CSPI05G05730 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G05730
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 5239870 .. 5240112 (-)
RNA-Seq ExpressionCSPI05G05730
SyntenyCSPI05G05730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTCATCGTCTCAACCTCCATCTTTCTGTCTTCATCATCGGACTTCTTATCGTTGTTGGTCACGTCTCAGCAGTCACTACATCTGATCAGAACAAGAGCATTTTTTATCGTCGTTTTGGAGGAATGATGTTTAACAAGAAAGTGAGCGGTGGCGACGGCGGTGGCCACAACGATGCCAACGTTTTTGGAGGTTCTCTACACCTTGTTCCGAATAGTCCAAACCCTCTTCATAATTGA

mRNA sequence

ATGGCCGCTCATCGTCTCAACCTCCATCTTTCTGTCTTCATCATCGGACTTCTTATCGTTGTTGGTCACGTCTCAGCAGTCACTACATCTGATCAGAACAAGAGCATTTTTTATCGTCGTTTTGGAGGAATGATGTTTAACAAGAAAGTGAGCGGTGGCGACGGCGGTGGCCACAACGATGCCAACGTTTTTGGAGGTTCTCTACACCTTGTTCCGAATAGTCCAAACCCTCTTCATAATTGA

Coding sequence (CDS)

ATGGCCGCTCATCGTCTCAACCTCCATCTTTCTGTCTTCATCATCGGACTTCTTATCGTTGTTGGTCACGTCTCAGCAGTCACTACATCTGATCAGAACAAGAGCATTTTTTATCGTCGTTTTGGAGGAATGATGTTTAACAAGAAAGTGAGCGGTGGCGACGGCGGTGGCCACAACGATGCCAACGTTTTTGGAGGTTCTCTACACCTTGTTCCGAATAGTCCAAACCCTCTTCATAATTGA

Protein sequence

MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHNDANVFGGSLHLVPNSPNPLHN*
Homology
[Close]
BLAST of CSPI05G05730 vs. ExPASy TrEMBL
Match: A0A0A0KQY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60

Query: 61 ANVFGGSLHLVPNSPNPLHN 81
          ANVFGGSLHLVPNSPNPLHN
Sbjct: 61 ANVFGGSLHLVPNSPNPLHN 80

[Close]
BLAST of CSPI05G05730 vs. ExPASy TrEMBL
Match: A0A0A0KKB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.7e-26
Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAH LNLHLSVFIIGLLI+VGHVSAVTTSDQNK+ FYRRF  M+FN K  GG  GG+N+
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAVTTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNNN 60

Query: 61 ANVFGGSLHLVPNSPNPLHN 81
          ANVFGGSLHLVPN P+ LH+
Sbjct: 61 ANVFGGSLHLVPNGPDALHH 80

[Close]
BLAST of CSPI05G05730 vs. ExPASy TrEMBL
Match: A0A5A7TN00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002880 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAV-TTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHN 60
          MAAHRLNLHL VFIIGLLIV+ HVSAV TTSDQ+KSIF RRFGG++FNKK  G  GGG  
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVG--GGGSR 72

Query: 61 DANVFGGSLHLVPNSPNPLHN 81
          D +VF  SLHLVP  P+P+H+
Sbjct: 73 DGDVFKDSLHLVPEGPDPIHH 91

[Close]
BLAST of CSPI05G05730 vs. ExPASy TrEMBL
Match: A0A5A7T872 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00020 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-13
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAHRLN HL++ IIGLLI+VGHV+A  TSD NK  FYRRFG M++ +K    + GG++D
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTATITSDHNKINFYRRFGRMIYKEK----NMGGYHD 60

Query: 61 ANVFGGSLHLVPNSPNP 78
            VFGGSL  VP  P P
Sbjct: 61 -GVFGGSLTQVPAEPGP 72

[Close]
BLAST of CSPI05G05730 vs. NCBI nr
Match: KAE8647866.1 (hypothetical protein Csa_000489, partial [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 4.8e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND
Sbjct: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60

