CSPI05G05790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G05790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	C2 domain-containing protein
Location	Chr5: 5270175 .. 5270827 (+)
RNA-Seq Expression	CSPI05G05790
Synteny	CSPI05G05790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAGTCCAAACTCTCATTTTATTTCCTTCGAAAATCAAAATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGATCATAGTTCTTTTAGTTGAACATATAATATCAAAAAACATGCATTTAGATTACAACACATCTGGAATTGATCAGTATTTTTGTGTATTATTTCAAATGACTTTTTAGAATGAGAAAA

mRNA sequence

AAAGAGTCCAAACTCTCATTTTATTTCCTTCGAAAATCAAAATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGATCATAGTTCTTTTAGTTGAACATATAATATCAAAAAACATGCATTTAGATTACAACACATCTGGAATTGATCAGTATTTTTGTGTATTATTTCAAATGACTTTTTAGAATGAGAAAA

Coding sequence (CDS)

ATGTCTTATCCAAAGCTTATTCTTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAAATTCCTCCTCCATCTTCTCTCTCCACCGCCCTTTCCGGCCCTTTCTTATTCTCTCCACCGTGCCCGACGACGGTGGTTTTCTCCCCTCAAATCCCATTTACCACTTTGGCGACCTCTTTCGCATTCCTTTGGATGTTGGTTTTTTCCCCAACAGATGTTTTATTTTCCTCCGCCTCTTCTCAAAGCGGCTTCTTTTTGGCCCGGCTCTCATTGGATGGTGCCGGATGCCGGCCGACGATATCAGCCAGTTGCCGGTGGGTTCGGTCAAACGTCTTAGCTACCGGCTACGGAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCACTCTGAAATTAGTTGAATCGGTGATGGAGCCGTGTGGGACGGTAATTGGCATGCCGGTGGCAGCTGTGAAATTACATGGATCGAGATGA

Protein sequence

MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYHFGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR*

Homology

[Close]

BLAST of CSPI05G05790 vs. ExPASy TrEMBL
Match: A0A0A0KKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155490 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFL LSTVPDDGGFLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVPDDGGFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR
Sbjct: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 164

[Close]

BLAST of CSPI05G05790 vs. ExPASy TrEMBL
Match: A0A5A7THM0 (BON1-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002930 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.3e-79
Identity = 155/172 (90.12%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSL+RPFRPFL LST+  DG FLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLNRPFRPFLTLSTLA-DGDFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLF IPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSV RLSYR
Sbjct: 61  FGDLFHIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVTRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVES--------VMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVES        VMEPCGTVIGMPVAAVKL GSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESLQAVVDSQVMEPCGTVIGMPVAAVKLRGSR 171

[Close]

BLAST of CSPI05G05790 vs. ExPASy TrEMBL
Match: A0A5D2LQN7 (C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G187700v1 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 12  FVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP-------------------DDGGF 71
           F +E+TV+SA GLKN+SS    HR  RPF+ ++T P                   D GG 
Sbjct: 9   FTLEMTVVSAQGLKNTSSFIFTHR-LRPFITITTFPPPLEAADLKSCRGFQTRVDDQGGV 68

Query: 72  LPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 131
            P+     +GD F +P+   FF NR   I+L+LF+KRL+ G A +GWC++PA DI   PV
Sbjct: 69  NPT-----WGDKFHVPIHHTFFANRYSCIYLQLFTKRLISGKAQLGWCQIPAADIGLPPV 128

Query: 132 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKL 161
           GSV++LSYRLR+ DG+R+  +VN+ +KL     + C TVIG+PV  + L
Sbjct: 129 GSVRQLSYRLREADGTRTHGVVNVAVKLEVHSNDRCRTVIGIPVRVMPL 171

[Close]

BLAST of CSPI05G05790 vs. ExPASy TrEMBL
Match: A0A1U8LN80 (BON1-associated protein 2-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107929201 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 12  FVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP-------------------DDGGF 71
           F +E+TV+SA GLKN+SS    HR  RPF+ ++T P                   D GG 
Sbjct: 9   FTLEMTVVSAQGLKNTSSFIFTHR-LRPFITITTFPPPLEAADLKSCRGFQTRVDDQGGV 68

