CSPI04G17280 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G17280
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr4: 14800381 .. 14801848 (+)
RNA-Seq Expression	CSPI04G17280
Synteny	CSPI04G17280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGGCTGGCCCAGAGAGCAGAGAATAGGGAAATCGTACGAAGGGAAGCGAATCTGCACGGATACTCTGGAGGTAAATATTCCTTGTACCCTTCGAACTCAAATAAATCTAATTCTACTACTATTACAAATGATAATAAGACTGCAACTACTTTCCCTATGAGAATGATCATGTTGAGAGGTGCAGCGTTCGGGGAAACAAAAAAAGAAGGCCCTTCAAAAAGGCTTTCTGATGCTGAATTTCAGGCAAAAAGAGAGAAAGGACTGTGCTTTAAATGTGATGAGAAATACTATTCCGAACACAAATGCAAGGTGAGAGAACTAAGGGAGTTGAGAATGTTTGTTGTGCGAGCAAACAATGTAGAAGAAGAGATCATCGAAGACGATGATTGTGAATAGAAGGAACTGAATTCAATTGAAAAAGAGGATGGAGTTAGCACAATGGTGGAGCTGTCCATCAATTTCGTGGTTGGATTGACAAATCCAGGCACCATGAAGGTTAGGGGAAAAATATTGGGAGAAGTGGTGATTGTGGGGTACGCAAAATTTTGTATTCGAAAAATTAGTGGCCAAGCTGAAGTTGCATATAAAGGATATTTCTAATTATGGAGTAATCCTAGGTTCTGGAACAGGCATCAAGGGAAAAGGAGTATGCGAAAACGTAGAGGTGGTGTTGAATGAATGGAGGGTGGTGGAGAGCTTCCTTTCGTTAGAGATAGGAGGAGTTGATGTGATCCTTGGGATGCTGTGGTTGTATTCATTAGGAGTGACTGAAATGGATTGGAAGAATTTGACAATGACATTCTTCCATGACAACAACAAAATAATCATTAAAGGAAATCCCAGCCTGACGAATGGATTCCTAATTGAATGTAGGGCCTTGAGGGTGGAGTGATGATTACAAAAGAATCAGAGGAAGGAGGAATGGCAATATTACAAAAAGGTGTTTCAACAGTTCTGGCTAAGTTCGAGGATGTGTTTGACCGGCCTGAAGAGCTACCCCTACAGAGAACCATTGAACATCATATATACCTAAAGAGAGGCACGGATCCCGTCAATGTCAGACCATATAGTTATGCATACCAACAGGAGGAAATGGAAAGATTGGTGGATGAGATGTATTAAACCACCAATTCACCCAAAAGCTTAAGTTGGTGGTTGAAGACAAATTTAATTATATATCACCAACAAGATGCTCTCTTTAAGAGTTATCCAACCGAGTACTAGACCATATTCAAGCCCGGTTCTTCTGTTGGTGCAAAATAAAGATGGCAGTTGGAGATCCTGTGTCGACTACAGGGCCCTTAACAACGTAAAGATTCCAGATAAGTTTTCCATTCCTGTCGTAGAGGAGCTTTTTGATGAATTGAATGGTGCTACCTTATTCTTTAAAATAGATCCGAAAGCCGGTTACCATCAGATTAGAATGTGTGGGGAAGACATACATAGAGAAAACAGCCGTTAA

mRNA sequence

ATGATGAGGCTGGCCCAGAGAGCAGAGAATAGGGAAATCGTACGAAGGGAAGCGAATCTGCACGGATACTCTGGAGGTAAATATTCCTTGTACCCTTCGAACTCAAATAAATCTAATTCTACTACTATTACAAATGATAATAAGACTGCAACTACTTTCCCTATGAGAATGATCATGTTGAGAGGTGCAGCGTTCGGGGAAACAAAAAAAGAAGGCCCTTCAAAAAGGCTTTCTGATGCTGAATTTCAGGCAAAAAGAGAGAAAGGACTGTGCTTTAAATGTGATGAGAAATACTATTCCGAACACAAATGCAAGAAGGAACTGAATTCAATTGAAAAAGAGGATGGAGTTAGCACAATGGTGGAGCTGTCCATCAATTTCGTGGTTGGATTGACAAATCCAGGCACCATGAAGGATATTTCTAATTATGGAGTAATCCTAGGTTCTGGAACAGGCATCAAGGGAAAAGGAGTATGCGAAAACGTAGAGGTGGTGTTGAATGAATGGAGGGTGGTGGAGAGCTTCCTTTCGTTAGAGATAGGAGGAGTTGATGTGATCCTTGGGATGCTGTGGTTGTATTCATTAGGAGGCCTTGAGGGTGGAGTGATGATTACAAAAGAATCAGAGGAAGGAGGAATGGCAATATTACAAAAAGGTGTTTCAACAGTTCTGGCTAAGTTCGAGGATGTGTTTGACCGGCCTGAAGAGCTACCCCTACAGAGAACCATTGAACATCATATATACCTAAAGAGAGGCACGGATCCCGTCAATGTCAGACCATATAGTTATGCATACCAACAGGAGGAAATGGAAAGATTGGTGGATGAGATAGTTATCCAACCGAGTACTAGACCATATTCAAGCCCGGTTCTTCTGTTGGTGCAAAATAAAGATGGCAGTTGGAGATCCTGTGTCGACTACAGGGCCCTTAACAACGTAAAGATTCCAGATAAGTTTTCCATTCCTGTCGTAGAGGAGCTTTTTGATGAATTGAATGGTGCTACCTTATTCTTTAAAATAGATCCGAAAGCCGGTTACCATCAGATTAGAATGTGTGGGGAAGACATACATAGAGAAAACAGCCGTTAA

Coding sequence (CDS)

ATGATGAGGCTGGCCCAGAGAGCAGAGAATAGGGAAATCGTACGAAGGGAAGCGAATCTGCACGGATACTCTGGAGGTAAATATTCCTTGTACCCTTCGAACTCAAATAAATCTAATTCTACTACTATTACAAATGATAATAAGACTGCAACTACTTTCCCTATGAGAATGATCATGTTGAGAGGTGCAGCGTTCGGGGAAACAAAAAAAGAAGGCCCTTCAAAAAGGCTTTCTGATGCTGAATTTCAGGCAAAAAGAGAGAAAGGACTGTGCTTTAAATGTGATGAGAAATACTATTCCGAACACAAATGCAAGAAGGAACTGAATTCAATTGAAAAAGAGGATGGAGTTAGCACAATGGTGGAGCTGTCCATCAATTTCGTGGTTGGATTGACAAATCCAGGCACCATGAAGGATATTTCTAATTATGGAGTAATCCTAGGTTCTGGAACAGGCATCAAGGGAAAAGGAGTATGCGAAAACGTAGAGGTGGTGTTGAATGAATGGAGGGTGGTGGAGAGCTTCCTTTCGTTAGAGATAGGAGGAGTTGATGTGATCCTTGGGATGCTGTGGTTGTATTCATTAGGAGGCCTTGAGGGTGGAGTGATGATTACAAAAGAATCAGAGGAAGGAGGAATGGCAATATTACAAAAAGGTGTTTCAACAGTTCTGGCTAAGTTCGAGGATGTGTTTGACCGGCCTGAAGAGCTACCCCTACAGAGAACCATTGAACATCATATATACCTAAAGAGAGGCACGGATCCCGTCAATGTCAGACCATATAGTTATGCATACCAACAGGAGGAAATGGAAAGATTGGTGGATGAGATAGTTATCCAACCGAGTACTAGACCATATTCAAGCCCGGTTCTTCTGTTGGTGCAAAATAAAGATGGCAGTTGGAGATCCTGTGTCGACTACAGGGCCCTTAACAACGTAAAGATTCCAGATAAGTTTTCCATTCCTGTCGTAGAGGAGCTTTTTGATGAATTGAATGGTGCTACCTTATTCTTTAAAATAGATCCGAAAGCCGGTTACCATCAGATTAGAATGTGTGGGGAAGACATACATAGAGAAAACAGCCGTTAA

Protein sequence

MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIMLRGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKCKKELNSIEKEDGVSTMVELSINFVVGLTNPGTMKDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFLSLEIGGVDVILGMLWLYSLGGLEGGVMITKESEEGGMAILQKGVSTVLAKFEDVFDRPEELPLQRTIEHHIYLKRGTDPVNVRPYSYAYQQEEMERLVDEIVIQPSTRPYSSPVLLLVQNKDGSWRSCVDYRALNNVKIPDKFSIPVVEELFDELNGATLFFKIDPKAGYHQIRMCGEDIHRENSR*

Homology

[Close]

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 4.6e-16
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 243 IEHHIYLKRGTDPVNVRPYSYAYQQEE-----MERLVDEIVIQPSTRPYSSPVLLLVQNK 302
           ++H I +K G     ++PY    + E+     +++L+D   I PS  P SSPV +LV  K
Sbjct: 584 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPV-VLVPKK 643

Query: 303 DGSWRSCVDYRALNNVKIPDKFSIPVVEELFDELNGATLFFKIDPKAGYHQIRMCGEDIH 359
           DG++R CVDYR LN   I D F +P ++ L   +  A +F  +D  +GYHQI M  +D +
Sbjct: 644 DGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRY 703

[Close]

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 4.6e-16
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 243 IEHHIYLKRGTDPVNVRPYSYAYQQEE-----MERLVDEIVIQPSTRPYSSPVLLLVQNK 302
           ++H I +K G     ++PY    + E+     +++L+D   I PS  P SSPV +LV  K
Sbjct: 610 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPV-VLVPKK 669

Query: 303 DGSWRSCVDYRALNNVKIPDKFSIPVVEELFDELNGATLFFKIDPKAGYHQIRMCGEDIH 359
           DG++R CVDYR LN   I D F +P ++ L   +  A +F  +D  +GYHQI M  +D +
Sbjct: 670 DGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRY 729

[Close]

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 48/164 (29.27%), Postives = 83/164 (50.61%), Query Frame = 0


Query: 203 MITKESEEGGMAILQKGVSTVLAKFEDVFDRP-EELPLQRTIEHHIYLKRGTDPVNVRPY 262
           ++  E  +G   IL    +++L +F  +F+ P   + ++  ++  I      DP+  + Y
Sbjct: 75  LLAAEHPDGTQEIL----NSLLGEFPRIFEPPLSGMSVETAVKAEIRTNT-QDPIYAKSY 134

Query: 263 SYAYQQE-EMERLVDEI----VIQPSTRPYSSPVLLLVQ----NKDGSWRSCVDYRALNN 322
            Y      E+ER +DE+    +I+PS  PY+SP+ ++ +    N +  +R  VD++ LN 
Sbjct: 135 PYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNT 194

Query: 323 VKIPDKFSIPVVEELFDELNGATLFFKIDPKAGYHQIRMCGEDI 357
           V IPD + IP +      L  A  F  +D  +G+HQI M   DI
Sbjct: 195 VTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDI 233

[Close]

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12
Identity = 40/144 (27.78%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 223 VLAKFEDV-FDRPEELPLQRTIEHHIYLKRGTDPVNVRPYSYAYQQE---EMERLVDEIV 282
           +L K+ D+ +   ++L      +H I  K      +   Y  AY+QE   +++ ++++ +
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQEVESQIQDMLNQGI 235

Query: 283 IQPSTRPYSSPVLLLVQNKDGS----WRSCVDYRALNNVKIPDKFSIPVVEELFDELNGA 342
           I+ S  PY+SP+ ++ + +D S    +R  +DYR LN + + D+  IP ++E+  +L   
Sbjct: 236 IRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRC 295

Query: 343 TLFFKIDPKAGYHQIRMCGEDIHR 359
             F  ID   G+HQI M  E + +
Sbjct: 296 NYFTTIDLAKGFHQIEMDPESVSK 319

[Close]

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.4e-12
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 223 VLAKFEDV-FDRPEELPLQRTIEHHIYLKRGTDPVNVRPYSYAYQQE-EMERLVDEI--- 282
           +L KF ++ +   E+L    TI+H +     + P+  + Y  A   E E+E  V E+   
Sbjct: 174 LLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNS-PIYSKQYPLAQTHEIEVENQVQEMLNQ 233

Query: 283 -VIQPSTRPYSSPVLLLVQNKDGS----WRSCVDYRALNNVKIPDKFSIPVVEELFDELN 342
            +I+ S  PY+SP  ++ +  D S    +R  +DYR LN + IPD++ IP ++E+  +L 
Sbjct: 234 GLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLG 293

Query: 343 GATLFFKIDPKAGYHQIRMCGEDIHR 359
               F  ID   G+HQI M  E I +
Sbjct: 294 KCQYFTTIDLAKGFHQIEMDEESISK 318

[Close]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL
Match: A0A5A7UDR7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00190 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.5e-97
Identity = 217/446 (48.65%), Postives = 272/446 (60.99%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM +AQ  ENREI R EA + GYSGGK + + S   K+++  +  DNK  T FP+R I L
Sbjct: 139 MMEVAQMVENREIARAEAKMCGYSGGKIAGHNSVVGKTSTGGVAGDNKNNTVFPIRTITL 198

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKCK--------------- 120
           R +A  E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC+               
Sbjct: 199 RSSAPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLKEQRELRMFVVTEG 258

Query: 121 -------------KELNSIEKEDGVSTMVELSINFVVGLTNPGTMKDISNYGVILGSGTG 180
                        KEL  IE  + ++T+VELSIN VVGL +PGTMK       + GSG  
Sbjct: 259 REEYEIVEDEKEEKELGCIEINENLTTVVELSINSVVGLNDPGTMK-------VRGSGAA 318

Query: 181 IKGKGVCENVEVVLNEWRVVESFLSLEIGGVDVILGMLWLYSLG---------------- 240
           ++GKGVCE +EV L  W++VE FL LE+GGVDVILGM WLYSLG                
Sbjct: 319 VQGKGVCEKLEVQLKGWKIVEDFLPLELGGVDVILGMRWLYSLGVTTVDWKNLSLSFVAE 378

Query: 241 ----GLEGGVMITK------------ESEEGGMAI----LQ------------------K 300
                ++G   +TK            E ++ G  I    LQ                  K
Sbjct: 379 GKEVNIKGDPSLTKARISLKNMIKNWEEKDSGFLIECRSLQVKTVEDEECYLLNTEVESK 438

Query: 301 G-VSTVLAKFEDVFDRPEELPLQRTIEHHIYLKRGTDPVNVRPYSYAY-QQEEMERLVDE 359
           G + +V+ +F DVF+ PE+LP +R IEHHI+LK GT+P+NVRPY Y + Q+EEME+LV E
Sbjct: 439 GRIGSVIKQFRDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEMEKLVQE 498

[Close]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL
Match: A0A5D3DT65 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00960 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 5.6e-97
Identity = 217/486 (44.65%), Postives = 276/486 (56.79%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGG+ +   +   K+++  I  DNK  T FP+R I L
Sbjct: 267 MMEAAQMVENREIARIEAKMSGYSGGRLTANNNAVGKTSTGAIAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTDD 386

Query: 121 ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                       ++EL+ IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERRELSCIELKEDVTTVVELSINSVVGLNDPGTMKVRGKLCGEEVVVLI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV +  W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVCEKLEVQIGGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+ +  +S+V+ +F DVFD PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKTLEENEHSWFSTEAVSKAVSEGPISSVIEQFSDVFDWPEKL 626

[Close]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL
Match: A0A5A7TU09 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001680 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 5.6e-97
Identity = 218/486 (44.86%), Postives = 275/486 (56.58%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGGK S+  +   K++   +  DNK  T FP+R I L
Sbjct: 267 MMEAAQLVENREIARVEAKMSGYSGGKLSVNNNVVGKASIGAVAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKCK--------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKCK               
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCKLREQRELRMFVVTAE 386

Query: 121 -------------KELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                         ELN IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERTELNCIELKEDVATVVELSINSVVGLNDPGTMKVRGKLFGEEVVILI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV ++ W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLSIKETSHYGVILGSGAAVQGKGVCEKLEVQMSGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+    +S+V+ +F+DVF+ PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKLLEGNEYSLFSTEAVSNALSDGSISSVIKQFQDVFEWPEKL 626

[Close]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL
Match: A0A5D3BH93 (Dual specificity protein phosphatase PHS1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00120 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 7.3e-97
Identity = 216/486 (44.44%), Postives = 273/486 (56.17%), Query Frame = 0


Query: 1    MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
            MM +AQ  ENREI R EA + GYSGGK + + S   K+ +  +  DNK  T FP+R I L
Sbjct: 882  MMEVAQMVENREIARTEAKMSGYSGGKIAGHNSVVGKTTTGGVAGDNKNNTVFPIRTITL 941

Query: 61   RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
            R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 942  RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTAE 1001

Query: 121  ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                        +KEL  IE ++ ++T+VELSIN VVGL +PGTM               
Sbjct: 1002 RDEYEIVEEENERKELGCIELKEDITTVVELSINSVVGLNDPGTMKVRGKLFGEEVIILI 1061

Query: 181  ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                 K+ S+YGVILGSG  ++GKG+CE +EV L+ W++VE FL
Sbjct: 1062 DCGATHNFVSEKLVKKLTLPIKETSHYGVILGSGAAVQGKGICEKLEVQLSSWKIVEDFL 1121

Query: 241  SLEIGGVDVILGMLWLYSLG---------------------------------------- 300
            SLE+GGVDVILGM WLYSLG                                        
Sbjct: 1122 SLELGGVDVILGMQWLYSLGVTTVDWKNLSLTFMADGKEVKIKGDPSLTKARISLKNMMK 1181

Query: 301  -------------------GLEGGVMITKESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                LEG       +E    A+    +STV+ +F DVF+ PE+L
Sbjct: 1182 NWEDKDTGFLIECRSLQVKALEGDEYCLLNAEAVSDAMSDGPISTVIKQFPDVFEWPEKL 1241

[Close]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL
Match: A0A5A7UW98 (Dual specificity protein phosphatase PHS1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00120 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 7.3e-97
Identity = 216/486 (44.44%), Postives = 273/486 (56.17%), Query Frame = 0


Query: 1    MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
            MM +AQ  ENREI R EA + GYSGGK + + S   K+ +  +  DNK  T FP+R I L
Sbjct: 1098 MMEVAQMVENREIARTEAKMSGYSGGKIAGHNSVVGKTTTGGVAGDNKNNTVFPIRTITL 1157

Query: 61   RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
            R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 1158 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTAE 1217

Query: 121  ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                        +KEL  IE ++ ++T+VELSIN VVGL +PGTM               
Sbjct: 1218 RDEYEIVEEENERKELGCIELKEDITTVVELSINSVVGLNDPGTMKVRGKLFGEEVIILI 1277

Query: 181  ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                 K+ S+YGVILGSG  ++GKG+CE +EV L+ W++VE FL
Sbjct: 1278 DCGATHNFVSEKLVKKLTLPIKETSHYGVILGSGAAVQGKGICEKLEVQLSSWKIVEDFL 1337

Query: 241  SLEIGGVDVILGMLWLYSLG---------------------------------------- 300
            SLE+GGVDVILGM WLYSLG                                        
Sbjct: 1338 SLELGGVDVILGMQWLYSLGVTTVDWKNLSLTFMADGKEVKIKGDPSLTKARISLKNMMK 1397

Query: 301  -------------------GLEGGVMITKESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                LEG       +E    A+    +STV+ +F DVF+ PE+L
Sbjct: 1398 NWEDKDTGFLIECRSLQVKALEGDEYCLLNAEAVSDAMSDGPISTVIKQFPDVFEWPEKL 1457

[Close]

BLAST of CSPI04G17280 vs. NCBI nr
Match: KAA0053364.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 5.2e-97
Identity = 217/446 (48.65%), Postives = 272/446 (60.99%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM +AQ  ENREI R EA + GYSGGK + + S   K+++  +  DNK  T FP+R I L
Sbjct: 139 MMEVAQMVENREIARAEAKMCGYSGGKIAGHNSVVGKTSTGGVAGDNKNNTVFPIRTITL 198

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKCK--------------- 120
           R +A  E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC+               
Sbjct: 199 RSSAPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLKEQRELRMFVVTEG 258

Query: 121 -------------KELNSIEKEDGVSTMVELSINFVVGLTNPGTMKDISNYGVILGSGTG 180
                        KEL  IE  + ++T+VELSIN VVGL +PGTMK       + GSG  
Sbjct: 259 REEYEIVEDEKEEKELGCIEINENLTTVVELSINSVVGLNDPGTMK-------VRGSGAA 318

Query: 181 IKGKGVCENVEVVLNEWRVVESFLSLEIGGVDVILGMLWLYSLG---------------- 240
           ++GKGVCE +EV L  W++VE FL LE+GGVDVILGM WLYSLG                
Sbjct: 319 VQGKGVCEKLEVQLKGWKIVEDFLPLELGGVDVILGMRWLYSLGVTTVDWKNLSLSFVAE 378

Query: 241 ----GLEGGVMITK------------ESEEGGMAI----LQ------------------K 300
                ++G   +TK            E ++ G  I    LQ                  K
Sbjct: 379 GKEVNIKGDPSLTKARISLKNMIKNWEEKDSGFLIECRSLQVKTVEDEECYLLNTEVESK 438

Query: 301 G-VSTVLAKFEDVFDRPEELPLQRTIEHHIYLKRGTDPVNVRPYSYAY-QQEEMERLVDE 359
           G + +V+ +F DVF+ PE+LP +R IEHHI+LK GT+P+NVRPY Y + Q+EEME+LV E
Sbjct: 439 GRIGSVIKQFRDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEMEKLVQE 498

[Close]

BLAST of CSPI04G17280 vs. NCBI nr
Match: KAA0040118.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 6.7e-97
Identity = 218/486 (44.86%), Postives = 276/486 (56.79%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGG+ +   +   K+++  I  DNK  T FP+R I L
Sbjct: 267 MMEAAQMVENREIARIEAKMSGYSGGRLTANNNAVGKTSTGAIAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTDD 386

Query: 121 ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                       +KEL+ IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERKELSCIELKEDVTTVVELSINSVVGLNDPGTMKVRGKLCGEEVVVLI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV +  W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVCEKLEVQMGGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+ +  +S+V+ +F DVFD PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAVSKAVSEGPISSVIEQFSDVFDWPEKL 626

[Close]

BLAST of CSPI04G17280 vs. NCBI nr
Match: TYK20833.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26440.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK31252.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-96
Identity = 217/486 (44.65%), Postives = 276/486 (56.79%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGG+ +   +   K+++  I  DNK  T FP+R I L
Sbjct: 267 MMEAAQMVENREIARIEAKMSGYSGGRLTANNNAVGKTSTGAIAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTDD 386

Query: 121 ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                       ++EL+ IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERRELSCIELKEDVTTVVELSINSVVGLNDPGTMKVRGKLCGEEVVVLI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV +  W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVCEKLEVQIGGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+ +  +S+V+ +F DVFD PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKTLEENEHSWFSTEAVSKAVSEGPISSVIEQFSDVFDWPEKL 626

[Close]

BLAST of CSPI04G17280 vs. NCBI nr
Match: KAA0044875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-96
Identity = 218/486 (44.86%), Postives = 275/486 (56.58%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGGK S+  +   K++   +  DNK  T FP+R I L
Sbjct: 267 MMEAAQLVENREIARVEAKMSGYSGGKLSVNNNVVGKASIGAVAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKCK--------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKCK               
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCKLREQRELRMFVVTAE 386

Query: 121 -------------KELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                         ELN IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERTELNCIELKEDVATVVELSINSVVGLNDPGTMKVRGKLFGEEVVILI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV ++ W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLSIKETSHYGVILGSGAAVQGKGVCEKLEVQMSGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+    +S+V+ +F+DVF+ PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKLLEGNEYSLFSTEAVSNALSDGSISSVIKQFQDVFEWPEKL 626

[Close]

BLAST of CSPI04G17280 vs. NCBI nr
Match: TYK20792.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-96
Identity = 217/486 (44.65%), Postives = 276/486 (56.79%), Query Frame = 0


Query: 1   MMRLAQRAENREIVRREANLHGYSGGKYSLYPSNSNKSNSTTITNDNKTATTFPMRMIML 60
           MM  AQ  ENREI R EA + GYSGGK +   +   K+++  I  DNK  T FP+R I L
Sbjct: 267 MMEAAQMVENREIARTEAKMSGYSGGKLTANNNVVGKTSTGAIAGDNKNNTVFPIRTITL 326

Query: 61  RGAAFGETKKEGPSKRLSDAEFQAKREKGLCFKCDEKYYSEHKC---------------- 120
           R +   E ++EG  KRL DAEFQA++EKGLCF+C+EKY ++HKC                
Sbjct: 327 RSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTAE 386

Query: 121 ------------KKELNSIEKEDGVSTMVELSINFVVGLTNPGTM--------------- 180
                       ++EL+ IE ++ V+T+VELSIN VVGL +PGTM               
Sbjct: 387 RDEYEIVEEENERRELSCIELKEDVTTVVELSINSVVGLNDPGTMKVRGKLCGEEVVILI 446

Query: 181 ---------------------KDISNYGVILGSGTGIKGKGVCENVEVVLNEWRVVESFL 240
                                K+ S+YGVILGSG  ++GKGVCE +EV +  W++VE FL
Sbjct: 447 DCGATHNFVSEKLVKKLSLPIKETSHYGVILGSGAAVQGKGVCEKLEVQMGGWKIVEDFL 506

Query: 241 SLEIGGVDVILGMLWLYSLG--------------------GLEGGVMITK---------- 300
            LE+GGVDVILGM WLYSLG                     ++G   +TK          
Sbjct: 507 PLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFIADGKEVKIKGDPSLTKARISLKKLIK 566

Query: 301 -----------------------------ESEEGGMAILQKGVSTVLAKFEDVFDRPEEL 359
                                         +E    A+ +  +S+V+ +F DVF+ PE+L
Sbjct: 567 NWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAVSKAVSEGPISSVIEQFSDVFEWPEKL 626

The following BLAST results are available for this feature:

BLAST of CSPI04G17280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	4.6e-16	37.19	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	4.6e-16	37.19	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	1.3e-13	29.27	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P04323	1.8e-12	27.78	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.4e-12	32.19	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of CSPI04G17280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDR7	2.5e-97	48.65	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DT65	5.6e-97	44.65	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TU09	5.6e-97	44.86	Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BH93	7.3e-97	44.44	Dual specificity protein phosphatase PHS1 isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A5A7UW98	7.3e-97	44.44	Dual specificity protein phosphatase PHS1 isoform X1 OS=Cucumis melo var. makuwa...	[more]

BLAST of CSPI04G17280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053364.1	5.2e-97	48.65	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0040118.1	6.7e-97	44.86	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK20833.1	1.2e-96	44.65	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26440.1 Ty3/gyp...	[more]
KAA0044875.1	1.2e-96	44.86	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK20792.1	1.2e-96	44.65	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G17280 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 319..346 e-value: 5.3E-30 score: 106.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 243..357 e-value: 5.3E-30 score: 106.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 221..358
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 221..358
None	No IPR available	CDD	cd01647	RT_LTR	coord: 278..357 e-value: 2.98514E-25 score: 98.4365
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 223..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17280.1	CSPI04G17280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity