CSPI04G19840 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G19840
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Spermidine synthase
Location	Chr4: 17666415 .. 17666869 (+)
RNA-Seq Expression	CSPI04G19840
Synteny	CSPI04G19840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCGATTTGTCGCCAAACATTCAAGGATGTTCACTATGCATGGACCAGTGTTCCAACATATCCAAGTGGTGTCATTGGGTTTCTGCTCTGTTCAACTGAAGGGCCAAAAGTTGATTTCAGGAATCCTGTGAATCCTATCGAGAATTTAGGACATCCCAAGTCCAAAAGAGAACTCAAGTTCTACAATTCTGAGGTAACAACACAGAAAACTCTCTAACATTTGACATTGTGGATTGAATAACCGACACAATTTGCTCTATATGTTTCAAATTCGATACAATTGTTGGTGTTAAAGATGATATGATACACATTTTGTGTCGATGGTAATAATGATTGGCATGCTAACAGATGCACTCGGCTGCTTTTGCGCTGCCATCGTTTCTGAAAAGGGAGGTGCAGGCACTTAACGATGCTCCAGCTTCGGGTAAAAATGGATGCATTTCATCGTAA

mRNA sequence

ATGATATCGATTTGTCGCCAAACATTCAAGGATGTTCACTATGCATGGACCAGTGTTCCAACATATCCAAGTGGTGTCATTGGGTTTCTGCTCTGTTCAACTGAAGGGCCAAAAGTTGATTTCAGGAATCCTGTGAATCCTATCGAGAATTTAGGACATCCCAAGTCCAAAAGAGAACTCAAGTTCTACAATTCTGAGATGCACTCGGCTGCTTTTGCGCTGCCATCGTTTCTGAAAAGGGAGGTGCAGGCACTTAACGATGCTCCAGCTTCGGGTAAAAATGGATGCATTTCATCGTAA

Coding sequence (CDS)

ATGATATCGATTTGTCGCCAAACATTCAAGGATGTTCACTATGCATGGACCAGTGTTCCAACATATCCAAGTGGTGTCATTGGGTTTCTGCTCTGTTCAACTGAAGGGCCAAAAGTTGATTTCAGGAATCCTGTGAATCCTATCGAGAATTTAGGACATCCCAAGTCCAAAAGAGAACTCAAGTTCTACAATTCTGAGATGCACTCGGCTGCTTTTGCGCTGCCATCGTTTCTGAAAAGGGAGGTGCAGGCACTTAACGATGCTCCAGCTTCGGGTAAAAATGGATGCATTTCATCGTAA

Protein sequence

MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKRELKFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS*

Homology

[Close]

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot
Match: Q94BN2 (Spermine synthase OS=Arabidopsis thaliana OX=3702 GN=SPMS PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-34
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot
Match: O48659 (Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-27
Identity = 56/86 (65.12%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MISICRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE-NLGHPKSKR 60
           ++S CRQ FK  V+YAWT+VPTYPSGVIGF+LCSTEGP VDF+NP+NPI+ +  H K++ 
Sbjct: 220 IVSNCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKNPINPIDADDSHTKTRG 279

Query: 61  ELKFYNSEMHSAAFALPSFLKREVQA 85
            LKFYNSE+HSA+F LPSF KR +++
Sbjct: 280 PLKFYNSEIHSASFCLPSFAKRVIES 305

[Close]

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot
Match: O48658 (Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.6e-27
Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1   MISICRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKRE 60
           +++ CRQ FK  V+YAWT+VPTYPSG+IGF+LCSTEGP VDF+NP+NPI++   PK+   
Sbjct: 228 IVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDDESGPKTIAP 287

Query: 61  LKFYNSEMHSAAFALPSFLKREVQA 85
           LKFYNSE+H A+F LPSF KR +++
Sbjct: 288 LKFYNSEIHQASFCLPSFAKRVIES 312

[Close]

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot
Match: Q96556 (Spermidine synthase 1 OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.7e-27
Identity = 54/86 (62.79%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MISICRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE-NLGHPKSKR 60
           +++ CRQ FK  V+YAWT+VPTYPSGVIGF+LCSTEGP VDF+NP+NP++ +  H K++ 
Sbjct: 220 IVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKNPINPVDADDSHTKTRG 279

Query: 61  ELKFYNSEMHSAAFALPSFLKREVQA 85
            LKFYNSE+HSA+F LPSF KR +++
Sbjct: 280 PLKFYNSEIHSASFCLPSFAKRVIES 305

[Close]

