CSPI04G27090 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G27090
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 23933414 .. 23933653 (-)
RNA-Seq ExpressionCSPI04G27090
SyntenyCSPI04G27090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTCAATTTAGAGTGGGCTTATGGAGGGGGTGAAGCCCACATGGGGATGAGGCGAAAAGGGATCGCCGAAAAGCGGAAGGGGAAATCTCAAATCACTTTCTATCTTAGCCGCAACCCACAGCATCTAGTTGTCTCCAATGAGGAAATGCCAGGTGTCGAGCCAGAGGATGATGTAGTGTATTTGGGTGCGACCGTCAACGGACCCAAAAGGACAAGAGAGAGGGATGAACGGTGA

mRNA sequence

ATGGGCTTCAATTTAGAGTGGGCTTATGGAGGGGGTGAAGCCCACATGGGGATGAGGCGAAAAGGGATCGCCGAAAAGCGGAAGGGGAAATCTCAAATCACTTTCTATCTTAGCCGCAACCCACAGCATCTAGTTGTCTCCAATGAGGAAATGCCAGGTGTCGAGCCAGAGGATGATGTAGTGTATTTGGGTGCGACCGTCAACGGACCCAAAAGGACAAGAGAGAGGGATGAACGGTGA

Coding sequence (CDS)

ATGGGCTTCAATTTAGAGTGGGCTTATGGAGGGGGTGAAGCCCACATGGGGATGAGGCGAAAAGGGATCGCCGAAAAGCGGAAGGGGAAATCTCAAATCACTTTCTATCTTAGCCGCAACCCACAGCATCTAGTTGTCTCCAATGAGGAAATGCCAGGTGTCGAGCCAGAGGATGATGTAGTGTATTTGGGTGCGACCGTCAACGGACCCAAAAGGACAAGAGAGAGGGATGAACGGTGA

Protein sequence

MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDVVYLGATVNGPKRTRERDER*
Homology
[Close]
BLAST of CSPI04G27090 vs. ExPASy TrEMBL
Match: A0A0A0L0S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664280 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.4e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV 60
          MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV
Sbjct: 1  MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV 60

Query: 61 VYLGATVNGPKRTRERDER 80
          VYLGATVNGPKRTRERDER
Sbjct: 61 VYLGATVNGPKRTRERDER 79

[Close]
BLAST of CSPI04G27090 vs. NCBI nr
Match: KGN55520.1 (hypothetical protein Csa_012963 [Cucumis sativus])

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV 60
          MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV
Sbjct: 1  MGFNLEWAYGGGEAHMGMRRKGIAEKRKGKSQITFYLSRNPQHLVVSNEEMPGVEPEDDV 60

Query: 61 VYLGATVNGPKRTRERDER 80
          VYLGATVNGPKRTRERDER
Sbjct: 61 VYLGATVNGPKRTRERDER 79

The following BLAST results are available for this feature:
BLAST of CSPI04G27090 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G27090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0S48.4e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664280 PE=4 SV=1[more]
BLAST of CSPI04G27090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55520.11.7e-37100.00hypothetical protein Csa_012963 [Cucumis sativus][more]
BLAST of CSPI04G27090 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G27090.1CSPI04G27090.1mRNA