Query: 61 ANVFG 66
          ANVFG
Sbjct: 61 ANVFG 65

[Close]
BLAST of CSPI05G05730 vs. NCBI nr
Match: KGN50130.1 (hypothetical protein Csa_000151 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAH LNLHLSVFIIGLLI+VGHVSAVTTSDQNK+ FYRRF  M+FN K  GG  GG+N+
Sbjct: 1  MAAHHLNLHLSVFIIGLLIIVGHVSAVTTSDQNKNFFYRRFEEMIFNMKKVGGGTGGNNN 60

Query: 61 ANVFGGSLHLVPNSPNPLHN 81
          ANVFGGSLHLVPN P+ LH+
Sbjct: 61 ANVFGGSLHLVPNGPDALHH 80

[Close]
BLAST of CSPI05G05730 vs. NCBI nr
Match: KAA0042785.1 (hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20
Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAV-TTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHN 60
          MAAHRLNLHL VFIIGLLIV+ HVSAV TTSDQ+KSIF RRFGG++FNKK  G  GGG  
Sbjct: 13 MAAHRLNLHLFVFIIGLLIVISHVSAVTTTSDQDKSIFNRRFGGIIFNKKKVG--GGGSR 72

Query: 61 DANVFGGSLHLVPNSPNPLHN 81
          D +VF  SLHLVP  P+P+H+
Sbjct: 73 DGDVFKDSLHLVPEGPDPIHH 91

[Close]
BLAST of CSPI05G05730 vs. NCBI nr
Match: KAA0039672.1 (hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 5.1e-13
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAHRLN HL++ IIGLLI+VGHV+A  TSD NK  FYRRFG M++ +K    + GG++D
Sbjct: 1  MAAHRLNFHLAIVIIGLLILVGHVTATITSDHNKINFYRRFGRMIYKEK----NMGGYHD 60

Query: 61 ANVFGGSLHLVPNSPNP 78
            VFGGSL  VP  P P
Sbjct: 61 -GVFGGSLTQVPAEPGP 72

[Close]
BLAST of CSPI05G05730 vs. NCBI nr
Match: XP_023550529.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04
Identity = 39/80 (48.75%), Postives = 46/80 (57.50%), Query Frame = 0 

Query: 1  MAAHRLNLHLSVFIIGLLIVVGHVSAVTTSDQNKSIFYRRFGGMMFNKKVSGGDGGGHND 60
          MAAH       V  IGLL+VV H  AV TSDQ  S+FY RFGG+    K+SG D      
Sbjct: 1  MAAHHF-----VIFIGLLMVVTHAPAV-TSDQ--SLFYPRFGGISTKMKMSGVD------ 60

Query: 61 ANVFGGSLHLVPNSPNPLHN 81
             FG SL +VP  P+P+HN
Sbjct: 61 --FFGRSLPVVPGGPDPIHN 64

The following BLAST results are available for this feature:
BLAST of CSPI05G05730 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G05730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQY02.5e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155420 PE=4 SV=1[more]
A0A0A0KKB39.7e-2677.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155410 PE=4 SV=1[more]
A0A5A7TN001.2e-2071.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T8722.5e-1359.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CSPI05G05730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647866.14.8e-27100.00hypothetical protein Csa_000489, partial [Cucumis sativus][more]
KGN50130.12.0e-2577.50hypothetical protein Csa_000151 [Cucumis sativus][more]
KAA0042785.12.5e-2071.60hypothetical protein E6C27_scaffold44G002880 [Cucumis melo var. makuwa][more]
KAA0039672.15.1e-1359.74hypothetical protein E6C27_scaffold558G00020 [Cucumis melo var. makuwa][more]
XP_023550529.11.1e-0448.75vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo][more]
BLAST of CSPI05G05730 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G05730.1CSPI05G05730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane