CSPI05G08790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G08790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	(thale cress) hypothetical protein
Location	Chr5: 7458118 .. 7458555 (+)
RNA-Seq Expression	CSPI05G08790
Synteny	CSPI05G08790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATGTTTGATTAGTAATCAGATCTAAGTTCAATTCTTCACTGTACTGCTGTTTGTGACTTTGTGTATGTAAATTCTGTACTATGAGTTTAAACTTCAATACTCTATGGGTGAATCATTTTTCCAGTTATATTCTCTGTCCTACAAGTTTTTGTGCATTCAATCAAATAGACTGACCTTCAAAGTTCGCTGCCATGATGATTCCTCAATCCTTCTGCAGCTGCAATGCTTGA

mRNA sequence

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATTTCGCTGCCATGATGATTCCTCAATCCTTCTGCAGCTGCAATGCTTGA

Coding sequence (CDS)

ATGGGTTTGGTGGTGGTGATCTCTCTGCCTTTGATTTTCTTCTGCTTGTTGCTTGGTTTCGGATGTTACTTTCTAGGCCGAGCAAAAGGGAGACAAGACATACGGACTAATGCACAGATATTCGGTGTGCCCACGCCGCCACCTGGTAGTGGTGCAGCTCATTCGCCATCATCACTGCAGCCGGTTTTCAAACCTGAAAATACCACCAATTTCGCTGCCATGATGATTCCTCAATCCTTCTGCAGCTGCAATGCTTGA

Protein sequence

MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQPVFKPENTTNFAAMMIPQSFCSCNA*

Homology

[Close]

BLAST of CSPI05G08790 vs. ExPASy TrEMBL
Match: A0A0A0KRY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTN 71
          PVFKPENTTN
Sbjct: 61 PVFKPENTTN 70

[Close]

BLAST of CSPI05G08790 vs. ExPASy TrEMBL
Match: A0A5A7SXY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00410 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTN 71
          PVFKPENTTN
Sbjct: 61 PVFKPENTTN 70

[Close]

BLAST of CSPI05G08790 vs. ExPASy TrEMBL
Match: A0A1S3BED6 (uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTN 71
          PVFKPENTTN
Sbjct: 61 PVFKPENTTN 70

[Close]

BLAST of CSPI05G08790 vs. ExPASy TrEMBL
Match: A0A6J1KB93 (uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-24
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S  Q
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTN 71
          P+FKP+N+ N
Sbjct: 61 PIFKPDNSIN 70

[Close]

BLAST of CSPI05G08790 vs. ExPASy TrEMBL
Match: A0A6J1JJX6 (uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 6.3e-23
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGS  AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSRLAHPPPPPE 60

Query: 61 PVFKPENTTN 71
          P+FKP+N+ N
Sbjct: 61 PLFKPDNSAN 70

[Close]

BLAST of CSPI05G08790 vs. NCBI nr
Match: XP_004143612.1 (uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical protein Csa_000697 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 7.6e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60

Query: 61 PVFKPENTTN 71
          PVFKPENTTN
Sbjct: 61 PVFKPENTTN 70

[Close]

BLAST of CSPI05G08790 vs. NCBI nr
Match: XP_008445862.1 (PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 uncharacterized protein E6C27_scaffold65G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 3.8e-30
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTN 71
          PVFKPENTTN
Sbjct: 61 PVFKPENTTN 70

[Close]

BLAST of CSPI05G08790 vs. NCBI nr
Match: XP_038891972.1 (uncharacterized protein LOC120081297 [Benincasa hispida])

HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSS Q
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSQQ 60

Query: 61 PVFKPENTTN 71
          PVFKP+N+TN
Sbjct: 61 PVFKPDNSTN 70

[Close]

BLAST of CSPI05G08790 vs. NCBI nr
Match: XP_022999592.1 (uncharacterized protein LOC111493917 [Cucurbita maxima])

HSP 1 Score: 120.2 bits (300), Expect = 9.0e-24
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLV+VISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQ FGVP PPP S AAHS S  Q
Sbjct: 1  MGLVMVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQTFGVPMPPPSSAAAHSLSPQQ 60

Query: 61 PVFKPENTTN 71
          P+FKP+N+ N
Sbjct: 61 PIFKPDNSIN 70

[Close]

BLAST of CSPI05G08790 vs. NCBI nr
Match: KAG7030778.1 (hypothetical protein SDJN02_04815, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MG+VVVISLPLI FC LLGFGCYFLGRAKGRQDIRTNAQ+FGVP PPPGSG AH P   +
Sbjct: 1  MGMVVVISLPLILFCFLLGFGCYFLGRAKGRQDIRTNAQVFGVPAPPPGSGLAHPPPPPE 60

Query: 61 PVFKPENTTN 71
          P+FKP+N+ +
Sbjct: 61 PLFKPDNSAH 70

[Close]

BLAST of CSPI05G08790 vs. TAIR 10
Match: AT1G31335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-22
Identity = 49/70 (70.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1  MGLVVVISLPLIFFCLLLGFGCYFLGRAKGRQDIRTNAQIFGVPTPPPGSGAAHSPSSLQ 60
          MGLVVVISLPLIFFCLLLGFGCYFLG+++GR++IRTN Q++G P PPPG+ AA SP  L 
Sbjct: 1  MGLVVVISLPLIFFCLLLGFGCYFLGKSRGRREIRTNPQVYGAPAPPPGAIAASSP-PLS 60

Query: 61 PVFKPENTTN 71
          P  KP+N+ N
Sbjct: 61 PHAKPDNSHN 69

The following BLAST results are available for this feature:

BLAST of CSPI05G08790 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G08790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRY6	3.7e-31	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175840 PE=4 SV=1	[more]
A0A5A7SXY6	1.8e-30	98.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BED6	1.8e-30	98.57	uncharacterized protein LOC103488752 OS=Cucumis melo OX=3656 GN=LOC103488752 PE=...	[more]
A0A6J1KB93	4.3e-24	82.86	uncharacterized protein LOC111493917 OS=Cucurbita maxima OX=3661 GN=LOC111493917...	[more]
A0A6J1JJX6	6.3e-23	77.14	uncharacterized protein LOC111485766 OS=Cucurbita maxima OX=3661 GN=LOC111485766...	[more]

BLAST of CSPI05G08790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143612.1	7.6e-31	100.00	uncharacterized protein LOC101203814 [Cucumis sativus] >KGN50461.1 hypothetical ...	[more]
XP_008445862.1	3.8e-30	98.57	PREDICTED: uncharacterized protein LOC103488752 [Cucumis melo] >KAA0034055.1 unc...	[more]
XP_038891972.1	2.4e-29	95.71	uncharacterized protein LOC120081297 [Benincasa hispida]	[more]
XP_022999592.1	9.0e-24	82.86	uncharacterized protein LOC111493917 [Cucurbita maxima]	[more]
KAG7030778.1	5.8e-23	77.14	hypothetical protein SDJN02_04815, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CSPI05G08790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31335.1	5.2e-22	70.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33727:SF17	BNAANNG31340D PROTEIN	coord: 1..70
None	No IPR available	PANTHER	PTHR33727	OS07G0446900 PROTEIN	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G08790.1	CSPI05G08790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane