CSPI04G27530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G27530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr4: 24154970 .. 24155691 (+)
RNA-Seq Expression	CSPI04G27530
Synteny	CSPI04G27530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACAGTGAGAACCAGGGAAATACCATATTTCCAATACGGACGGTGACATTAAGAACAACGGCTGGGGAAGTTAAGAAAGAAGGCCCGACGAAGAGACTACCCGATGCAGAATTTCAAGCCCGAAAAGAGAAGGGACTTTGCTTTCGCTGTAATGAAAAGTACTTTCATGGACACCGATGTAAAGGAAGGGAGCAAAGGGAACTAAGAATGTATGTGGTGAAGGAGGATGAGGAATATGAAATTGTGGAGGAAGCGGAATGGGATGAGACAGAATTGAACTGTGTCGAGATAAATCCAGAAGATCAGGCTATCGTTGAACTTTCCATAAATTCAGTGGTTGGGCTGACGAATCCCGGAACGATGAAGGTGAGAGGAAAGATTAAGGATAGAGAAGTAATTATCCTAATAGATTGTGGAGCAACCCATAACTTCATCTCGGACAAGGTGGTGCAGGAACTGAGTTTACCGACGAAGACTACCTCACACTATGGAGTGATTTTGGGCTCGGGTGCAGCTGTGAAGGGGAAAGGAATTTGTGAAGGCATCGAGCTAGAACTGGAGGGATGGAAAGTGGAAGCAAACTTCTTACCACTTGAGTTGGGAGGAGTAGATGGAGTACTAGGAATGCAGTGGTTGTATTCATTGGGCGTGACGGAAGTGGATTGGTAAAACTTGACCATGACTTTTCTACACAACGGAAAGAAAGTGAAAATCAA

mRNA sequence

ATGAATAACAGTGAGAACCAGGGAAATACCATATTTCCAATACGGACGGTGACATTAAGAACAACGGCTGGGGAAGTTAAGAAAGAAGGCCCGACGAAGAGACTACCCGATGCAGAATTTCAAGCCCGAAAAGAGAAGGGACTTTGCTTTCGCTGTAATGAAAAGTACTTTCATGGACACCGATGTAAAGGAAGGGAGCAAAGGGAACTAAGAATGTATGTGGTGAAGGAGGATGAGGAATATGAAATTGTGGAGGAAGCGGAATGGGATGAGACAGAATTGAACTGTGTCGAGATAAATCCAGAAGATCAGGCTATCGTTGAACTTTCCATAAATTCAGTGGTTGGGCTGACGAATCCCGGAACGATGAAGGTGAGAGGAAAGATTAAGGATAGAGAAGTAATTATCCTAATAGATTGTGGAGCAACCCATAACTTCATCTCGGACAAGGTGGTGCAGGAACTGAGTTTACCGACGAAGACTACCTCACACTATGGAGTGATTTTGGGCTCGGGTGCAGCTGTGAAGGGGAAAGGAATTTGTGAAGGCATCGAGCTAGAACTGGAGGGATGGAAAGTGGAAGCAAACTTCTTACCACTTGAGTTGGGAGGAGTAGATGGAGTACTAGGAATGCAGTGGTTGTATTCATTGGGCGTGACGGAAGTGGATTGGTAAAACTTGACCATGACTTTTCTACACAACGGAAAGAAAGTGAAAATCAA

Coding sequence (CDS)

ATGAATAACAGTGAGAACCAGGGAAATACCATATTTCCAATACGGACGGTGACATTAAGAACAACGGCTGGGGAAGTTAAGAAAGAAGGCCCGACGAAGAGACTACCCGATGCAGAATTTCAAGCCCGAAAAGAGAAGGGACTTTGCTTTCGCTGTAATGAAAAGTACTTTCATGGACACCGATGTAAAGGAAGGGAGCAAAGGGAACTAAGAATGTATGTGGTGAAGGAGGATGAGGAATATGAAATTGTGGAGGAAGCGGAATGGGATGAGACAGAATTGAACTGTGTCGAGATAAATCCAGAAGATCAGGCTATCGTTGAACTTTCCATAAATTCAGTGGTTGGGCTGACGAATCCCGGAACGATGAAGGTGAGAGGAAAGATTAAGGATAGAGAAGTAATTATCCTAATAGATTGTGGAGCAACCCATAACTTCATCTCGGACAAGGTGGTGCAGGAACTGAGTTTACCGACGAAGACTACCTCACACTATGGAGTGATTTTGGGCTCGGGTGCAGCTGTGAAGGGGAAAGGAATTTGTGAAGGCATCGAGCTAGAACTGGAGGGATGGAAAGTGGAAGCAAACTTCTTACCACTTGAGTTGGGAGGAGTAGATGGAGTACTAGGAATGCAGTGGTTGTATTCATTGGGCGTGACGGAAGTGGATTGGTAA

Protein sequence

MNNSENQGNTIFPIRTVTLRTTAGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW*

Homology

[Close]

BLAST of CSPI04G27530 vs. ExPASy TrEMBL
Match: A0A5A7TB29 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00190 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.6e-81
Identity = 154/223 (69.06%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+C+
Sbjct: 85  DNKNNTVFPIRTITLRSSVPNETRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCR 144

Query: 65  GREQRELRMYVVKED-EEYEIV-EEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPG 124
            +EQRELRM+VV E  EEYEIV EE E  E E  C+E+N     +VELSINSVVGL +PG
Sbjct: 145 LKEQRELRMFVVTEGREEYEIVEEEKEEKEKEFGCIEVNENLTTVVELSINSVVGLNDPG 204

Query: 125 TMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGIC 184
           TMKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+C
Sbjct: 205 TMKVRGKLLGEEVVILIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVC 264

Query: 185 EGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
           E +E++L+GWK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 265 EKLEVQLKGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 307

[Close]

BLAST of CSPI04G27530 vs. ExPASy TrEMBL
Match: A0A5A7TU09 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001680 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.5e-81
Identity = 154/222 (69.37%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+CK
Sbjct: 312 DNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCK 371

Query: 65  GREQRELRMYVV-KEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            REQRELRM+VV  E +EYEIVEE E + TELNC+E+  +   +VELSINSVVGL +PGT
Sbjct: 372 LREQRELRMFVVTAERDEYEIVEE-ENERTELNCIELKEDVATVVELSINSVVGLNDPGT 431

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSL  K TSHYGVILGSGAAV+GKG+CE
Sbjct: 432 MKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLSIKETSHYGVILGSGAAVQGKGVCE 491

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E+++ GWK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 492 KLEVQMSGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 532

[Close]

BLAST of CSPI04G27530 vs. ExPASy TrEMBL
Match: A0A5A7TET8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002570 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.5e-81
Identity = 155/222 (69.82%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   HRC+
Sbjct: 312 DNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHRCR 371

Query: 65  GREQRELRMYVVKED-EEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            +EQRELRM+VV E  EEYEIVE+ E +E EL C+EIN     +VELSINSVVGL +PGT
Sbjct: 372 MKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVVELSINSVVGLNDPGT 431

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+CE
Sbjct: 432 MKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSGAAVQGKGVCE 491

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E++L+ WK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 492 KMEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 532

[Close]

BLAST of CSPI04G27530 vs. ExPASy TrEMBL
Match: A0A5D3DLL9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002170 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 154/222 (69.37%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+C+
Sbjct: 312 DNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCR 371

Query: 65  GREQRELRMYVVKED-EEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            +EQRELRM+VV E  EEYEIVE+ E +E EL C+EIN     +VELSINSVVGL +PGT
Sbjct: 372 MKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVVELSINSVVGLNDPGT 431

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+CE
Sbjct: 432 MKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSGAAVQGKGVCE 491

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E++L+ WK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 492 KLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 532

[Close]

BLAST of CSPI04G27530 vs. ExPASy TrEMBL
Match: A0A5D3D5P9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00390 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 154/222 (69.37%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+C+
Sbjct: 540 DNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCR 599

Query: 65  GREQRELRMYVVKED-EEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            +EQRELRM+VV E  EEYEIVE+ E +E EL C+EIN     +VELSINSVVGL +PGT
Sbjct: 600 MKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVVELSINSVVGLNDPGT 659

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+CE
Sbjct: 660 MKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSGAAVQGKGVCE 719

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E++L+ WK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 720 KLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 760

[Close]

BLAST of CSPI04G27530 vs. NCBI nr
Match: XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 1.0e-119
Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MNNSENQGNTIFPIRTVTLRTTAGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGH 60
           MN+SE++GNTIFPIRTVTLRT  GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGH
Sbjct: 295 MNHSEDKGNTIFPIRTVTLRTATGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGH 354

Query: 61  RCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNP 120
           RCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNP
Sbjct: 355 RCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNP 414

Query: 121 GTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGI 180
           GTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGS AAVKGKGI
Sbjct: 415 GTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSCAAVKGKGI 474

Query: 181 CEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
           CEGIELELEGWKVEANFLPLELGGVDGVL MQWLYSLGVTEVDW
Sbjct: 475 CEGIELELEGWKVEANFLPLELGGVDGVLEMQWLYSLGVTEVDW 518

[Close]

BLAST of CSPI04G27530 vs. NCBI nr
Match: KAA0040664.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.4 bits (799), Expect = 3.2e-81
Identity = 154/223 (69.06%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+C+
Sbjct: 85  DNKNNTVFPIRTITLRSSVPNETRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCR 144

Query: 65  GREQRELRMYVVKED-EEYEIV-EEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPG 124
            +EQRELRM+VV E  EEYEIV EE E  E E  C+E+N     +VELSINSVVGL +PG
Sbjct: 145 LKEQRELRMFVVTEGREEYEIVEEEKEEKEKEFGCIEVNENLTTVVELSINSVVGLNDPG 204

Query: 125 TMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGIC 184
           TMKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+C
Sbjct: 205 TMKVRGKLLGEEVVILIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVC 264

Query: 185 EGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
           E +E++L+GWK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 265 EKLEVQLKGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 307

[Close]

BLAST of CSPI04G27530 vs. NCBI nr
Match: KAA0039975.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 7.2e-81
Identity = 155/222 (69.82%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   HRC+
Sbjct: 312 DNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHRCR 371

Query: 65  GREQRELRMYVVKED-EEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            +EQRELRM+VV E  EEYEIVE+ E +E EL C+EIN     +VELSINSVVGL +PGT
Sbjct: 372 MKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVVELSINSVVGLNDPGT 431

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+CE
Sbjct: 432 MKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSGAAVQGKGVCE 491

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E++L+ WK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 492 KMEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 532

[Close]

BLAST of CSPI04G27530 vs. NCBI nr
Match: KAA0044875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 7.2e-81
Identity = 154/222 (69.37%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+CK
Sbjct: 312 DNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCK 371

Query: 65  GREQRELRMYVV-KEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            REQRELRM+VV  E +EYEIVEE E + TELNC+E+  +   +VELSINSVVGL +PGT
Sbjct: 372 LREQRELRMFVVTAERDEYEIVEE-ENERTELNCIELKEDVATVVELSINSVVGLNDPGT 431

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSL  K TSHYGVILGSGAAV+GKG+CE
Sbjct: 432 MKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLSIKETSHYGVILGSGAAVQGKGVCE 491

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E+++ GWK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 492 KLEVQMSGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 532

[Close]

BLAST of CSPI04G27530 vs. NCBI nr
Match: TYK18846.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 154/222 (69.37%), Postives = 187/222 (84.23%), Query Frame = 0


Query: 5   ENQGNTIFPIRTVTLRTTA-GEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCK 64
           +N+ NT+FPIRT+TLR++   E ++EG  KRLPDAEFQARKEKGLCFRCNEKY   H+C+
Sbjct: 540 DNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCR 599

Query: 65  GREQRELRMYVVKED-EEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPGT 124
            +EQRELRM+VV E  EEYEIVE+ E +E EL C+EIN     +VELSINSVVGL +PGT
Sbjct: 600 MKEQRELRMFVVTEGREEYEIVED-EKEEKELGCMEINENLTTVVELSINSVVGLNDPGT 659

Query: 125 MKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICE 184
           MKVRGK+   EV+ILIDCGATHNF+S+K+V++LSLP K TSHYGVILGSGAAV+GKG+CE
Sbjct: 660 MKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSGAAVQGKGVCE 719

Query: 185 GIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 225
            +E++L+ WK+  +FLPLELGGVD +LGMQWLYSLGVT VDW
Sbjct: 720 KLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDW 760

[Close]

BLAST of CSPI04G27530 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-16
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 114 VVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGA 173
           V+ LT    M+  G I D +V++ ID GAT NFI  ++   L LPT  T+   V+LG   
Sbjct: 115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174

Query: 174 AVKGKGICEGIELELEGWKVEANFLPLELG--GVDGVLGMQWLYSLGVTEVDW 225
            ++  G C GI L ++  ++  NFL L+L    VD +LG +WL  LG T V+W
Sbjct: 175 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNW 227

[Close]

BLAST of CSPI04G27530 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.4e-12
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 104 QAIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTS 163
           + I ++   S    T    M+  G I   +V+++ID GAT+NFISD++   L LPT TT+
Sbjct: 265 KTIRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTN 324

Query: 164 HYGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLEL--GGVDGVLG 211
              V+LG    ++  G C GI L ++  ++  NFL L+L    VD +LG
Sbjct: 325 QASVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILG 373

The following BLAST results are available for this feature:

BLAST of CSPI04G27530 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G27530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB29	1.6e-81	69.06	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TU09	3.5e-81	69.37	Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TET8	3.5e-81	69.82	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DLL9	5.9e-81	69.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3D5P9	5.9e-81	69.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CSPI04G27530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745972.1	1.0e-119	96.88	uncharacterized protein LOC116406393 [Cucumis sativus]	[more]
KAA0040664.1	3.2e-81	69.06	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0039975.1	7.2e-81	69.82	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0044875.1	7.2e-81	69.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK18846.1	1.2e-80	69.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G27530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29750.1	3.0e-16	39.82	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	4.4e-12	36.70	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 110..224 e-value: 8.3E-19 score: 69.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 120..220
None	No IPR available	PFAM	PF08284	RVP_2	coord: 132..216 e-value: 9.2E-14 score: 51.4
None	No IPR available	PANTHER	PTHR34482:SF28	OS02G0566300 PROTEIN	coord: 23..224
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 23..224
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 125..214 e-value: 1.53827E-20 score: 80.4583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G27530.1	CSPI04G27530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0015074	DNA integration
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0047938	glucose-6-phosphate 1-epimerase activity
molecular_function	GO:0003676	nucleic acid binding