CSPI04G22710 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G22710
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
LocationChr4: 20987664 .. 20990054 (-)
RNA-Seq ExpressionCSPI04G22710
SyntenyCSPI04G22710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTTACCATGTTGATTTTTGACGTAAGGTTATCCTAATTTAGGGAAGATGAAATATCCCAAATTTAGACCTTTCTACTTTCCTCTTCATAGCTGTGTAACGTCGACCACCTGAACTAAGAACCTAATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATGTAATTTCTTCCATTTTTCTCTTTTTATTTTCTCTCTTCCATTCTATTCATTAACCATTCCATTCGTTTATGTTGTTCAGTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTCCTAATGATGCTGTGCAGAAAGTCGTCGAATGATCTCAGGTTAGTTTGTTATATTCTACTATTTCTCAAGTTAGATCGCTATTGCGATGTTAGGATAATGATTTTGGATTCATAATTGATCATTCTGTGATTATAATTATGGTGTGAGATCTATTGCAACTCTGCTCATTTTCTGTAGCAATAATGGAAGGGGCAAACCCTTATGAGGATGTTGCTTTATCAACTATCACCTATAAGAAGAGAAAAGTGTAGTGATTACACTAGTTGAGTGCTAACATATTGAAAGTGCCATTGATGACTATGAGGGGGAAATCAAAGGAGCCTCTTTGAGATTAGAATTGTAAAGAAAAAGTGAGTGGGCCGTAACCAAAATAGAATGGATAATATTTAGATCTTTGACTTCTGTCTTATGCATTGTGATTTAGGTGTGCTACACGTGTTGTCTTTTGTGATACAAACTTACAGTAGACAACAAGGAGACACCGGTTTATTGAGGAAGAGAGTAAGCTCTTAGACGTACACACTGAGGCTGAATATTTCGTATATTAGGTTAGAGTGGTTATAAGATAGTTGTAAATAAAGACTAAAGACATTAATAATAAACCAAATACAAATCGTTAAAACAGAAAATAACAAGGGCTTAATTGATAATTTAGTCTAGCTAAGATCTTTACAGTATACCATGCATATTGGCACCTTGAATTGTGGGATTCTGGCCCTTGTACAGAATGGTTTGTATAAGGGCAGGGCAGCATGATTGGCATGTTCTTTTATGCAGAGCAAAATGGGCTAGAACTCGTAGTGTGTTTCTCTCCATTCTGTTCTTGATTTCTGCCTGTGCCATACTGAGGATGAGCCGAAGAGGATATTATTTGAAAGAAGAAAAAGAATAGTTGAAGTAATTAACATGAGAATACAATGGAAGTTATTGACTTTCTGGCTGGTAAATAAGGGATTTTGCTTTTGTGTAAGAGATGAGGCAAGTGTTAGACTTCTAGTTCATTCATTTGATGTATACCCCCTGCAATTAAAATACCGCATTGTCTCATAACAAAAGAATGTGTAGTTGACTTTTTTGAGTGGCTATCCTGCCCATTTTTTCTAATAAGTTCCTTCAATTTTAAGATAATGCTTTCCTTTTCCACAAGCCAAGATTTCTAATAAGTGAGGCCTTAAGCATTTTCGTAGACTTTGTTGTGATAGCAACTAAAGTTTGTATAATGAAAGACTAGCCTATCCAAATCACTGTTCTAGAATATTTTATACTTCACCAAAACATCCTTCTAGGCACATCTGCATTAATATGTCCTTTTCAATCCGAAAGGTGTCATAATAATTATTCTTGTAATGAAAGCTTTAATGCTTTTGCACTTGACATGGATGTTTTCTGGTGATGGTCATTATATGGTCGTTTGGTTTATATTTTATTATGATTCATTTTTTAGTGAAGGAATTGTTGTTATACTCTCTGTAAATTTCATCATTAATATAATTTCATTTCTTTAACATAAATGAAAATGAAGGTATTTCAGAACCTACAAAGGACAATTAACGTGATCTTCTCCTGGTTTATGTTTTTAAATTTGTAGACTTAATCCTTAATCCTTAATCCAAGTCCCTTGTTTACATGTCAGGGGTGGCCGCTCAAGGATCTTAAGATGCTTTCAGCTCAACAGTTAAGTCCCTCATTTACCACCAGATTTCTTGTTATAGTTAAGAGTACATGTAGGATTATCTATGTTTTTTTTTAAACAGAAACAAACTTCTTTGTTAATAATAAGAACTCAAAGTACAAGAGAATTATACAATGAGAGGATTATCTATGTCTTTTAGCTATTATGCTGCTGGGTAGATTTTAGCCAATAATACCCAGAAAATGTTGCCTCTGTCAATAGTACTATTTCTTCCTTTCATTCCTTATCCAGCCATCTCTGTCTCTGATCTCTTTTATATGTACAAGTTCATCATGCTCTGAAGGAAACACCATTTTCAACTTGTCCTGCCAAAGC

mRNA sequence

GTTATTTACCATGTTGATTTTTGACGTAAGGTTATCCTAATTTAGGGAAGATGAAATATCCCAAATTTAGACCTTTCTACTTTCCTCTTCATAGCTGTGTAACGTCGACCACCTGAACTAAGAACCTAATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTCCTAATGATGCTGTGCAGAAAGTCGTCGAATGATCTCAGGGGTGGCCGCTCAAGGATCTTAAGATGCTTTCAGCTCAACAGTTAAGTCCCTCATTTACCACCAGATTTCTTGTTATAGTTAAGAGTACATGTAGGATTATCTATGTTTTTTTTTAAACAGAAACAAACTTCTTTGTTAATAATAAGAACTCAAAGTACAAGAGAATTATACAATGAGAGGATTATCTATGTCTTTTAGCTATTATGCTGCTGGGTAGATTTTAGCCAATAATACCCAGAAAATGTTGCCTCTGTCAATAGTACTATTTCTTCCTTTCATTCCTTATCCAGCCATCTCTGTCTCTGATCTCTTTTATATGTACAAGTTCATCATGCTCTGAAGGAAACACCATTTTCAACTTGTCCTGCCAAAGC

Coding sequence (CDS)

ATGACCGGAGAAGAGGTTACTGGTCCGGCGGGCCCTAAGATTCTCCGTCTCCTCTATTTCGCCGGCGCCGGATTCATTGTCAGCTTCGCCATAAACAAGTGGCGGGAGATCGAGCGCAATTCTCTGTTGCAACAACAGCAGAAGCAGCGTTTGAATCATCAATTATCCGAATCTCCTAATGATGCTGTGCAGAAAGTCGTCGAATGA

Protein sequence

MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPNDAVQKVVE*
Homology
[Close]
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match: A0A0A0L208 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-29
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match: A0A090ITT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTG+EVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN
Sbjct: 1  MTGKEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match: A0A5D3DXD1 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00850 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-26
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match: A0A1S3CKG5 (uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-26
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match: A0A6J1C1U1 (uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006563 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          M GEEV+GPAGPK+LR LYFAGAGF+ + A+NKWRE+ER SLLQQ QKQ LNHQ SE+PN
Sbjct: 1  MAGEEVSGPAGPKVLRFLYFAGAGFVFAIAVNKWREMERRSLLQQHQKQMLNHQFSETPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. NCBI nr
Match: XP_011654034.1 (uncharacterized protein LOC105435291 [Cucumis sativus] >XP_031739554.1 uncharacterized protein LOC105435291 [Cucumis sativus] >KGN55049.1 hypothetical protein Csa_012569 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. NCBI nr
Match: CED89884.1 (uncharacterized protein [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 3.7e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTG+EVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN
Sbjct: 1  MTGKEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVVE
Sbjct: 61 DAVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. NCBI nr
Match: XP_008463762.1 (PREDICTED: uncharacterized protein LOC103501828 [Cucumis melo] >KAA0066753.1 transmembrane protein [Cucumis melo var. makuwa] >TYK27900.1 transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 5.9e-26
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEVTGPAGPKILRLLYFAGAGFI SFAINKWREIERNSLLQQ QKQRLNHQLSES N
Sbjct: 1  MTGEEVTGPAGPKILRLLYFAGAGFICSFAINKWREIERNSLLQQHQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D VQKVVE
Sbjct: 61 DTVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. NCBI nr
Match: XP_038897241.1 (uncharacterized protein LOC120085366 [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 5.5e-24
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          M GEEV GPAGPK+LRLLYFAGAGFI + AINKWREIERNSLL+QQQKQRLNHQLSES N
Sbjct: 1  MAGEEVAGPAGPKVLRLLYFAGAGFIFTIAINKWREIERNSLLEQQQKQRLNHQLSESRN 60

Query: 61 DAVQKVVE 69
          D+VQKVVE
Sbjct: 61 DSVQKVVE 68

[Close]
BLAST of CSPI04G22710 vs. NCBI nr
Match: XP_023522224.1 (uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-23
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0 

Query: 1  MTGEEVTGPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPN 60
          MTGEEV GPAGPK+LRLLYFAGAGF+ + A+NKWREIER SLLQQQQKQRL+HQ +ESPN
Sbjct: 1  MTGEEVAGPAGPKVLRLLYFAGAGFVFTIAMNKWREIERKSLLQQQQKQRLDHQFAESPN 60

Query: 61 DAVQKVVE 69
          DAVQKVV+
Sbjct: 61 DAVQKVVK 68

[Close]
BLAST of CSPI04G22710 vs. TAIR 10
Match: AT1G16916.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 5.5e-14
Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 0 

Query: 8  GPAGPKILRLLYFAGAGFIVSFAINKWREIERNSLLQQQQKQRLNHQLSESPNDAVQKVV 67
          GP  PK+LR++YF GAGF+ +FAINKWRE+ERNSLL+Q+Q++     +   P D+VQK +
Sbjct: 5  GPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQGDVGLLPRDSVQKAM 64

Query: 68 E 69
          +
Sbjct: 65 K 65

The following BLAST results are available for this feature:
BLAST of CSPI04G22710 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G22710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2086.1e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625040 PE=4 SV=1[more]
A0A090ITT61.8e-2898.53Uncharacterized protein OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A5D3DXD12.8e-2694.12Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
A0A1S3CKG52.8e-2694.12uncharacterized protein LOC103501828 OS=Cucumis melo OX=3656 GN=LOC103501828 PE=... [more]
A0A6J1C1U12.5e-2277.94uncharacterized protein LOC111006563 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
BLAST of CSPI04G22710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654034.11.3e-28100.00uncharacterized protein LOC105435291 [Cucumis sativus] >XP_031739554.1 uncharact... [more]
CED89884.13.7e-2898.53uncharacterized protein [Cucumis sativus][more]
XP_008463762.15.9e-2694.12PREDICTED: uncharacterized protein LOC103501828 [Cucumis melo] >KAA0066753.1 tra... [more]
XP_038897241.15.5e-2486.76uncharacterized protein LOC120085366 [Benincasa hispida][more]
XP_023522224.12.7e-2382.35uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of CSPI04G22710 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G16916.15.5e-1454.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G22710.1CSPI04G22710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane