Homology
BLAST of CSPI04G20560 vs. ExPASy Swiss-Prot
Match:
P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17
Identity = 59/180 (32.78%), Postives = 96/180 (53.33%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEI--SFAKLKR-----AMMT 69
+R FLGLTGYYR+F+ NY +IA P+ LK + + E +F KLK ++
Sbjct: 441 IRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQ 500
Query: 70 LPKFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQG 129
LP F F + DAS +G VL+Q PIS+ SRTL+ + + E+EL+A+V+A +
Sbjct: 501 LPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKT 560
Query: 130 WRPGLLGRR-EIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGRLVISKTSSLLSTI 182
+R LLGR+ I D + + +++ + + + + QFK + K +S+ +
Sbjct: 561 FRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADAL 620
BLAST of CSPI04G20560 vs. ExPASy Swiss-Prot
Match:
P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 4.1e-17
Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAY--KWSAEAEISFAKLK-----RAMMT 69
++ FLGLTGYYR+F+ N+ +IA P+ + LK + E + +F KLK ++
Sbjct: 442 IKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILK 501
Query: 70 LPKFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQG 129
+P F+ F + DAS +G VL+Q P+SY SRTL+ + + E+EL+A+V+A +
Sbjct: 502 VPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKT 561
Query: 130 WRPGLLGRR-EIDRD 137
+R LLGR EI D
Sbjct: 562 FRHYLLGRHFEISSD 576
BLAST of CSPI04G20560 vs. ExPASy Swiss-Prot
Match:
P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 2.7e-16
Identity = 55/179 (30.73%), Postives = 91/179 (50.84%), Query Frame = 0
Query: 9 RVRGFLGLTGYYRRFVQNYGNIAGPLIQLLK----AGAYKWSAEAEISFAKLKR------ 68
+VR FLGL YYR F++++ IA P+ +LK + + S + + F + +R
Sbjct: 416 KVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRL 475
Query: 69 --------AMMTLPKFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYE 128
++ P F PF++ DAS G+G VL+Q +PI+ SRTL +++ E
Sbjct: 476 RNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNE 535
Query: 129 RELIAVVFAVQGWRPGLLGRREI----DRDP------------KLKEFKSTVEKHQSDI 154
REL+A+V+A+ + L G REI D P K+K +KS +++H + +
Sbjct: 536 RELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKV 594
BLAST of CSPI04G20560 vs. ExPASy Swiss-Prot
Match:
Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 7.2e-14
Identity = 53/182 (29.12%), Postives = 92/182 (50.55%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAY---KWSAEAEI----------SFAKL 69
++ FLG+T YYR+F+Q+Y +A PL L + G Y K S +++ SF L
Sbjct: 358 LKRFLGMTSYYRKFIQDYAKVAKPLTNLTR-GLYANIKSSQSSKVPITLDETALQSFNDL 417
Query: 70 KRAM-----MTLPKFSLPFEIEMDASGYGVGVVLTQ----AKKPISYFSRTLSMRDRSRP 129
K + + P F+ PF + DAS + +G VL+Q +PI+Y SR+L+ + +
Sbjct: 418 KSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYA 477
Query: 130 VYERELIAVVFAVQGWRPGLLGRREI----DRDP------------KLKEFKSTVEKHQS 154
E+E++A+++++ R L G I D P KLK +K+ +E++
Sbjct: 478 TIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNC 537
BLAST of CSPI04G20560 vs. ExPASy Swiss-Prot
Match:
P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 2.1e-13
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 7 TDRVRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTLPKF 66
T +RGFLGLTGYYRRFV+NYG I PL +LLK + KW+ A ++F LK A+ TLP
Sbjct: 63 TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122
Query: 67 SLP 70
+LP
Sbjct: 123 ALP 125
BLAST of CSPI04G20560 vs. ExPASy TrEMBL
Match:
A0A5A7V7S9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001230 PE=4 SV=1)
HSP 1 Score: 365.5 bits (937), Expect = 1.9e-97
Identity = 190/338 (56.21%), Postives = 223/338 (65.98%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PLIQLLKAGAYKW+ E E +F KLK+AMMTL P
Sbjct: 714 MRGFLGLTGYYRRFVQNYGSISAPLIQLLKAGAYKWTEETEAAFEKLKKAMMTLPVLAMP 773
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 774 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 833
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 834 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 893
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
RE+ +DP L+E S +E+ +IP ++ HQG+L+FKGR
Sbjct: 894 IGPTAHLNQLTAPALLDVEVIQREVRKDPALREIISLIEEQGIEIPRYTCHQGILKFKGR 953
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 954 LVLSKTSILIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 1013
BLAST of CSPI04G20560 vs. ExPASy TrEMBL
Match:
A0A5A7TDM4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002330 PE=4 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 2.3e-95
Identity = 186/338 (55.03%), Postives = 224/338 (66.27%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 306 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMP 365
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 366 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 425
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 426 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 485
