CSPI04G26510 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G26510
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 23613537 .. 23613804 (+)
RNA-Seq ExpressionCSPI04G26510
SyntenyCSPI04G26510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGGTTCGCATTCATTTCAGCCGGCGGCTGTCAGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA

mRNA sequence

ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA

Coding sequence (CDS)

ATGGGTCCCGCTGAAGCAGAGCGTCCCATTGTGCGGACCACCCCGCGGATTATTGATCAAGGGGAATTCCCCCTCTTTCGTGGTCCCCAGTTCTCCTTCCTCCACGTGTTCCCTTCCCATTCGCTTATTCCAAGCGTGCTTCCTCCCCGGTCCCCACTTTTGTGGTCCAAACGCCTTCCTCTCGACGCGTGTCGACCCGTCCTTGTCCCGCGAGTGGCGGAGAGAGAACCGACGTAA

Protein sequence

MGPAEAERPIVRTTPRIIDQGEFPLFRGPQFSFLHVFPSHSLIPSVLPPRSPLLWSKRLPLDACRPVLVPRVAEREPT*
Homology
[Close]
BLAST of CSPI04G26510 vs. ExPASy TrEMBL
Match: A0A0A0L0H7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652720 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.5e-26
Identity = 64/78 (82.05%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 1  MGPAEAERPIVRTTPRIIDQGEFPLFRGPQFSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60
          MGPAEAERPIVRTTPR              FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP
Sbjct: 1  MGPAEAERPIVRTTPR--------------FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60

Query: 61 LDACRPVLVPRVAEREPT 79
          LDACRPVLVPRVAEREPT
Sbjct: 61 LDACRPVLVPRVAEREPT 64

[Close]
BLAST of CSPI04G26510 vs. NCBI nr
Match: KGN55460.1 (hypothetical protein Csa_012245 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 64/78 (82.05%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 1  MGPAEAERPIVRTTPRIIDQGEFPLFRGPQFSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60
          MGPAEAERPIVRTTPR              FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP
Sbjct: 1  MGPAEAERPIVRTTPR--------------FSFLHVFPSHSLIPSVLPPRSPLLWSKRLP 60

Query: 61 LDACRPVLVPRVAEREPT 79
          LDACRPVLVPRVAEREPT
Sbjct: 61 LDACRPVLVPRVAEREPT 64

The following BLAST results are available for this feature:
BLAST of CSPI04G26510 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G26510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0H79.5e-2682.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652720 PE=4 SV=1[more]
BLAST of CSPI04G26510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55460.12.0e-2582.05hypothetical protein Csa_012245 [Cucumis sativus][more]
BLAST of CSPI04G26510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G26510.1CSPI04G26510.1mRNA