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot
Match: O82147 (Spermidine synthase OS=Coffea arabica OX=13443 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.0e-27
Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MISICRQTFK-DVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE-NLGHPKSKR 60
           +++ CRQ FK  V+YAWT+VPTYPSGVIGF+LCSTEGP VDF++P+NPI+ N G  K+ +
Sbjct: 228 IVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPINPIDANDGRSKTMK 287

Query: 61  ELKFYNSEMHSAAFALPSFLKREVQA 85
            LKFYNSE+HSAAF LPSF K+ + +
Sbjct: 288 PLKFYNSEIHSAAFCLPSFAKKVIDS 313

[Close]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL
Match: A0A0A0LC47 (PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G604620 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDF NPVNPIEN+GHPKSKREL
Sbjct: 270 MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFSNPVNPIENVGHPKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL
Match: A0A5D3BTV3 (Spermine synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00270 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISIC QTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE LGH KSKREL
Sbjct: 270 MISICCQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIEKLGHLKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREV+AL+DAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVKALSDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL
Match: A0A1S3B3T6 (spermine synthase-like OS=Cucumis melo OX=3656 GN=LOC103485695 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISIC QTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE LGH KSKREL
Sbjct: 270 MISICCQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIEKLGHLKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREV+AL+DAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVKALSDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL
Match: A0A6J1CJE6 (spermine synthase-like OS=Momordica charantia OX=3673 GN=LOC111011708 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL--GHPKSKR 60
           MISICR+TFKDVHYAWTSVPTYPSGVIGFLLCSTEGP VDFRNPVNPIENL   H KSKR
Sbjct: 270 MISICRETFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIENLVGQHLKSKR 329

Query: 61  ELKFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           ELKFYNSEMHSAAFALPSFLKREV+AL+DAP SGKNG ISS
Sbjct: 330 ELKFYNSEMHSAAFALPSFLKREVKALSDAPVSGKNGWISS 370

[Close]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL
Match: A0A6J1HVE7 (spermine synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111467782 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 88/99 (88.89%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGP VDFRNPVNPIE LGH KSKREL
Sbjct: 270 MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMH AAFALPSFLK EV+AL+DA AS K G ISS
Sbjct: 330 KFYNSEMHLAAFALPSFLKSEVKALSDASASLKKGSISS 368

[Close]

BLAST of CSPI04G19840 vs. NCBI nr
Match: XP_004150312.1 (spermine synthase [Cucumis sativus] >KGN58277.1 hypothetical protein Csa_017516 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 5.0e-50
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDF NPVNPIEN+GHPKSKREL
Sbjct: 270 MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFSNPVNPIENVGHPKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. NCBI nr
Match: XP_038878719.1 (spermine synthase-like [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 2.3e-47
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISICRQTFKDV YAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE LGH KSKREL
Sbjct: 270 MISICRQTFKDVCYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIEKLGHLKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREVQAL+DAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVQALSDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. NCBI nr
Match: XP_008441613.1 (PREDICTED: spermine synthase-like [Cucumis melo] >KAA0050471.1 spermine synthase-like [Cucumis melo var. makuwa] >TYK03151.1 spermine synthase-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.0e-47
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISIC QTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIE LGH KSKREL
Sbjct: 270 MISICCQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIEKLGHLKSKREL 329

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMHSAAFALPSFLKREV+AL+DAPASGKNGCISS
Sbjct: 330 KFYNSEMHSAAFALPSFLKREVKALSDAPASGKNGCISS 368

[Close]

BLAST of CSPI04G19840 vs. NCBI nr
Match: XP_022141267.1 (spermine synthase-like [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL--GHPKSKR 60
           MISICR+TFKDVHYAWTSVPTYPSGVIGFLLCSTEGP VDFRNPVNPIENL   H KSKR
Sbjct: 270 MISICRETFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIENLVGQHLKSKR 329

Query: 61  ELKFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           ELKFYNSEMHSAAFALPSFLKREV+AL+DAP SGKNG ISS
Sbjct: 330 ELKFYNSEMHSAAFALPSFLKREVKALSDAPVSGKNGWISS 370

[Close]

BLAST of CSPI04G19840 vs. NCBI nr
Match: KAG7013301.1 (Spermine synthase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42
Identity = 88/99 (88.89%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENLGHPKSKREL 60
           MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGP VDFRNPVNPIE LGH KSKREL
Sbjct: 271 MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPTVDFRNPVNPIEKLGHLKSKREL 330

Query: 61  KFYNSEMHSAAFALPSFLKREVQALNDAPASGKNGCISS 100
           KFYNSEMH AAFALPSFLK EV+AL+DA AS K G ISS
Sbjct: 331 KFYNSEMHLAAFALPSFLKSEVKALSDASASLKKGSISS 369

[Close]

BLAST of CSPI04G19840 vs. TAIR 10
Match: AT5G53120.1 (spermidine synthase 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of CSPI04G19840 vs. TAIR 10
Match: AT5G53120.2 (spermidine synthase 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of CSPI04G19840 vs. TAIR 10
Match: AT5G53120.3 (spermidine synthase 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of CSPI04G19840 vs. TAIR 10
Match: AT5G53120.4 (spermidine synthase 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

[Close]

BLAST of CSPI04G19840 vs. TAIR 10
Match: AT5G53120.5 (spermidine synthase 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1   MISICRQTFKDVHYAWTSVPTYPSGVIGFLLCSTEGPKVDFRNPVNPIENL-GHPKSKRE 60
           MISICRQTFK VHYAW+SVPTYPSGVIGF+LCSTEGP VDF+NP+NPIE L G    KRE
Sbjct: 271 MISICRQTFKSVHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRE 330

Query: 61  LKFYNSEMHSAAFALPSFLKREVQAL 86
           LKFYNS+MH AAFALP+FL+REV +L
Sbjct: 331 LKFYNSDMHRAAFALPTFLRREVASL 356

The following BLAST results are available for this feature:

BLAST of CSPI04G19840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BN2	2.3e-34	79.07	Spermine synthase OS=Arabidopsis thaliana OX=3702 GN=SPMS PE=1 SV=1	[more]
O48659	1.6e-27	65.12	Spermidine synthase 2 OS=Hyoscyamus niger OX=4079 PE=2 SV=1	[more]
O48658	3.6e-27	62.35	Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1	[more]
Q96556	4.7e-27	62.79	Spermidine synthase 1 OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
O82147	8.0e-27	63.95	Spermidine synthase OS=Coffea arabica OX=13443 PE=2 SV=1	[more]

BLAST of CSPI04G19840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC47	2.4e-50	97.98	PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G604620 PE=3 S...	[more]
A0A5D3BTV3	1.5e-47	94.95	Spermine synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3B3T6	1.5e-47	94.95	spermine synthase-like OS=Cucumis melo OX=3656 GN=LOC103485695 PE=3 SV=1	[more]
A0A6J1CJE6	5.7e-44	90.10	spermine synthase-like OS=Momordica charantia OX=3673 GN=LOC111011708 PE=3 SV=1	[more]
A0A6J1HVE7	1.8e-42	88.89	spermine synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111467782 PE=3 SV=1	[more]

BLAST of CSPI04G19840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150312.1	5.0e-50	97.98	spermine synthase [Cucumis sativus] >KGN58277.1 hypothetical protein Csa_017516 ...	[more]
XP_038878719.1	2.3e-47	95.96	spermine synthase-like [Benincasa hispida]	[more]
XP_008441613.1	3.0e-47	94.95	PREDICTED: spermine synthase-like [Cucumis melo] >KAA0050471.1 spermine synthase...	[more]
XP_022141267.1	1.2e-43	90.10	spermine synthase-like [Momordica charantia]	[more]
KAG7013301.1	3.8e-42	88.89	Spermine synthase [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CSPI04G19840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53120.1	1.7e-35	79.07	spermidine synthase 3	[more]
AT5G53120.2	1.7e-35	79.07	spermidine synthase 3	[more]
AT5G53120.3	1.7e-35	79.07	spermidine synthase 3	[more]
AT5G53120.4	1.7e-35	79.07	spermidine synthase 3	[more]
AT5G53120.5	1.7e-35	79.07	spermidine synthase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 1..86 e-value: 2.6E-23 score: 84.7
None	No IPR available	PANTHER	PTHR11558:SF25	SPERMINE SYNTHASE	coord: 1..91
IPR001045	Spermidine/spermine synthases	PANTHER	PTHR11558	SPERMIDINE/SPERMINE SYNTHASE	coord: 1..91
IPR030374	Polyamine biosynthesis domain	PROSITE	PS51006	PABS_2	coord: 1..34 score: 12.753634
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 2..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19840.1	CSPI04G19840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006596	polyamine biosynthetic process
molecular_function	GO:0004766	spermidine synthase activity
molecular_function	GO:0003824	catalytic activity