Query: 72  LPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 131
            P+     +GD F +P+   FF NR   I+L+LF+KRL+ G A +GWC++PA DI   PV
Sbjct: 69  NPT-----WGDKFHVPIHHTFFANRYSCIYLQLFTKRLISGKAQLGWCQIPAADIGLPPV 128

Query: 132 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKL 161
           GSV++LSYRLR+ DG+R+  +VN+ +KL     + C TVIG+PV  + L
Sbjct: 129 GSVRQLSYRLREADGTRTHGVVNVAVKLEVHSNDRCRTVIGVPVRVMPL 171

[Close]

BLAST of CSPI05G05790 vs. ExPASy TrEMBL
Match: A0A7J8R7K5 (C2 domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_021612 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 12  FVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP-------------------DDGGF 71
           F +E+TV+SA GLKN+SS    HR  RPF+ ++T P                   D GG 
Sbjct: 9   FTLEMTVVSAQGLKNTSSFLFTHR-LRPFITITTFPPPLEAADLKSCRGFQTRVDDQGGV 68

Query: 72  LPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 131
            P+     +GD F +P+   FF NR   I+L+LF+KRL+ G A +GWC++PA DI   PV
Sbjct: 69  NPT-----WGDKFHVPIHHTFFANRYSCIYLQLFTKRLISGKAQLGWCQIPAADIGLPPV 128

Query: 132 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKL 161
           GSV++LSYRLR+ DG+R+  +VN+ +KL     + C TVIG+PV  + L
Sbjct: 129 GSVRQLSYRLREADGTRTHGVVNVAVKLEVHSNDRCRTVIGVPVRVMPL 171

[Close]

BLAST of CSPI05G05790 vs. NCBI nr
Match: KGN50138.1 (hypothetical protein Csa_000552 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 3.4e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFL LSTVPDDGGFLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVPDDGGFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR
Sbjct: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKLHGSR 164

[Close]

BLAST of CSPI05G05790 vs. NCBI nr
Match: KAA0042790.1 (BON1-associated protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 155/172 (90.12%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVPDDGGFLPSNPIYH 60
           MSYPKLILPPPFVVEITVISADGLKNSSSIFSL+RPFRPFL LST+  DG FLPSNPIYH
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLNRPFRPFLTLSTLA-DGDFLPSNPIYH 60

Query: 61  FGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVKRLSYR 120
           FGDLF IPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSV RLSYR
Sbjct: 61  FGDLFHIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPVGSVTRLSYR 120

Query: 121 LRKRDGSRSRVIVNLTLKLVES--------VMEPCGTVIGMPVAAVKLHGSR 165
           LRKRDGSRSRVIVNLTLKLVES        VMEPCGTVIGMPVAAVKL GSR
Sbjct: 121 LRKRDGSRSRVIVNLTLKLVESLQAVVDSQVMEPCGTVIGMPVAAVKLRGSR 171

[Close]

BLAST of CSPI05G05790 vs. NCBI nr
Match: MBA0552864.1 (hypothetical protein [Gossypium lobatum])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-26
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 12  FVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP-------------------DDGGF 71
           F +E+TV+SA GLKN+SS    HR  RPF+ ++T P                   D GG 
Sbjct: 9   FTLEMTVVSAQGLKNTSSFLFTHR-LRPFITITTFPPPLEAADLKSCGRFQTRVDDQGGV 68

Query: 72  LPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 131
            P+     +GD F +P+   FF NR   I+L+LF+KRL+ G A +GWC++PA DI   PV
Sbjct: 69  NPT-----WGDKFHVPIHHTFFANRYSCIYLQLFTKRLISGKAQLGWCQIPAADIGLPPV 128

Query: 132 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVESVMEPCGTVIGMPVAAVKL 161
           GSV++LSYRLR+ DG+R+  +VN+ +KL     + C TVIG+PV  + L
Sbjct: 129 GSVRQLSYRLREADGTRTHGVVNVAVKLEVHSNDRCRTVIGVPVRVMPL 171

[Close]

BLAST of CSPI05G05790 vs. NCBI nr
Match: KAF3448509.1 (hypothetical protein FNV43_RR09222 [Rhamnella rubrinervis])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-26
Identity = 77/185 (41.62%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 10  PPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP---------------------- 69
           P F +EITVISA GLK+SSSI   HR  RPF+ L+TVP                      
Sbjct: 11  PNFTMEITVISAQGLKSSSSILFSHR-LRPFITLTTVPPSCPNPFRLTRNGDKGCHLYTT 70

Query: 70  ---DDGGFLPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPA 129
              D+GG  P+     +GD F +P+D  FF NR   ++L+L++KRL+ G   +GWC++PA
Sbjct: 71  KVDDEGGINPT-----WGDKFHVPVDSAFFTNRYSCLYLQLYTKRLVLGQTQLGWCQIPA 130

Query: 130 DDISQLPVGSVKRLSYRLRKRDGSRSRVIVNLTLKL-------------VESVMEPCGTV 156
            DI   P G+V+ LSYRLR RDGSR++ I+NL ++L             +   +E C TV
Sbjct: 131 QDIGFPPAGAVRYLSYRLRARDGSRTQGILNLAVRLEGQDDRQGAITNSISPTLETCQTV 189

[Close]

BLAST of CSPI05G05790 vs. NCBI nr
Match: XP_042951013.1 (uncharacterized protein LOC122282978 [Carya illinoinensis] >XP_042951014.1 uncharacterized protein LOC122282978 [Carya illinoinensis] >KAG6636847.1 hypothetical protein CIPAW_11G139400 [Carya illinoinensis] >KAG6636848.1 hypothetical protein CIPAW_11G139400 [Carya illinoinensis] >KAG6688708.1 hypothetical protein I3842_11G137800 [Carya illinoinensis] >KAG7956680.1 hypothetical protein I3843_11G135500 [Carya illinoinensis])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-26
Identity = 77/183 (42.08%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 9   PPPFVVEITVISADGLKNSSSIFSLHRPFRPFLILSTVP--------------------- 68
           PPPF++EITV+SA+GL+ +SS     R  RPF+  +TVP                     
Sbjct: 6   PPPFILEITVLSAEGLETTSSSTLFSRRIRPFITFTTVPPSPFSPNKSNNKKCHVYKTRV 65

Query: 69  -DDGGFLPSNPIYHFGDLFRIPLDVGFFPNR-CFIFLRLFSKRLLFGPALIGWCRMPADD 128
            D GG  P+     +GD FR+PLD  FF NR   I+L LF+KRL+ G   +GW  +P  D
Sbjct: 66  DDKGGINPT-----WGDKFRVPLDTAFFANRFSAIYLHLFTKRLVVGQVQLGWFHIPVYD 125

Query: 129 ISQLPVGSVKRLSYRLRKRDGSRSRVIVNLTLKLV--------------ESVMEPCGTVI 155
           +   PVGSV+ LSYRLR RDGSR R IVNL++KL                 +++ C TVI
Sbjct: 126 MGSPPVGSVRYLSYRLRARDGSRCRGIVNLSIKLETLASVAGQRVPGWGSPMVDMCRTVI 183

The following BLAST results are available for this feature:

BLAST of CSPI05G05790 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G05790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKM2	1.6e-88	99.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155490 PE=4 SV=1	[more]
A0A5A7THM0	5.3e-79	90.12	BON1-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D2LQN7	1.0e-26	43.20	C2 domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G18770...	[more]
A0A1U8LN80	1.0e-26	43.20	BON1-associated protein 2-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC10...	[more]
A0A7J8R7K5	1.0e-26	43.20	C2 domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_021612 PE...	[more]

BLAST of CSPI05G05790 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50138.1	3.4e-88	99.39	hypothetical protein Csa_000552 [Cucumis sativus]	[more]
KAA0042790.1	1.1e-78	90.12	BON1-associated protein 2-like [Cucumis melo var. makuwa]	[more]
MBA0552864.1	2.2e-26	43.20	hypothetical protein [Gossypium lobatum]	[more]
KAF3448509.1	2.2e-26	41.62	hypothetical protein FNV43_RR09222 [Rhamnella rubrinervis]	[more]
XP_042951013.1	2.2e-26	42.08	uncharacterized protein LOC122282978 [Carya illinoinensis] >XP_042951014.1 uncha...	[more]

BLAST of CSPI05G05790 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32246	INGRESSION PROTEIN FIC1	coord: 11..159
None	No IPR available	PANTHER	PTHR32246:SF66	BON1-ASSOCIATED PROTEIN 2	coord: 11..159
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 9..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G05790.1	CSPI05G05790.1	mRNA