CSPI04G20970 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G20970
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 19390652 .. 19390843 (+)
RNA-Seq ExpressionCSPI04G20970
SyntenyCSPI04G20970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

mRNA sequence

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

Coding sequence (CDS)

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

Protein sequence

MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASAQVG*
Homology
[Close]
BLAST of CSPI04G20970 vs. ExPASy TrEMBL
Match: A0A0A0L418 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G571230 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.1e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

[Close]
BLAST of CSPI04G20970 vs. NCBI nr
Match: KGN54876.1 (hypothetical protein Csa_012052 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 8.4e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

The following BLAST results are available for this feature:
BLAST of CSPI04G20970 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G20970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4184.1e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G571230 PE=4 SV=1[more]
BLAST of CSPI04G20970 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54876.18.4e-27100.00hypothetical protein Csa_012052 [Cucumis sativus][more]
BLAST of CSPI04G20970 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G20970.1CSPI04G20970.1mRNA