CSPI04G25780 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATTTCTTTCTAATATCCAAAATCCATTGATTCTTCCATTTATAAAAACCCGTTTCCACTTCCTTCTTCTCCTTCTTCTTCTCGTCTGTGTTTTTTTCCCCTTTCCCTTTTTCTTCTCTCTCTCCTTGTTGTCACTGTTCAAATTCAAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGATGATAAACGCTCTGGATTCTCGCCGGAAGATTTGGGTTATGGATCGGTGTTTCAGAGGTTGGTTACTCATGATGTGGATCGCGTTGTTGAAGGGTTTCAAAAGGAGGAGGAAGCTGATGAGTCTAATACTTGCAGCTCCGCTTCCACTTCGTCGTCTTCTTCGATTGGGAGGAATAGTGATCAGTCCGATGATGAGGATAACGGTGAGAATGATGAGGTTCAGAGCTCATATAAAGGCCCGCTTGATATGATGGATTCCTTGGAGGAGGTTTTGCCTGTCAGGTTGGTTTTCTTTTTCTTTGATAATCTTGTTTCTCTTGTTTTGGATGATATGGGCTACTTGCTTGCGCGATCTTAGTTTGGTAATAAATTTTATGGATGATCTGGATCGAGTTTAGGGGAGATGAAATTGTCGGGGAAGGCTTGATTGAGCCTTGAAATTTAGTACTTTAGTTGTACAATGCAGTTAGAGATTGGGGATTGTTAATCTACCCTGTAGAATGATGGAGTCGTTTGATCTATGCTTTGACTATTGATCAATTAATTTTGTTTCATTCTGGACTTATTACTGGGATTACGTTTATTTTCTGGCGGTGACTAGTATTTAATACTCTTGGAAGAGTCATTAGTCTGGGCATGAATAAGTTTGGCTTGTAGAAACATTCATGAGTTAACTGTATTTTTCGGTGAGTTAATAATGAGAAAAGAGAGCATTTCAAGCTGAAGATTAGCAAATGGCATCGTTTTTTCAATGCACTTTAAGAATTCTTTTGCCATCTTTATTGCAATATGTTTTGTGGATATTGTGTTTCTGAGGTGTTTTTAAGCTTGGTCAGAAAGAAATCATTGCTTTGTTGAGCATTGTCACTGTCAAAATTGTTCTGCGACACTGCAAGACATTGACTACTTTTGATTTTAGCTTTATGATTTCAGCAACACTATCTCTACTTTTGAGATGGAAAAAAGGATCGAGTATCCATTATACAATCAAGTTTTTATACATTTTTGCAGCAGAAAAAACACAAATACACGTATTCTATTTGTTCCTTTATCTAATAAAGAATTATTACTACATGCAGAAAAGGCATCTCAAAGTTTTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCTTCCTCTGTTAACTCCATGAAAGAGATTGCAAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCCTACAATCTTGTGTGGGAGAAGAATAGGAGTTTTCCTCTCAAGAACAACGGTGGTGGTATATCAAAAAGACCGATCAGTTCGAGCAAAAGCTCCTTGGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAAGATTCAAATTGTAGCTCATATTCAAGTTCTCCACCGCCTCGCCCGCCTCTACATCCACAATCCAGACCATCTAACAACAATTTCCCTTCCATGGTGCCACCTCAAAAAACTTTTTCCACTTGGCGTTCATATTCTTTGGCTGATTTACAAGAGTGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGACCCCAGAAAAGTTCCTTCTCTTGCATAGGTACGCAAGAGTCTTTTAACTATATTCTAGGAACCCTGAAATAGGAGGTTTTTTCTAGTATGATTTTAGGTCTTATGGTCTTTACTGTACTCTGTCTTAAAATCCAAAAACTTTCATGTCTCGTTGTTTATAATGAAAATTGGGGATATGAAATTAAGAGGAAAGCTGAGGGTAGCAGATGTGAGTCATATTTGTCAACACCTGTATGTCTGTATTGGCCTAAGACAAGCAACCATCTCAACCACCGACCCATACATAAGCAGCCACCTTGAAGGTTAGTTTGACCAATGAACCACACAACTTCCAAATTCTTTTTGGTTCCCCCACCAAGATTGAAAACCTGGTCGGTAAGGTTGAGTAACTTCCAAGAGGTGTTCTTATGCTCTTATGAAAACATACTTCTGCTTCGAAGCAATGGATAGTGTGACCTTCCACAATCCCATGTAATTGACTTTAGAACTTTAAGTTGATTTGTTAACATTGATTCCCCATATACTGTATGAGACACTCCCAGTAGCATTTAAAAGGCTTATGGGTCCCTGATATTCATGTTTTCCCATGAGAGTTTCATTTATGGTTGGATTTCACTACGGCTTCTTTCTTCTAGATCTTGAGAATGTAAGACATGCACAATGCTGCAATTTGCTCGTTGCTTTAAGCATTTTGTAAGCATCATTCCCAATGACATTGATGAGTTTCTTCTATGTTGGGTACATTGTGATGTGAGAATCTTGATGTTGTAGTAGTCAAATAGTTCTGCTGTTCTTTGAAGAATATATTGCAACAAATTTAATGTCGGTTGACGTGTTTGAACAGTATTAGATAAGATTGGAATTAGTGATGGGACCTCTTTAGTAGTTGCTTGGAGACTAGTCTAGAGATTAACAATTATA AAAAAAATTTCTTTCTAATATCCAAAATCCATTGATTCTTCCATTTATAAAAACCCGTTTCCACTTCCTTCTTCTCCTTCTTCTTCTCGTCTGTGTTTTTTTCCCCTTTCCCTTTTTCTTCTCTCTCTCCTTGTTGTCACTGTTCAAATTCAAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGATGATAAACGCTCTGGATTCTCGCCGGAAGATTTGGGTTATGGATCGGTGTTTCAGAGGTTGGTTACTCATGATGTGGATCGCGTTGTTGAAGGGTTTCAAAAGGAGGAGGAAGCTGATGAGTCTAATACTTGCAGCTCCGCTTCCACTTCGTCGTCTTCTTCGATTGGGAGGAATAGTGATCAGTCCGATGATGAGGATAACGGTGAGAATGATGAGGTTCAGAGCTCATATAAAGGCCCGCTTGATATGATGGATTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGCATCTCAAAGTTTTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCTTCCTCTGTTAACTCCATGAAAGAGATTGCAAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCCTACAATCTTGTGTGGGAGAAGAATAGGAGTTTTCCTCTCAAGAACAACGGTGGTGGTATATCAAAAAGACCGATCAGTTCGAGCAAAAGCTCCTTGGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAAGATTCAAATTGTAGCTCATATTCAAGTTCTCCACCGCCTCGCCCGCCTCTACATCCACAATCCAGACCATCTAACAACAATTTCCCTTCCATGGTGCCACCTCAAAAAACTTTTTCCACTTGGCGTTCATATTCTTTGGCTGATTTACAAGAGTGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGACCCCAGAAAAGTTCCTTCTCTTGCATAGGTACGCAAGAGTCTTTTAACTATATTCTAGGAACCCTGAAATAGGAGGTTTTTTCTAGTATGATTTTAGGTCTTATGGTCTTTACTGTACTCTGTCTTAAAATCCAAAAACTTTCATGTCTCGTTGTTTATAATGAAAATTGGGGATATGAAATTAAGAGGAAAGCTGAGGGTAGCAGATGTGAGTCATATTTGTCAACACCTGTATGTCTGTATTGGCCTAAGACAAGCAACCATCTCAACCACCGACCCATACATAAGCAGCCACCTTGAAGGTTAGTTTGACCAATGAACCACACAACTTCCAAATTCTTTTTGGTTCCCCCACCAAGATTGAAAACCTGGTCGGTAAGGTTGAGTAACTTCCAAGAGGTGTTCTTATGCTCTTATGAAAACATACTTCTGCTTCGAAGCAATGGATAGTGTGACCTTCCACAATCCCATGTAATTGACTTTAGAACTTTAAGTTGATTTGTTAACATTGATTCCCCATATACTGTATGAGACACTCCCAGTAGCATTTAAAAGGCTTATGGGTCCCTGATATTCATGTTTTCCCATGAGAGTTTCATTTATGGTTGGATTTCACTACGGCTTCTTTCTTCTAGATCTTGAGAATGTAAGACATGCACAATGCTGCAATTTGCTCGTTGCTTTAAGCATTTTGTAAGCATCATTCCCAATGACATTGATGAGTTTCTTCTATGTTGGGTACATTGTGATGTGAGAATCTTGATGTTGTAGTAGTCAAATAGTTCTGCTGTTCTTTGAAGAATATATTGCAACAAATTTAATGTCGGTTGACGTGTTTGAACAGTATTAGATAAGATTGGAATTAGTGATGGGACCTCTTTAGTAGTTGCTTGGAGACTAGTCTAGAGATTAACAATTATA ATGTCGATTACTTTGGATAGGGTTCGGCAGGTTGATGATAAACGCTCTGGATTCTCGCCGGAAGATTTGGGTTATGGATCGGTGTTTCAGAGGTTGGTTACTCATGATGTGGATCGCGTTGTTGAAGGGTTTCAAAAGGAGGAGGAAGCTGATGAGTCTAATACTTGCAGCTCCGCTTCCACTTCGTCGTCTTCTTCGATTGGGAGGAATAGTGATCAGTCCGATGATGAGGATAACGGTGAGAATGATGAGGTTCAGAGCTCATATAAAGGCCCGCTTGATATGATGGATTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGCATCTCAAAGTTTTATAGTGGAAAATCAAAGTCTTTCACGAGTCTGGCCGATGCTTCCTCTGTTAACTCCATGAAAGAGATTGCAAAGCCAGAGAATGCCTATTCCAAGAAACGTAGGAATCTTATGGCCTACAATCTTGTGTGGGAGAAGAATAGGAGTTTTCCTCTCAAGAACAACGGTGGTGGTATATCAAAAAGACCGATCAGTTCGAGCAAAAGCTCCTTGGCTTTGGCTGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAAGATTCAAATTGTAGCTCATATTCAAGTTCTCCACCGCCTCGCCCGCCTCTACATCCACAATCCAGACCATCTAACAACAATTTCCCTTCCATGGTGCCACCTCAAAAAACTTTTTCCACTTGGCGTTCATATTCTTTGGCTGATTTACAAGAGTGCGCCACCTTTGCTAATAAGGCCAACCTAACCAATCTGAACTGA MSITLDRVRQVDDKRSGFSPEDLGYGSVFQRLVTHDVDRVVEGFQKEEEADESNTCSSASTSSSSSIGRNSDQSDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGKSKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPISSSKSSLALAVAMSSSESNSSEDSNCSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKTFSTWRSYSLADLQECATFANKANLTNLN* Homology
BLAST of CSPI04G25780 vs. ExPASy TrEMBL
Match: A0A0A0L451 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648530 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 1.9e-134 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0
BLAST of CSPI04G25780 vs. ExPASy TrEMBL
Match: A0A5A7VFR8 (Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001690 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0
BLAST of CSPI04G25780 vs. ExPASy TrEMBL
Match: A0A1S3BU42 (vitellogenin-2 OS=Cucumis melo OX=3656 GN=LOC103493705 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0
BLAST of CSPI04G25780 vs. ExPASy TrEMBL
Match: A0A6J1FCW4 (uncharacterized protein LOC111442964 OS=Cucurbita moschata OX=3662 GN=LOC111442964 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 8.1e-114 Identity = 231/267 (86.52%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of CSPI04G25780 vs. ExPASy TrEMBL
Match: A0A6J1IQH5 (uncharacterized protein LOC111477263 OS=Cucurbita maxima OX=3661 GN=LOC111477263 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.4e-110 Identity = 227/267 (85.02%), Postives = 247/267 (92.51%), Query Frame = 0
BLAST of CSPI04G25780 vs. NCBI nr
Match: XP_004141345.1 (vitellogenin-2 [Cucumis sativus] >KGN55382.1 hypothetical protein Csa_012692 [Cucumis sativus]) HSP 1 Score: 488.4 bits (1256), Expect = 3.8e-134 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0
BLAST of CSPI04G25780 vs. NCBI nr
Match: XP_008452790.1 (PREDICTED: vitellogenin-2 [Cucumis melo] >KAA0064541.1 vitellogenin-2 [Cucumis melo var. makuwa] >TYK20049.1 vitellogenin-2 [Cucumis melo var. makuwa]) HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132 Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0
BLAST of CSPI04G25780 vs. NCBI nr
Match: XP_038896868.1 (uncharacterized protein LOC120085087 [Benincasa hispida]) HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124 Identity = 250/267 (93.63%), Postives = 254/267 (95.13%), Query Frame = 0
BLAST of CSPI04G25780 vs. NCBI nr
Match: XP_022936302.1 (uncharacterized protein LOC111442964 [Cucurbita moschata] >XP_022936303.1 uncharacterized protein LOC111442964 [Cucurbita moschata]) HSP 1 Score: 419.9 bits (1078), Expect = 1.7e-113 Identity = 231/267 (86.52%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of CSPI04G25780 vs. NCBI nr
Match: KAG7024377.1 (Guanine nucleotide-binding protein alpha-2 subunit, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 408.7 bits (1049), Expect = 3.9e-110 Identity = 225/261 (86.21%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CSPI04G25780 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33 Identity = 110/228 (48.25%), Postives = 150/228 (65.79%), Query Frame = 0
BLAST of CSPI04G25780 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 107.1 bits (266), Expect = 2.2e-23 Identity = 72/151 (47.68%), Postives = 101/151 (66.89%), Query Frame = 0
BLAST of CSPI04G25780 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 0
BLAST of CSPI04G25780 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09 Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of CSPI04G25780 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 52.4 bits (124), Expect = 6.6e-07 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|