CSPI05G07980 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G07980
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Beta-galactosidase
Location	Chr5: 6781613 .. 6782220 (-)
RNA-Seq Expression	CSPI05G07980
Synteny	CSPI05G07980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAGCTTCAATGGTTTGTCCCAACTCTAGCTTGCTTGACTTTTTGCATGGGAGATAATGTTTCATATGATTCAAATGCGATAATTATCAATGGAGAACGACGTATTATTTTCTCAAGCTCAATTCATTATCCACGCAGCACTGAAGCAATGTGGCCTGACCTTATTCAGAAAGCTAAAGATGGTGGACTTGATGCAATTGACACATACATTTTTTGGGATCGTCACGAGCCACAACGACGAAAATATGATTTCTCTGGACGTTTAGATTTTATTAAATTCTTCCAGCTTATCCAAGATGCTGGACTTATGTTGTCATGAGGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCTGTGTGGTTGCATAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTCTACAATAATGAAATGCAAACTTTCACGACAAAGATAGTTAATATGTGTAAACAAGCCAACCTCTTTGCTTCACAAGGAGGGCCAATAATATTGGCTCAAATCGAGAATGAGTATGAAAATGTGATGACACCAACTTATGGAGATGCAGGAAAAACATATATCAATTGGTGTGCTCAAATGGCTTAA

mRNA sequence

ATGTTTAAGCTTCAATGGTTTGTCCCAACTCTAGCTTGCTTGACTTTTTGCATGGGAGATAATGTTTCATATGATTCAAATGCGATAATTATCAATGGAGAACGACGTATTATTTTCTCAAGCTCAATTCATTATCCACGCAGCACTGAAGCAATGTGGCCTGACCTTATTCAGAAAGCTAAAGATGCTTATCCAAGATGCTGGACTTATGTTGTCATGAGGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCTGTGTGGTTGCATAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTCTACAATAATGAAATGCAAACTTTCACGACAAAGATAGTTAATATGTGTAAACAAGCCAACCTCTTTGCTTCACAAGGAGGGCCAATAATATTGGCTCAAATCGAGAATGAGTATGAAAATGTGATGACACCAACTTATGGAGATGCAGGAAAAACATATATCAATTGGTGTGCTCAAATGGCTTAA

Coding sequence (CDS)

ATGTTTAAGCTTCAATGGTTTGTCCCAACTCTAGCTTGCTTGACTTTTTGCATGGGAGATAATGTTTCATATGATTCAAATGCGATAATTATCAATGGAGAACGACGTATTATTTTCTCAAGCTCAATTCATTATCCACGCAGCACTGAAGCAATGTGGCCTGACCTTATTCAGAAAGCTAAAGATGCTTATCCAAGATGCTGGACTTATGTTGTCATGAGGATTGGTCCTTATGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCTGTGTGGTTGCATAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTCTACAATAATGAAATGCAAACTTTCACGACAAAGATAGTTAATATGTGTAAACAAGCCAACCTCTTTGCTTCACAAGGAGGGCCAATAATATTGGCTCAAATCGAGAATGAGTATGAAAATGTGATGACACCAACTTATGGAGATGCAGGAAAAACATATATCAATTGGTGTGCTCAAATGGCTTAA

Protein sequence

MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKDAYPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQMA*

Homology

[Close]

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 3.9e-50
Identity = 104/199 (52.26%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 4   LQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKD- 63
           L  F   +  L+      VS+D  AI ING+RRI+ S SIHYPRST  MWPDLI KAKD 
Sbjct: 10  LSLFFILITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDG 69

Query: 64  ----------------------------------AYPRCWTYVVMRIGPYVCAEWNYGGF 123
                                                    Y V+RIGPYVCAEWNYGGF
Sbjct: 70  GLDAIETYVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYSVLRIGPYVCAEWNYGGF 129

Query: 124 PVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVM 168
           PVWLHNMP ++ RT N  + NEMQ FTTKIV M K+  LFASQGGPIILAQIENEY NV+
Sbjct: 130 PVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVI 189

[Close]

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.1e-50
Identity = 101/181 (55.80%), Postives = 115/181 (63.54%), Query Frame = 0


Query: 22  VSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKD------------------- 81
           VS+D  AI I+G+RRI+ S SIHYPRST  MWPDLI KAKD                   
Sbjct: 27  VSHDERAITIDGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIETYVFWNAHEPSR 86

Query: 82  ----------------AYPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQV 141
                                  Y V+RIGPYVCAEWNYGGFPVWLHNMP ++ RT N  
Sbjct: 87  RQYDFSGNLDLVRFIKTIQSAGLYSVLRIGPYVCAEWNYGGFPVWLHNMPDMKFRTINPG 146

Query: 142 YNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQM 168
           + NEMQ FTTKIVNM K+ +LFASQGGPIILAQIENEY NV++ +YG  GK YI+WCA M
Sbjct: 147 FMNEMQNFTTKIVNMMKEESLFASQGGPIILAQIENEYGNVIS-SYGAEGKAYIDWCANM 206

[Close]

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot
Match: Q9C6W4 (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-49
Identity = 100/181 (55.25%), Postives = 115/181 (63.54%), Query Frame = 0


Query: 22  VSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKD-AYPRCWTYV--------- 81
           VS+D  AI I+G RR++ S SIHYPRST  MWPDLI+K K+ +     TYV         
Sbjct: 22  VSHDGRAITIDGHRRVLLSGSIHYPRSTTEMWPDLIKKGKEGSLDAIETYVFWNAHEPTR 81

Query: 82  -------------------------VMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQV 141
                                    V+RIGPYVCAEWNYGGFPVWLHNMPG++ RT N  
Sbjct: 82  RQYDFSGNLDLIRFLKTIQNEGMYGVLRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTA 141

Query: 142 YNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQM 168
           + NEMQ FTT IV M K+  LFASQGGPIILAQIENEY NV+  +YG+AGK YI WCA M
Sbjct: 142 FMNEMQNFTTMIVEMVKKEKLFASQGGPIILAQIENEYGNVI-GSYGEAGKAYIQWCANM 201

[Close]

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot
Match: Q9SCV4 (Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-47
Identity = 92/182 (50.55%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 21  NVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKDA----------------- 80
           NV+YD  A++I+G+R+++ S SIHYPRST  MWP+LIQK+KD                  
Sbjct: 31  NVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEPE 90

Query: 81  ------------------YPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQ 140
                               +   YV +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+
Sbjct: 91  KNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNE 150

Query: 141 VYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQ 168
            +  EMQ FTTKIV++ KQ  L+ASQGGPIIL+QIENEY N+    YG A K+YI W A 
Sbjct: 151 PFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNI-DSAYGAAAKSYIKWSAS 210

[Close]

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-45
Identity = 92/182 (50.55%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 21  NVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKD------------------ 80
           NV+YD  A++I+G RR++ S SIHYPRST  MWP LIQK+KD                  
Sbjct: 32  NVTYDHRAVVIDGVRRVLVSGSIHYPRSTPDMWPGLIQKSKDGGLDVIETYVFWDIHEAV 91

Query: 81  -----------------AYPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQ 140
                            A      YV +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+
Sbjct: 92  RGQYDFEGRKDLVRFVKAVADAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNE 151

Query: 141 VYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQ 168
            +  EMQ FT K+V+  K A L+ASQGGPIIL+QIENEY N+    YG AGK Y+ W A 
Sbjct: 152 AFKAEMQRFTEKVVDTMKGAGLYASQGGPIILSQIENEYGNI-DSAYGAAGKAYMRWAAG 211

[Close]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL
Match: A0A0A0KRM6 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.8e-82
Identity = 154/202 (76.24%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQWFVPTLACLTFCM DNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWFVPTLACLTFCMRDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL
Match: A0A5D3CWN8 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001010 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 145/167 (86.83%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW + TLACLTFC+GDNVSYDSNAIIING+RRIIFS SIHYPRSTEAMWP L +K 
Sbjct: 1   MFKLQWVIATLACLTFCIGDNVSYDSNAIIINGQRRIIFSCSIHYPRSTEAMWPVLFKKL 60

Query: 61  KDAYPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVN 120
           K        YVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVN
Sbjct: 61  KMLIQDAGLYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVN 120

Query: 121 MCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQMA 168
           MCKQANLFASQGGPIILAQIENEY NVMTP YGDAGK YINWCAQMA
Sbjct: 121 MCKQANLFASQGGPIILAQIENEYGNVMTPAYGDAGKAYINWCAQMA 167

[Close]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL
Match: A0A5D3DUP4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00870 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.8e-81
Identity = 152/202 (75.25%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL
Match: A0A5A7V9Y9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00750 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.8e-81
Identity = 152/202 (75.25%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL
Match: A0A0A0M006 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 151/202 (74.75%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNA+IINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNALIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFGARREPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. NCBI nr
Match: TYK16321.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81
Identity = 145/167 (86.83%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW + TLACLTFC+GDNVSYDSNAIIING+RRIIFS SIHYPRSTEAMWP L +K 
Sbjct: 1   MFKLQWVIATLACLTFCIGDNVSYDSNAIIINGQRRIIFSCSIHYPRSTEAMWPVLFKKL 60

Query: 61  KDAYPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVN 120
           K        YVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVN
Sbjct: 61  KMLIQDAGLYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVN 120

Query: 121 MCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQMA 168
           MCKQANLFASQGGPIILAQIENEY NVMTP YGDAGK YINWCAQMA
Sbjct: 121 MCKQANLFASQGGPIILAQIENEYGNVMTPAYGDAGKAYINWCAQMA 167

[Close]

BLAST of CSPI05G07980 vs. NCBI nr
Match: XP_031741738.1 (beta-galactosidase 7-like [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80
Identity = 152/202 (75.25%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCLGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. NCBI nr
Match: KAA0062481.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 152/202 (75.25%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. NCBI nr
Match: TYK27403.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 152/202 (75.25%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNAIIINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. NCBI nr
Match: XP_011648551.2 (LOW QUALITY PROTEIN: beta-galactosidase 15 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 3.5e-80
Identity = 151/202 (74.75%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MFKLQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKA 60
           MFKLQW V TLACLTFC+GDNVSYDSNA+IINGERRIIFS SIHYPRSTEAMWPDLIQKA
Sbjct: 1   MFKLQWLVATLACLTFCIGDNVSYDSNALIINGERRIIFSGSIHYPRSTEAMWPDLIQKA 60

Query: 61  KDA-----------------------------------YPRCWTYVVMRIGPYVCAEWNY 120
           KD                                          YVVMRIGPYVCAEWNY
Sbjct: 61  KDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAGLYVVMRIGPYVCAEWNY 120

Query: 121 GGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYE 168
           GGFPVWLHNMPGIQLRTNNQVY NEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEY 
Sbjct: 121 GGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYG 180

[Close]

BLAST of CSPI05G07980 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 104/199 (52.26%), Postives = 118/199 (59.30%), Query Frame = 0


Query: 4   LQWFVPTLACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKD- 63
           L  F   +  L+      VS+D  AI ING+RRI+ S SIHYPRST  MWPDLI KAKD 
Sbjct: 10  LSLFFILITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDG 69

Query: 64  ----------------------------------AYPRCWTYVVMRIGPYVCAEWNYGGF 123
                                                    Y V+RIGPYVCAEWNYGGF
Sbjct: 70  GLDAIETYVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYSVLRIGPYVCAEWNYGGF 129

Query: 124 PVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVM 168
           PVWLHNMP ++ RT N  + NEMQ FTTKIV M K+  LFASQGGPIILAQIENEY NV+
Sbjct: 130 PVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVI 189

[Close]

BLAST of CSPI05G07980 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 )

HSP 1 Score: 198.4 bits (503), Expect = 4.7e-51
Identity = 104/210 (49.52%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 3   KLQWFVPTLACLTFCM----------GDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAM 62
           K ++++ T+  L+F +             VS+D  AI I+G RR++ S SIHYPRST  M
Sbjct: 16  KRKFYITTMVSLSFILCCVLVSSCAYATIVSHDGRAITIDGHRRVLLSGSIHYPRSTTEM 75

Query: 63  WPDLIQKAKD-AYPRCWTYV----------------------------------VMRIGP 122
           WPDLI+K K+ +     TYV                                  V+RIGP
Sbjct: 76  WPDLIKKGKEGSLDAIETYVFWNAHEPTRRQYDFSGNLDLIRFLKTIQNEGMYGVLRIGP 135

Query: 123 YVCAEWNYGGFPVWLHNMPGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIIL 168
           YVCAEWNYGGFPVWLHNMPG++ RT N  + NEMQ FTT IV M K+  LFASQGGPIIL
Sbjct: 136 YVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQGGPIIL 195

[Close]

BLAST of CSPI05G07980 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 188.7 bits (478), Expect = 3.7e-48
Identity = 92/182 (50.55%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 21  NVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKDA----------------- 80
           NV+YD  A++I+G+R+++ S SIHYPRST  MWP+LIQK+KD                  
Sbjct: 31  NVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEPE 90

Query: 81  ------------------YPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQ 140
                               +   YV +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+
Sbjct: 91  KNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNE 150

Query: 141 VYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQ 168
            +  EMQ FTTKIV++ KQ  L+ASQGGPIIL+QIENEY N+    YG A K+YI W A 
Sbjct: 151 PFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNI-DSAYGAAAKSYIKWSAS 210

[Close]

BLAST of CSPI05G07980 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 )

HSP 1 Score: 188.7 bits (478), Expect = 3.7e-48
Identity = 92/182 (50.55%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 21  NVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKDA----------------- 80
           NV+YD  A++I+G+R+++ S SIHYPRST  MWP+LIQK+KD                  
Sbjct: 25  NVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEPE 84

Query: 81  ------------------YPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQ 140
                               +   YV +RIGPYVCAEWNYGGFPVWLH +PGI+ RT+N+
Sbjct: 85  KNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNE 144

Query: 141 VYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDAGKTYINWCAQ 168
            +  EMQ FTTKIV++ KQ  L+ASQGGPIIL+QIENEY N+    YG A K+YI W A 
Sbjct: 145 PFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNI-DSAYGAAAKSYIKWSAS 204

[Close]

BLAST of CSPI05G07980 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 177.9 bits (450), Expect = 6.6e-45
Identity = 94/192 (48.96%), Postives = 112/192 (58.33%), Query Frame = 0


Query: 11  LACLTFCMGDNVSYDSNAIIINGERRIIFSSSIHYPRSTEAMWPDLIQKAKDA------- 70
           L  L   +  +VSYDS AI ING+RRI+ S SIHYPRST  MWPDLI+KAK+        
Sbjct: 23  LGFLVCSVSGSVSYDSRAITINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQT 82

Query: 71  ----------------------------YPRCWTYVVMRIGPYVCAEWNYGGFPVWLHNM 130
                                         +   Y+ +RIGPYVCAEWN+GGFPVWL  +
Sbjct: 83  YVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVCAEWNFGGFPVWLKYI 142

Query: 131 PGIQLRTNNQVYNNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYENVMTPTYGDA 168
           PGI  RT+N  +  +MQ FTTKIVNM K   LF SQGGPIIL+QIENEY   M    G  
Sbjct: 143 PGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEY-GPMEYELGAP 202

The following BLAST results are available for this feature:

BLAST of CSPI05G07980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV5	3.9e-50	52.26	Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2	[more]
P49676	5.1e-50	55.80	Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1	[more]
Q9C6W4	1.9e-49	55.25	Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1	[more]
Q9SCV4	5.2e-47	50.55	Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2	[more]
Q10NX8	2.2e-45	50.55	Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE...	[more]

BLAST of CSPI05G07980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM6	6.8e-82	76.24	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1	[more]
A0A5D3CWN8	1.2e-81	86.83	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00...	[more]
A0A5D3DUP4	9.8e-81	75.25	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G0...	[more]
A0A5A7V9Y9	9.8e-81	75.25	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A0A0M006	1.7e-80	74.75	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1	[more]

BLAST of CSPI05G07980 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16321.1	2.4e-81	86.83	beta-galactosidase 7-like [Cucumis melo var. makuwa]	[more]
XP_031741738.1	1.6e-80	75.25	beta-galactosidase 7-like [Cucumis sativus]	[more]
KAA0062481.1	2.0e-80	75.25	beta-galactosidase 7-like [Cucumis melo var. makuwa]	[more]
TYK27403.1	2.0e-80	75.25	beta-galactosidase 7-like [Cucumis melo var. makuwa]	[more]
XP_011648551.2	3.5e-80	74.75	LOW QUALITY PROTEIN: beta-galactosidase 15 [Cucumis sativus]	[more]

BLAST of CSPI05G07980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20710.1	2.8e-51	52.26	beta-galactosidase 7	[more]
AT1G31740.1	4.7e-51	49.52	beta-galactosidase 15	[more]
AT2G28470.1	3.7e-48	50.55	beta-galactosidase 8	[more]
AT2G28470.2	3.7e-48	50.55	beta-galactosidase 8	[more]
AT3G13750.1	6.6e-45	48.96	beta galactosidase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001944	Glycoside hydrolase, family 35	PRINTS	PR00742	GLHYDRLASE35	coord: 53..71 score: 38.39 coord: 32..49 score: 61.76
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 70..167 coord: 13..63
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 16..64 e-value: 6.4E-12 score: 47.5
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 69..167 e-value: 1.2E-31 score: 112.5
None	No IPR available	PANTHER	PTHR23421:SF88	BETA-GALACTOSIDASE 14	coord: 13..63
None	No IPR available	PANTHER	PTHR23421:SF88	BETA-GALACTOSIDASE 14	coord: 70..167
IPR031330	Glycoside hydrolase 35, catalytic domain	PFAM	PF01301	Glyco_hydro_35	coord: 29..62 e-value: 3.6E-8 score: 33.4 coord: 70..166 e-value: 1.5E-32 score: 113.5
IPR019801	Glycoside hydrolase, family 35, conserved site	PROSITE	PS01182	GLYCOSYL_HYDROL_F35	coord: 132..144
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 19..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G07980.1	CSPI05G07980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005773	vacuole
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds