CSPI04G17860 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G17860
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 15309797 .. 15309961 (-)
RNA-Seq ExpressionCSPI04G17860
SyntenyCSPI04G17860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAATTTGGAAGTTGGTACAGCAAGGGCAGACGTCTAGATGAAAACGTGAAAACTGAAAAGGCAACTGCAATCTCCCTCTTGCTCCGACAACACAAACGCTACCTTCAGGCTCCTTCGATGCTGGCGCTCCCTCCGGTCGATGACTCAAACGATAGGTAG

mRNA sequence

ATGCCAAAATTTGGAAGTTGGTACAGCAAGGGCAGACGTCTAGATGAAAACGTGAAAACTGAAAAGGCAACTGCAATCTCCCTCTTGCTCCGACAACACAAACGCTACCTTCAGGCTCCTTCGATGCTGGCGCTCCCTCCGGTCGATGACTCAAACGATAGGTAG

Coding sequence (CDS)

ATGCCAAAATTTGGAAGTTGGTACAGCAAGGGCAGACGTCTAGATGAAAACGTGAAAACTGAAAAGGCAACTGCAATCTCCCTCTTGCTCCGACAACACAAACGCTACCTTCAGGCTCCTTCGATGCTGGCGCTCCCTCCGGTCGATGACTCAAACGATAGGTAG

Protein sequence

MPKFGSWYSKGRRLDENVKTEKATAISLLLRQHKRYLQAPSMLALPPVDDSNDR*
Homology
[Close]
BLAST of CSPI04G17860 vs. ExPASy TrEMBL
Match: A0A0A0L0K4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G364000 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1  MPKFGSWYSKGRRLDENVKTEKATAISLLLRQHKRYLQAPSMLALPPVDDSND 54
          MPKFGSWYSKGRR DEN+K EKA AISLLLRQHKRYL+APSMLALPPVDD+ND
Sbjct: 1  MPKFGSWYSKGRRPDENMKIEKAIAISLLLRQHKRYLRAPSMLALPPVDDAND 53

[Close]
BLAST of CSPI04G17860 vs. NCBI nr
Match: KGN54569.1 (hypothetical protein Csa_012591 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 4.7e-18
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0 

Query: 1  MPKFGSWYSKGRRLDENVKTEKATAISLLLRQHKRYLQAPSMLALPPVDDSND 54
          MPKFGSWYSKGRR DEN+K EKA AISLLLRQHKRYL+APSMLALPPVDD+ND
Sbjct: 1  MPKFGSWYSKGRRPDENMKIEKAIAISLLLRQHKRYLRAPSMLALPPVDDAND 53

The following BLAST results are available for this feature:
BLAST of CSPI04G17860 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G17860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0K42.3e-1888.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G364000 PE=4 SV=1[more]
BLAST of CSPI04G17860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54569.14.7e-1888.68hypothetical protein Csa_012591 [Cucumis sativus][more]
BLAST of CSPI04G17860 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G17860.1CSPI04G17860.1mRNA