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 486 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREIISMIEEQGIEIPHYTCHQGILKFKGR 545
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 546 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 605
BLAST of CSPI04G20560 vs. ExPASy TrEMBL
Match:
A0A5D3CW07 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00650 PE=4 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 2.3e-95
Identity = 186/338 (55.03%), Postives = 224/338 (66.27%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 306 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMP 365
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 366 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 425
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 426 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 485
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 486 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREIISMIEEQGIEIPHYTCHQGILKFKGR 545
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 546 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 605
BLAST of CSPI04G20560 vs. ExPASy TrEMBL
Match:
A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 3.0e-95
Identity = 184/338 (54.44%), Postives = 222/338 (65.68%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 912 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMP 971
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL Q KKP++YFS+ LS RDR+RPVYEREL+AVV+AVQ WR
Sbjct: 972 DFNLPFEIESDASGFGVGAVLVQDKKPVAYFSKVLSTRDRARPVYERELMAVVWAVQRWR 1031
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 1032 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 1091
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 1092 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREILSMIEEQGIEIPHYTCHQGILKFKGR 1151
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SK S+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 1152 LVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCEECMICQK 1211
BLAST of CSPI04G20560 vs. ExPASy TrEMBL
Match:
A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 3.0e-95
Identity = 184/338 (54.44%), Postives = 222/338 (65.68%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 912 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMP 971
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL Q KKP++YFS+ LS RDR+RPVYEREL+AVV+AVQ WR
Sbjct: 972 DFNLPFEIESDASGFGVGAVLVQDKKPVAYFSKVLSTRDRARPVYERELMAVVWAVQRWR 1031
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 1032 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIVKLLGYSFEVLYKPGLENKAADALSR 1091
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 1092 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREILSMIEEQGIEIPHYTCHQGILKFKGR 1151
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SK S+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 1152 LVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCEECMICQK 1211
BLAST of CSPI04G20560 vs. NCBI nr
Match:
KAA0063300.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 365.5 bits (937), Expect = 3.9e-97
Identity = 190/338 (56.21%), Postives = 223/338 (65.98%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PLIQLLKAGAYKW+ E E +F KLK+AMMTL P
Sbjct: 714 MRGFLGLTGYYRRFVQNYGSISAPLIQLLKAGAYKWTEETEAAFEKLKKAMMTLPVLAMP 773
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 774 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 833
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 834 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 893
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
RE+ +DP L+E S +E+ +IP ++ HQG+L+FKGR
Sbjct: 894 IGPTAHLNQLTAPALLDVEVIQREVRKDPALREIISLIEEQGIEIPRYTCHQGILKFKGR 953
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 954 LVLSKTSILIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 1013
BLAST of CSPI04G20560 vs. NCBI nr
Match:
KAA0041253.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 358.6 bits (919), Expect = 4.7e-95
Identity = 186/338 (55.03%), Postives = 224/338 (66.27%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 306 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMP 365
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 366 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 425
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 426 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 485
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 486 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREIISMIEEQGIEIPHYTCHQGILKFKGR 545
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 546 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 605
BLAST of CSPI04G20560 vs. NCBI nr
Match:
TYK16053.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 358.6 bits (919), Expect = 4.7e-95
Identity = 186/338 (55.03%), Postives = 224/338 (66.27%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 306 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMP 365
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL QAK+P++YFS+ LSMRDR+RPVYERELIAVV+AVQ WR
Sbjct: 366 DFNLPFEIESDASGFGVGAVLVQAKRPVAYFSKVLSMRDRARPVYERELIAVVWAVQRWR 425
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 426 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 485
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 486 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREIISMIEEQGIEIPHYTCHQGILKFKGR 545
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SKTS+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 546 LVLSKTSTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCDECMICQK 605
BLAST of CSPI04G20560 vs. NCBI nr
Match:
TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 358.2 bits (918), Expect = 6.2e-95
Identity = 184/338 (54.44%), Postives = 222/338 (65.68%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 852 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMP 911
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL Q KKP++YFS+ LS RDR+RPVYEREL+AVV+AVQ WR
Sbjct: 912 DFNLPFEIESDASGFGVGAVLVQDKKPVAYFSKVLSTRDRARPVYERELMAVVWAVQRWR 971
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 972 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 1031
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 1032 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREILSMIEEQGIEIPHYTCHQGILKFKGR 1091
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SK S+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 1092 LVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCEECMICQK 1151
BLAST of CSPI04G20560 vs. NCBI nr
Match:
TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 358.2 bits (918), Expect = 6.2e-95
Identity = 184/338 (54.44%), Postives = 222/338 (65.68%), Query Frame = 0
Query: 10 VRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTL-----P 69
+RGFLGLTGYYRRFVQNYG+I+ PL QLLK+GAYKW+ E E +F KLK+AMMTL P
Sbjct: 912 LRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMP 971
Query: 70 KFSLPFEIEMDASGYGVGVVLTQAKKPISYFSRTLSMRDRSRPVYERELIAVVFAVQGWR 129
F+LPFEIE DASG+GVG VL Q KKP++YFS+ LS RDR+RPVYEREL+AVV+AVQ WR
Sbjct: 972 DFNLPFEIESDASGFGVGAVLVQDKKPVAYFSKVLSTRDRARPVYERELMAVVWAVQRWR 1031
Query: 130 PGLLGR------------------------------------------------------ 189
P LLGR
Sbjct: 1032 PYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLENKAADALSR 1091
Query: 190 ----------------------REIDRDPKLKEFKSTVEKHQSDIPNFSIHQGVLQFKGR 249
+E+ +DP L+E S +E+ +IP+++ HQG+L+FKGR
Sbjct: 1092 IGPTAHLNQLTAPALLDVEVIQKEVRKDPALREILSMIEEQGIEIPHYTCHQGILKFKGR 1151
Query: 250 LVISKTSSLLSTILHTYHDSVFGGHSGFLRTYKRMMGELYWDGMKSD-KKYCAECLICQR 266
LV+SK S+L+ TI+HTYHDSVFGGHSGFLRTYKRM GELYW GMK D +KYC EC+ICQ+
Sbjct: 1152 LVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYCEECMICQK 1211
BLAST of CSPI04G20560 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 77.8 bits (190), Expect = 1.5e-14
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 7 TDRVRGFLGLTGYYRRFVQNYGNIAGPLIQLLKAGAYKWSAEAEISFAKLKRAMMTLPKF 66
T +RGFLGLTGYYRRFV+NYG I PL +LLK + KW+ A ++F LK A+ TLP
Sbjct: 63 TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122
Query: 67 SLP 70
+LP
Sbjct: 123 ALP 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P20825 | 1.1e-17 | 32.78 | Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... | [more] |
P04323 | 4.1e-17 | 38.52 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... | [more] |
P10401 | 2.7e-16 | 30.73 | Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... | [more] |
Q8I7P9 | 7.2e-14 | 29.12 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... | [more] |
P92523 | 2.1e-13 | 57.14 | Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V7S9 | 1.9e-97 | 56.21 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7TDM4 | 2.3e-95 | 55.03 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3CW07 | 2.3e-95 | 55.03 | Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5D3CXB1 | 3.0e-95 | 54.44 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7U2S1 | 3.0e-95 | 54.44 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |
KAA0063300.1 | 3.9e-97 | 56.21 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0041253.1 | 4.7e-95 | 55.03 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK16053.1 | 4.7e-95 | 55.03 | Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
TYK23090.1 | 6.2e-95 | 54.44 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK15990.1 | 6.2e-95 | 54.44 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 1.5e-14 | 57.14 | DNA/RNA polymerases superfamily protein | [more] |