CSPI04G26590 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G26590
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 23652441 .. 23652757 (-)
RNA-Seq ExpressionCSPI04G26590
SyntenyCSPI04G26590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCATCTATATCTCTTGCAAACAAATTTGCAAATGGATTTTTACGCCGTCCGACGAAACATATGTCACCGTTCCAAATCCGTTGTGTGTGCAGCGTTGGGATTCCGTCCCCGTCGTTTCACGTGTTCCGTTTACTCCCTTCCCGTTCATTCCGTGTCAGGTATTTATTATTTTATTTTGTAACCGTAAACTTTAACTTTTATTCATTTTTGTTTTATGATTTGTATTATTTTATTTGTGCAGGAAGGAAGTGCCGCCCGGTGATAAATTTCGTCACGAAACCTACGCTGATCTTCTTGAGATGAAATTTTGA

mRNA sequence

ATGAACTCATCTATATCTCTTGCAAACAAATTTGCAAATGGATTTTTACGCCGTCCGACGAAACATATGTCACCGTTCCAAATCCGTTGTGTGTGCAGCGTTGGGATTCCGTCCCCGTCGTTTCACGTGTTCCGTTTACTCCCTTCCCGTTCATTCCGTGTCAGGAAGGAAGTGCCGCCCGGTGATAAATTTCGTCACGAAACCTACGCTGATCTTCTTGAGATGAAATTTTGA

Coding sequence (CDS)

ATGAACTCATCTATATCTCTTGCAAACAAATTTGCAAATGGATTTTTACGCCGTCCGACGAAACATATGTCACCGTTCCAAATCCGTTGTGTGTGCAGCGTTGGGATTCCGTCCCCGTCGTTTCACGTGTTCCGTTTACTCCCTTCCCGTTCATTCCGTGTCAGGAAGGAAGTGCCGCCCGGTGATAAATTTCGTCACGAAACCTACGCTGATCTTCTTGAGATGAAATTTTGA

Protein sequence

MNSSISLANKFANGFLRRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLEMKF*
Homology
[Close]
BLAST of CSPI04G26590 vs. ExPASy TrEMBL
Match: A0A0A0L176 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652800 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.3e-29
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 15 FLRRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE 74
          F RRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE
Sbjct: 3  FYRRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE 62

Query: 75 MKF 78
          MKF
Sbjct: 63 MKF 65

[Close]
BLAST of CSPI04G26590 vs. NCBI nr
Match: KGN55468.1 (hypothetical protein Csa_012069 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 15 FLRRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE 74
          F RRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE
Sbjct: 3  FYRRPTKHMSPFQIRCVCSVGIPSPSFHVFRLLPSRSFRVRKEVPPGDKFRHETYADLLE 62

Query: 75 MKF 78
          MKF
Sbjct: 63 MKF 65

The following BLAST results are available for this feature:
BLAST of CSPI04G26590 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G26590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1765.3e-2998.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652800 PE=4 SV=1[more]
BLAST of CSPI04G26590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55468.11.1e-2898.41hypothetical protein Csa_012069 [Cucumis sativus][more]
BLAST of CSPI04G26590 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G26590.1CSPI04G26590.1mRNA