CSPI05G04940 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G04940
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	late embryogenesis abundant protein At1g64065
Location	Chr5: 4699923 .. 4700587 (-)
RNA-Seq Expression	CSPI05G04940
Synteny	CSPI05G04940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCGACAAAATTCCCGGCGAACGTACGGCGGCACACCGATCAAGACGCAAATCAATTAAAAAATGCCTAAACACCTTCTGCATTTGCCTCTTTGGCGCCGCTGCCACCGCTTGCATCGCTGCTCTGACCTTTGGCCTCGTCGTTCTCCGGGTAAAAACCCCAACAGTGAAATTAACCTCCGTCGCGGTAAAACATCTCCACTACGGCTTCTCGCCGACGCCATTCATGGAGGCGACATTAACTGGGGAAATGACAATGGAGAATCCGAATTACGGGGCGTTTGAGTACGAGGGAGTAGGGAACGTGACGTTGATTTACTATGGAGTGGTGGTGGGAATCGGGGAGGTGAAAAGATTGAGTGTAAATGCGAGGAGTATTGAGAAAAGGGAGTTTAATGTAAAAGTGAAACCGAATTGGAGGTTTGTTAATGTGGATTATTTCAGCGATGATTTGGGTAGGTTGAAGACGATGAATATGAGTTGGAACGCAGAGTTCGAGGGAAAGATTGATTTATTGAAATTGTTTAAAGAGAAGAAGATTTCAGTGTTGAAATGTAGTACGAGCCTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTATAGACCAATTACCGGATCTTCTTTTTCTTTTCCATCAACATTTTCGGTTTTCT

mRNA sequence

ATGGCGGCCGACAAAATTCCCGGCGAACGTACGGCGGCACACCGATCAAGACGCAAATCAATTAAAAAATGCCTAAACACCTTCTGCATTTGCCTCTTTGGCGCCGCTGCCACCGCTTGCATCGCTGCTCTGACCTTTGGCCTCGTCGTTCTCCGGGTAAAAACCCCAACAGTGAAATTAACCTCCGTCGCGGTAAAACATCTCCACTACGGCTTCTCGCCGACGCCATTCATGGAGGCGACATTAACTGGGGAAATGACAATGGAGAATCCGAATTACGGGGCGTTTGAGTACGAGGGAGTAGGGAACGTGACGTTGATTTACTATGGAGTGGTGGTGGGAATCGGGGAGGTGAAAAGATTGAGTGTAAATGCGAGGAGTATTGAGAAAAGGGAGTTTAATGTAAAAGTGAAACCGAATTGGAGGTTTGTTAATGTGGATTATTTCAGCGATGATTTGGGTAGGTTGAAGACGATGAATATGAGTTGGAACGCAGAGTTCGAGGGAAAGATTGATTTATTGAAATTGTTTAAAGAGAAGAAGATTTCAGTGTTGAAATGTAGTACGAGCCTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTATAGACCAATTACCGGATCTTCTTTTTCTTTTCCATCAACATTTTCGGTTTTCT

Coding sequence (CDS)

ATGGCGGCCGACAAAATTCCCGGCGAACGTACGGCGGCACACCGATCAAGACGCAAATCAATTAAAAAATGCCTAAACACCTTCTGCATTTGCCTCTTTGGCGCCGCTGCCACCGCTTGCATCGCTGCTCTGACCTTTGGCCTCGTCGTTCTCCGGGTAAAAACCCCAACAGTGAAATTAACCTCCGTCGCGGTAAAACATCTCCACTACGGCTTCTCGCCGACGCCATTCATGGAGGCGACATTAACTGGGGAAATGACAATGGAGAATCCGAATTACGGGGCGTTTGAGTACGAGGGAGTAGGGAACGTGACGTTGATTTACTATGGAGTGGTGGTGGGAATCGGGGAGGTGAAAAGATTGAGTGTAAATGCGAGGAGTATTGAGAAAAGGGAGTTTAATGTAAAAGTGAAACCGAATTGGAGGTTTGTTAATGTGGATTATTTCAGCGATGATTTGGGTAGGTTGAAGACGATGAATATGAGTTGGAACGCAGAGTTCGAGGGAAAGATTGATTTATTGAAATTGTTTAAAGAGAAGAAGATTTCAGTGTTGAAATGTAGTACGAGCCTGAATTTGACCTCCCATGGCGTCCAAAATATTGCTTGCCTATAG

Protein sequence

MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKLTSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKRLSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEKKISVLKCSTSLNLTSHGVQNIACL*

Homology

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BLAST of CSPI05G04940 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 49/163 (30.06%), Postives = 85/163 (52.15%), Query Frame = 0


Query: 44  LTFGLVVLRVKTPTVKLTSVAVKHLHYGFSPT-PFMEATLTGEMTMENPNYGAFEYEGVG 103
           L    + LR+  P ++  S++ + L  G + T P+  ATL  ++++ N N+GAFE+E   
Sbjct: 55  LILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFED-S 114

Query: 104 NVTLIY--YGVVVGIGEVKRLSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMN 163
            + ++Y  +G VVG  +++   V A    +    V    ++R ++      DL RL  + 
Sbjct: 115 TLRVVYADHG-VVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL-RLGFLE 174

Query: 164 MSWNAEFEGKIDLLKLFKEKKISVLKCSTSLNLTSHGVQNIAC 204
           +   AE  G+I +L   K  K+SV+ C+  LNLT   +QN+ C
Sbjct: 175 LRSVAEVRGRIKVLGR-KRWKVSVMSCTMRLNLTGRFIQNLLC 213

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BLAST of CSPI05G04940 vs. ExPASy TrEMBL
Match: A0A0A0KK54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152150 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVKHL YGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR
Sbjct: 61  TSVAVKHLQYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK
Sbjct: 121 LSVNAKSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISVLKCSTSLNLTSHGVQN+ACL
Sbjct: 181 KISVLKCSTSLNLTSHGVQNLACL 204

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BLAST of CSPI05G04940 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 188/204 (92.16%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPG+R  AHRSRRKS KKCLN FCICLF AAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVK+LHYGFSPTPFMEATLTGE+TMENPNYGAFEYEGV NVTLIYYGVVVGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKR+F VKVKPNWRFVNVDYFSDDL RLKTMNMSWNAEFEGKI LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISV+KCSTSLNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

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BLAST of CSPI05G04940 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 188/204 (92.16%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPG+R  AHRSRRKS KKCLN FCICLF AAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVK+LHYGFSPTPFMEATLTGE+TMENPNYGAFEYEGV NVTLIYYGVVVGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKR+F VKVKPNWRFVNVDYFSDDL RLKTMNMSWNAEFEGKI LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISV+KCSTSLNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

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BLAST of CSPI05G04940 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.4e-73
Identity = 145/203 (71.43%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAA + P +R A  RSRRK+ +KC+NTFCI LF  AA ACIAAL  GLVV+RVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSV VK+LHYGFSPTPFM+ATL  E+TMENPN+G F+YE V N TLIYYGV VGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           +SVNA+S +K  F VKVKPN  FV+VDYFS DL  LKTMNMS  AEF+G++ LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIAC 204
           K+S+LKC+ SLNL SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of CSPI05G04940 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 144/203 (70.94%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAA + P +R A  RSRRK+ +KC+NTFCI LF  AA ACIAAL  GLVV+RVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSV VK+LHYGFSPTPFM+ATL  E+TMENPN+G F+YE V N TLIYYGV VGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           +SVNA+S +   F VKVKPN  FV+VDYFS DL  LKTMNMS  AEF+G++ LLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIAC 204
           K+S+LKC+ SLNL+SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of CSPI05G04940 vs. NCBI nr
Match: KAE8647845.1 (hypothetical protein Csa_000600 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 4.8e-108
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 211 MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 270

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVKHL YGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR
Sbjct: 271 TSVAVKHLQYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 330

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK
Sbjct: 331 LSVNAKSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 390

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISVLKCSTSLNLTSHGVQN+ACL
Sbjct: 391 KISVLKCSTSLNLTSHGVQNLACL 414

[Close]

BLAST of CSPI05G04940 vs. NCBI nr
Match: XP_031741228.1 (uncharacterized protein LOC101212153 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 4.8e-108
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVKHL YGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR
Sbjct: 61  TSVAVKHLQYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK
Sbjct: 121 LSVNAKSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISVLKCSTSLNLTSHGVQN+ACL
Sbjct: 181 KISVLKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CSPI05G04940 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 8.2e-100
Identity = 188/204 (92.16%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAADKIPG+R  AHRSRRKS KKCLN FCICLF AAATACIAALTFGLVVLRVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSVAVK+LHYGFSPTPFMEATLTGE+TMENPNYGAFEYEGV NVTLIYYGVVVGIGEVKR
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           LSVNA+SIEKR+F VKVKPNWRFVNVDYFSDDL RLKTMNMSWNAEFEGKI LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIACL 205
           KISV+KCSTSLNLTSHGVQN+ACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of CSPI05G04940 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.3 bits (726), Expect = 8.5e-73
Identity = 145/203 (71.43%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAA + P +R A  RSRRK+ +KC+NTFCI LF  AA ACIAAL  GLVV+RVKTPTVKL
Sbjct: 1   MAAGQPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSV VK+LHYGFSPTPFM+ATL  E+TMENPN+G F+YE V N TLIYYGV VGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           +SVNA+S +K  F VKVKPN  FV+VDYFS DL  LKTMNMS  AEF+G++ LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIAC 204
           K+S+LKC+ SLNL+SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of CSPI05G04940 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-72
Identity = 145/203 (71.43%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MAADKIPGERTAAHRSRRKSIKKCLNTFCICLFGAAATACIAALTFGLVVLRVKTPTVKL 60
           MAA + P +R A  RSRRK+ +KC+NTFCI LF  AA ACIAAL  GLVV+RVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKHLHYGFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKR 120
           TSV VK+LHYGFSPTPFM+ATL  E+TMENPN+G F+YE V N TLIYYGV VGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 LSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEGKIDLLKLFKEK 180
           +SVNA+S +K  F VKVKPN  FV+VDYFS DL  LKTMNMS  AEF+G++ LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KISVLKCSTSLNLTSHGVQNIAC 204
           K+S+LKC+ SLNL SHGVQN+AC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of CSPI05G04940 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 64.7 bits (156), Expect = 9.9e-11
Identity = 49/163 (30.06%), Postives = 85/163 (52.15%), Query Frame = 0


Query: 44  LTFGLVVLRVKTPTVKLTSVAVKHLHYGFSPT-PFMEATLTGEMTMENPNYGAFEYEGVG 103
           L    + LR+  P ++  S++ + L  G + T P+  ATL  ++++ N N+GAFE+E   
Sbjct: 55  LILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFED-S 114

Query: 104 NVTLIY--YGVVVGIGEVKRLSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMN 163
            + ++Y  +G VVG  +++   V A    +    V    ++R ++      DL RL  + 
Sbjct: 115 TLRVVYADHG-VVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL-RLGFLE 174

Query: 164 MSWNAEFEGKIDLLKLFKEKKISVLKCSTSLNLTSHGVQNIAC 204
           +   AE  G+I +L   K  K+SV+ C+  LNLT   +QN+ C
Sbjct: 175 LRSVAEVRGRIKVLGR-KRWKVSVMSCTMRLNLTGRFIQNLLC 213

[Close]

BLAST of CSPI05G04940 vs. TAIR 10
Match: AT2G44000.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-06
Identity = 43/154 (27.92%), Postives = 71/154 (46.10%), Query Frame = 0


Query: 54  KTPTVKLTSVAVKHLHY----GFSPTPFMEATLTGEMTMENPNYGAFEYEGVGNVTLIYY 113
           K  T  LTSV V++L Y      S + +  ATL  E+ +ENPN G FE+       ++Y 
Sbjct: 59  KPLTASLTSVEVRNLRYNNNTSSSSSLYFNATLAMEIRIENPNLGFFEFP-TSRGEILYN 118

Query: 114 GVVVGIGEVKRLSVNARSIEKREFNVKVKPNWRFVNVDYFSDDLGRLKTMNMSWNAEFEG 173
           G VVG   +    V +    + E + +V       +  +  +D+ R + + +   A+  G
Sbjct: 119 GDVVGEMRINGQRVASFGDLRTEVSAEVAYRGNQKSPVWLKNDIER-RLIILETRAKLRG 178

Query: 174 KIDLLKLFKEKKISVLKCSTSLNLTSHGVQNIAC 204
           ++ L  L   K+   LKC   LNL+   +  + C
Sbjct: 179 EVHLKDL--NKRTVNLKCLMQLNLSDDVIHRLWC 208

[Close]

BLAST of CSPI05G04940 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 42.4 bits (98), Expect = 5.3e-04
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 32  LFGAAATACIAALTFGLVVLRVKTPTVKLTSVAVKHLHYGFSPTPF---MEATLTGEMTM 91
           LF    TA I A  F     + K P ++  S  V  +    S  P+   +  TLT EM +
Sbjct: 17  LFVIFMTALILAQVF-----KPKHPILQTVSSTVDGISTNIS-LPYEVQLNFTLTLEMLL 76

Query: 92  ENPNYGAFEYEGVGNVTLIYYGVVVGIGEVKRLSVNARSIEKREFNVKVKPNWRFVNVDY 151
           +NPN   FEY+ V N  L+YY   +    V  L++ + ++  +     + P   F+ +D 
Sbjct: 77  KNPNVADFEYKTVEN--LVYYRDTL----VGNLTLPSSTLPAK--GSVLLPCPLFLQLDK 136

Query: 152 FSDDLGRL------KTMNMSWNAEFEGKIDLLKLFKEKKISVLKCSTSLNLTSHGVQNIA 204
           F  +LG +        + M   A+  GKI LL +FK    S+  C+  L   S  V++  
Sbjct: 137 FVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQV 183

The following BLAST results are available for this feature:

BLAST of CSPI05G04940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.4e-09	30.06	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CSPI05G04940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK54	2.3e-108	98.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152150 PE=4 SV=1	[more]
A0A5A7TMT1	4.0e-100	92.16	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	4.0e-100	92.16	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1EM85	5.4e-73	71.43	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I1W2	1.6e-72	70.94	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CSPI05G04940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647845.1	4.8e-108	98.53	hypothetical protein Csa_000600 [Cucumis sativus]	[more]
XP_031741228.1	4.8e-108	98.53	uncharacterized protein LOC101212153 [Cucumis sativus]	[more]
XP_008437351.1	8.2e-100	92.16	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]
XP_023550526.1	8.5e-73	71.43	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022929131.1	1.1e-72	71.43	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]

BLAST of CSPI05G04940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	9.9e-11	30.06	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G44000.1	1.9e-06	27.92	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G05975.1	5.3e-04	28.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 18..203
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 18..203
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 42..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G04940.1	CSPI05G04940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane