224 e-value: 1.7E-5 score: 26.4 coord: 156..183 e-value: 2.0E-6 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..231
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 68..352
None	No IPR available	PANTHER	PTHR23147:SF152	SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33	coord: 68..352
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 157..203
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 69..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09080.1	CSPI05G09080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding