CSPI05G07870 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G07870
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	serine/threonine-protein kinase TIO
Location	Chr5: 6706812 .. 6707432 (-)
RNA-Seq Expression	CSPI05G07870
Synteny	CSPI05G07870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTCTGTAAAGCTTTCATACTAAACTATTAACCTATTAATAAGACTGCTAAGGAAGTTGGAAACTGATAGAGCCGAATATAGAAGTTTTCTTCATATTATTGATATAATTTTAGTGATATACCTGGACTCCAACATTTCCATTTATTCAATCTGTTTTCGTAGTGCTTTGAAACACATTATTCTGATGTTTATTTTAGAGTGTTGTGGTTAGATTGAATGGCAATAGAACCAGACTGGAATTTTGTGACAATGAAATTCTTATACATTAATAATCTGGTTTACTGTTAGATATTGTCATTTCAGAATTATAGTTATGCACTCATTTCTCTTGTTGACCCGTAAAGTTATATATATATATGTTATATACAGGCTTTGTTAAAGTTGGTGGCTGACTGTTCGGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTCTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCCCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

mRNA sequence

ATGCAGGCTTTGTTAAAGTTGGTGGCTGACTGTTCGGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTCTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCCCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

Coding sequence (CDS)

ATGCAGGCTTTGTTAAAGTTGGTGGCTGACTGTTCGGCAGTAGCCTTGAATCCAAGCAGAAAAGATGCAGCTAATGAGTCTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCCCACACACACCGTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATCGGGCAGCTTCGGCAATCCCCAGAGTCCATAATCGCCAAATATGCTTCTGTAATTGTCAGAAAGGTTGCTGAAACTTGA

Protein sequence

MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQLRQSPESIIAKYASVIVRKVAET*

Homology

[Close]

BLAST of CSPI05G07870 vs. ExPASy Swiss-Prot
Match: Q2QAV0 (Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.0e-24
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCP-HTPCRQFLLSSKLFPVIG 60
            +Q LL+LVADCS +ALNPS+K+ A+ESPLKIALFSLAKMC  H  CRQF+ SS+LFPVI 
Sbjct: 1238 LQTLLRLVADCSTLALNPSKKETASESPLKIALFSLAKMCSNHQICRQFVKSSELFPVIA 1297

Query: 61   QLRQSPESIIAKYASVIVRKVA 82
            +L+QSPE+ IA YASVIV KV+
Sbjct: 1298 RLKQSPEANIAHYASVIVAKVS 1319

[Close]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL
Match: A0A0A0KKZ6 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G169060 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC HTPCRQFLLSSKLFPVIGQ
Sbjct: 1199 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQ 1258

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIVRKVAET
Sbjct: 1259 LRQSPESIIAKYASVIVRKVAET 1281

[Close]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL
Match: A0A0A0KRL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169020 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
          MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC HTPCRQFLLSSKLFPVIGQ
Sbjct: 1  MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQ 60

Query: 61 LRQSPESIIAKYASVIVRKVAET 84
          LRQSPESIIAKYASVIVRKVAET
Sbjct: 61 LRQSPESIIAKYASVIVRKVAET 83

[Close]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL
Match: A0A5D3DB34 (Serine/threonine-protein kinase TIO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001460 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 946  MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQ 1005

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1006 LRQSPESIIAKYASVIVSKVAET 1028

[Close]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL
Match: A0A1S3CT86 (serine/threonine-protein kinase TIO OS=Cucumis melo OX=3656 GN=LOC103504676 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 1266 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQ 1325

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1326 LRQSPESIIAKYASVIVSKVAET 1348

[Close]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL
Match: A0A6J1I1E7 (serine/threonine-protein kinase TIO OS=Cucurbita maxima OX=3661 GN=LOC111469005 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.5e-33
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPS+KDAANESPLKIALFSLAKMC H PCRQFL+SSKLFPVIGQ
Sbjct: 1263 MQALLKLVADCSAVALNPSKKDAANESPLKIALFSLAKMCAHAPCRQFLVSSKLFPVIGQ 1322

Query: 61   LRQSPESIIAKYASVIVRKVAE 83
            LRQSPESIIAKYASVIV KVAE
Sbjct: 1323 LRQSPESIIAKYASVIVSKVAE 1344

[Close]

BLAST of CSPI05G07870 vs. NCBI nr
Match: XP_011654867.2 (serine/threonine-protein kinase TIO [Cucumis sativus] >KGN49838.2 hypothetical protein Csa_000633 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-34
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC HTPCRQFLLSSKLFPVIGQ
Sbjct: 1266 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHTPCRQFLLSSKLFPVIGQ 1325

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1326 LRQSPESIIAKYASVIVSKVAET 1348

[Close]

BLAST of CSPI05G07870 vs. NCBI nr
Match: XP_038874587.1 (serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida] >XP_038874588.1 serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 1265 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHAPCRQFLLSSKLFPVIGQ 1324

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1325 LRQSPESIIAKYASVIVSKVAET 1347

[Close]

BLAST of CSPI05G07870 vs. NCBI nr
Match: XP_038874586.1 (serine/threonine-protein kinase TIO isoform X1 [Benincasa hispida])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 1271 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHAPCRQFLLSSKLFPVIGQ 1330

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1331 LRQSPESIIAKYASVIVSKVAET 1353

[Close]

BLAST of CSPI05G07870 vs. NCBI nr
Match: KAA0055117.1 (serine/threonine-protein kinase TIO [Cucumis melo var. makuwa] >TYK20743.1 serine/threonine-protein kinase TIO [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 946  MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQ 1005

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1006 LRQSPESIIAKYASVIVSKVAET 1028

[Close]

BLAST of CSPI05G07870 vs. NCBI nr
Match: XP_008467295.1 (PREDICTED: serine/threonine-protein kinase TIO [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCPHTPCRQFLLSSKLFPVIGQ 60
            MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMC H PCRQFLLSSKLFPVIGQ
Sbjct: 1266 MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCSHAPCRQFLLSSKLFPVIGQ 1325

Query: 61   LRQSPESIIAKYASVIVRKVAET 84
            LRQSPESIIAKYASVIV KVAET
Sbjct: 1326 LRQSPESIIAKYASVIVSKVAET 1348

[Close]

BLAST of CSPI05G07870 vs. TAIR 10
Match: AT1G50240.2 (Protein kinase family protein with ARM repeat domain )

HSP 1 Score: 110.9 bits (276), Expect = 4.9e-25
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1    MQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCP-HTPCRQFLLSSKLFPVIG 60
            +Q LL+LVADCS +ALNPS+K+ A+ESPLKIALFSLAKMC  H  CRQF+ SS+LFPVI 
Sbjct: 1238 LQTLLRLVADCSTLALNPSKKETASESPLKIALFSLAKMCSNHQICRQFVKSSELFPVIA 1297

Query: 61   QLRQSPESIIAKYASVIVRKVA 82
            +L+QSPE+ IA YASVIV KV+
Sbjct: 1298 RLKQSPEANIAHYASVIVAKVS 1319

The following BLAST results are available for this feature:

BLAST of CSPI05G07870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QAV0	7.0e-24	70.73	Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana OX=3702 GN=TIO PE=1 ...	[more]

BLAST of CSPI05G07870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKZ6	1.8e-35	98.80	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G169...	[more]
A0A0A0KRL2	1.8e-35	98.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169020 PE=4 SV=1	[more]
A0A5D3DB34	3.5e-34	96.39	Serine/threonine-protein kinase TIO OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CT86	3.5e-34	96.39	serine/threonine-protein kinase TIO OS=Cucumis melo OX=3656 GN=LOC103504676 PE=4...	[more]
A0A6J1I1E7	6.5e-33	93.90	serine/threonine-protein kinase TIO OS=Cucurbita maxima OX=3661 GN=LOC111469005 ...	[more]

BLAST of CSPI05G07870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654867.2	1.9e-34	97.59	serine/threonine-protein kinase TIO [Cucumis sativus] >KGN49838.2 hypothetical p...	[more]
XP_038874587.1	7.1e-34	96.39	serine/threonine-protein kinase TIO isoform X2 [Benincasa hispida] >XP_038874588...	[more]
XP_038874586.1	7.1e-34	96.39	serine/threonine-protein kinase TIO isoform X1 [Benincasa hispida]	[more]
KAA0055117.1	7.1e-34	96.39	serine/threonine-protein kinase TIO [Cucumis melo var. makuwa] >TYK20743.1 serin...	[more]
XP_008467295.1	7.1e-34	96.39	PREDICTED: serine/threonine-protein kinase TIO [Cucumis melo]	[more]

BLAST of CSPI05G07870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50240.2	4.9e-25	70.73	Protein kinase family protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22983	PROTEIN KINASE RELATED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G07870.1	CSPI05G07870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity