CSPI04G17180 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATTTCAAGGAAAAGAGAAGCTTTTTTCTTTTCTCTCAATACTCTCATCGTCTCTGTTTCCTCCCATTCTTCTTCTTTCTTAGTTTGGTTCCTGAGAATAATCAGAGCCACCGAGAGTTTTCAAAGGTAGTCTTTTCCTCATCTGGGTTTTCATTTTTCTCACTTTAACGCCAACCCCTTTTGATTCGTTTCTGACTTTTGTTTTTCTCACTCTAATCATGTTTCTGCTCACAATCTCATTTCGATAATCTTCTTTTCCATCTCTTTACTTACTAATTGCTTGATTCCTTTCCGATTAGGATAAATGGGGCTTCTTGTTCTTGTTACTTTATTTTGAATGTGTAAATGGGGATGAGGGATTTTGGAGAATTAGGGTTTTTCTTGATTGTTCTTACCCTCGATTGGAACATTTGTTTCTATCAGGGTTTGTTCTTCCGATTCTGAAGTTTGCGAATTTGGAGTTAGTTTTAGCAATCACTGCACTTCTTTTTCAGTATTTTTATTAATTTAAAAGCCGCGGCATCTGATTCGTGTATCGCTTCCATGAATTGCGGCTCCGAGACACTGCTTTACGGGAATAAAGAGTTCTAACAATGCTTTAGTTTCCCTGTGAAACTTCACTTTTGGGGTTTTAGTAACCCGAAGTGTTTTCTGAAATTAAATGCTTTTTGTTTCTGATGTTTGATTTTGGAGCTCTATTCGTATATTCTTGCTTCGTGTCTTGTTAACTTTGAATGCTTTGAAAAGTATGCTCAAATCAGTGGTGATTGCTTGCTATTGATTTCAAGGTTTGTTGCCTGTGTTTATTTTTTAGTATGAGTAACGCTTTTCCTTTTTGTTCTTCATCTTGGTGACGTGACCTTTGTAGGATTATGCTTAACACCTAGACCATAGAAGCTTAAAGACCTGGGAATGTGGAAGCTGTTAATAATTTGACTTTTTTATTTAAGAGTTCTGATGTTGAAATCAACAGTTATTTGGTATAGTGTCTGGCAACTATGCTGCTCAATGTCTGTGGGTCCATCAGAAAATGGTATTGTCTAGGATTGAATCCTTAACTGAATGCCCATCTTAGTTGTGACCTCTCCTCTCGTCTACTGAAATTGTTACAACCTAAACCTGCAGTTATGCAATGAGTGGCAACATATGCTGTTTGGTATGTGTGGCAAATGTACCAGTACCAAGTTACTAACTATTGTTGTTTTATGTTTCTGCTTGGGATGTGTTAGAATACCTTTGTACAAAGGTGGTATAGGATCTTAAATTTGGACAACCTACATGCATATTACTCTTGTCATGTTTGCTGGGTGGATCCCTTCTGAATTTGTTCAATCAATTGTGTCAATTCTTCAATGTCCTTGATTTGCTGCATCCCAAAAGCATAGGTGTCCTGGGGAAGATTTAGGTCACAAGTCATGTACATTTCTCTTGAAATTGGGCAGAAGCTTGACTAAGGCTGCAATGAGCATTCTAAAGATTTTACTCTGGCACCTATTTAGTACTGCACCTTTAAGTTTTATTAAAGGTTTTGATGTTTCATGACCCTAGAGATATTTGTTGTTCCTTTGCAAAGCAACATGAATTGAGTACAGATGCCCTGTTCTTATGTTCTGAATGTATCTCAACTTACATCAATAATATACTAAAGTCTGACTTCATTTTTCAATTTGTATGTTAAACTTCCAATTCAATGTGCAGGTTCTTCTTTGCCTCTGGATTGCTTACACTCACCAAGTGGAAGTTTTTCAGTCCAGTTTCTGTTGATTGTTGAAAAAAGTTATTCAATTTTGCAGTTGTGTAGAAGTGCTCTGTTTTCCCCCACTGGATATGGTAATTCTTGGCCTATTGCACATCACATCATATACTTTAATGACCCACCCTGGAGACTGGAGAGGTATACTTGTGTACAGAGGGATGTGGTTATGCTATCAGTTTGAAGGTGTACTTGTGAACAATTTTTAGTTAGATTTCCTGAGCATGGAAGTCTGTTGGCGAGGGAGAGAATAAAGACGATACAGGAGAGAGGGCAAAGGACTCAGGCTTGTAGTTGACAGACCATGCCTCCATTCCAAAAGATTTAGAACTCTGTATATAACTTTTTGAATGCATTACGTTCCCTTTAACTTCGGCTTCAGGAGTGACTGGGTGCAAAAGAAACAGTTAGGAAGAATATATTTTCACACCTTTATCTCCTGGTTTGCTTGCTCGATTTTATGAATGGTTTTGATGTAGAATATGTTTAATTAAGATACAAACAGCTAATGATGCTTTGATGCTCGGATGAAAAACAATTTCTCATTCTGTCTACTGCTGTACCCCATTAATGGTGCATACCTTTCAATTTGATTCAGGCCACTAATGAAAATCTTCCACCAAATGTTATTAAGCAACTTGCAAAGGAGTTGAAGAGCCTTGATGAATCCCCCCCTGAAGGCATAAAAGTAGTTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGGTATGTCATTTATCCCTTTTTTAAATGAAGTTCATCTCGTTGACATGGAGCTCACTTTTCTTACTGCATTGTGATTGTTTCACTTGCAGTGGGGACTCCCTACGAAAATGGTCTCTTCCGCATGAAGTTGATATTGTCCCGTGATTTCCCATGTTCTCCTCCCAAAGGTTTGCTCTGATAATGATTTGGTATAATTTGTGAATTAACAGCTTTAGCCTATAGCTGAATTCAATTTGTGGACCATATTTATCTGAGGATCTAATCTGTATGATTAGACGATAAATTGAATTTATACTTCTCCTAGATCCTATTACCTCATCTTTTATTAATTTCTTTATAGGTTACTTCCTTACAAAGATCTTTCATCCGAACATTGCAACCAATGGCGAGATTTGCGTCAACACTTTAAAGAAGGATTGGAATCCAAGCCTCGGACTGCGACATGTTTTAACTGTAATTACTTTTTCAAATTTGTGGCCACTATCATGTTTCTTGCCTGATATCCTCATTGACTGAAGAGAACTGTTTTTACAAATGCTTTAGTACATTGAATTCAGTTTAATATGTTTTGTTCGTTTCAGAATCTAAATAGGTGTTATGTTGAACAGGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAGTATGCCAGACATGCCAGGTTAGTCAGGCCCCTCTCCAAATTATCTGTTTTATCAATATAAGGTGATAAGAAACGCTGGAATGGTTATTATTGTTTATTTAGATAGAATTCAGTTGATTTTATTGGTGCACTCATTTGATGTTTTGGAAACGATTTTATTGTTCGACTCTATTTTTGAAATTTATGTTGGTTTCCACCCAATTTTGTTATTCTTAGTATGGTTTTTAATTTGAACGCGAAGCTTACTTTATTTTTCAACACCCATGTGATGTTGGACCCAATAGTAACTATTCAAACTGAGATTGAACTTGCTCGACTATTGAAACGGCTAAAAGTCCTTTCAAAGTATTCGACTTCTAAAGCATTATGTGAAAAATTTTAGAATCCCTGGAAACCGTGCAAGAGCACTTAAGAAGAGGAGGCTTCTGTTGGAAGTGATTTTATTGTTTCTCTATTTTTGAAATTTATGTTGGTTTCCACCCAATTTTCTTATTCTCAGTATGGTTTTTAATTTGAACGCTAAGGTTAATTTATTTTCAAAAACCAAAATTGAAATAACTATTGAACCAAATCTGTCTGCTTTCTCACATCCACTCCTTTGTTCTATATTTGTTATTAAACATTTAATTTTCTAATAAATTGTAACGTCATCCTTTGAAAGATAAAAACGATGGTATGATCAAAATAACAAGCAGCCAACTTTCGTTTTGCTTTCCCAGGCTCTATACAGGAATCCATGCAAAGCCAAAGCCAAAATTCAAGACTGGAGCCATCTCTGAGTCAACAACCGCCCTCAATGTTGACCCAACGAATGCATCAGCACTTAGTACAGATCTGAAAAACGCATCTGCCACGGCATTGCCTTTGGCATGTCCAACTGCCAATTCTATTACCGTAGTGAGAAGTGGGCAGGAGCAGCAGCAGCCAAATGTTGTTACAGCACTAGCCTCGGAATCTGGAGTCGGAGGCTCCGGTGTGGGTGAAGCACCAGCAGCAATGGTGAAGAAGGAAAGTGGACACTTAAAAATGCAGCAGGTTGGGAAGAAGAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTGTTATTTTGAATTGAATTAAAAAATGGATGGTCAATTAATGGCGCAGGGCTTTATTAAGGTTAGCTCTCTTGTTCGATAAAAAGAAGGGAGCTTAGAAGAAAAAAAAATTAAGAATTTAGAATGGAGAGTTAAAACAGAAGTGTTATGCTGTGCAACCAACATGTAAGGAACACACTTTCATCAGCTGAATCACTCATGGAGTCGACTTCTTTCTTCAACATTTCCTTTTCCAGTTTTTAAAAATGTTGCATAAATTTCGCTTAGGTTTCCCTTAAATTACTATGGTCTTGAAAATACAATTTGATCATGGTCTTAATAACAATTTGTTTAATTGTTTTCTTAGGCTTTGGAATTGAAATGTATTGAAGAATACTAAAAATCTAAAGTGCATCAAGATTTAATCCATTTTAAATAAAATAGGTAAGGTTCAAAATTCTCACAC ATCATTTCAAGGAAAAGAGAAGCTTTTTTCTTTTCTCTCAATACTCTCATCGTCTCTGTTTCCTCCCATTCTTCTTCTTTCTTAGTTTGGTTCCTGAGAATAATCAGAGCCACCGAGAGTTTTCAAAGGTTCTTCTTTGCCTCTGGATTGCTTACACTCACCAAGTGGAAGTTTTTCAGTCCAGTTTCTGTTGATTGTTGAAAAAAGTTATTCAATTTTGCAGTTGTGTAGAAGTGCTCTGTTTTCCCCCACTGGATATGGCCACTAATGAAAATCTTCCACCAAATGTTATTAAGCAACTTGCAAAGGAGTTGAAGAGCCTTGATGAATCCCCCCCTGAAGGCATAAAAGTAGTTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGTGGGGACTCCCTACGAAAATGGTCTCTTCCGCATGAAGTTGATATTGTCCCGTGATTTCCCATGTTCTCCTCCCAAAGGTTACTTCCTTACAAAGATCTTTCATCCGAACATTGCAACCAATGGCGAGATTTGCGTCAACACTTTAAAGAAGGATTGGAATCCAAGCCTCGGACTGCGACATGTTTTAACTGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAGTATGCCAGACATGCCAGGCTCTATACAGGAATCCATGCAAAGCCAAAGCCAAAATTCAAGACTGGAGCCATCTCTGAGTCAACAACCGCCCTCAATGTTGACCCAACGAATGCATCAGCACTTAGTACAGATCTGAAAAACGCATCTGCCACGGCATTGCCTTTGGCATGTCCAACTGCCAATTCTATTACCGTAGTGAGAAGTGGGCAGGAGCAGCAGCAGCCAAATGTTGTTACAGCACTAGCCTCGGAATCTGGAGTCGGAGGCTCCGGTGTGGGTGAAGCACCAGCAGCAATGGTGAAGAAGGAAAGTGGACACTTAAAAATGCAGCAGGTTGGGAAGAAGAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTGTTATTTTGAATTGAATTAAAAAATGGATGGTCAATTAATGGCGCAGGGCTTTATTAAGGTTAGCTCTCTTGTTCGATAAAAAGAAGGGAGCTTAGAAGAAAAAAAAATTAAGAATTTAGAATGGAGAGTTAAAACAGAAGTGTTATGCTGTGCAACCAACATGTAAGGAACACACTTTCATCAGCTGAATCACTCATGGAGTCGACTTCTTTCTTCAACATTTCCTTTTCCAGTTTTTAAAAATGTTGCATAAATTTCGCTTAGGTTTCCCTTAAATTACTATGGTCTTGAAAATACAATTTGATCATGGTCTTAATAACAATTTGTTTAATTGTTTTCTTAGGCTTTGGAATTGAAATGTATTGAAGAATACTAAAAATCTAAAGTGCATCAAGATTTAATCCATTTTAAATAAAATAGGTAAGGTTCAAAATTCTCACAC ATGGCCACTAATGAAAATCTTCCACCAAATGTTATTAAGCAACTTGCAAAGGAGTTGAAGAGCCTTGATGAATCCCCCCCTGAAGGCATAAAAGTAGTTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGTGGGGACTCCCTACGAAAATGGTCTCTTCCGCATGAAGTTGATATTGTCCCGTGATTTCCCATGTTCTCCTCCCAAAGGTTACTTCCTTACAAAGATCTTTCATCCGAACATTGCAACCAATGGCGAGATTTGCGTCAACACTTTAAAGAAGGATTGGAATCCAAGCCTCGGACTGCGACATGTTTTAACTGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAAAATTATGATGAGTATGCCAGACATGCCAGGCTCTATACAGGAATCCATGCAAAGCCAAAGCCAAAATTCAAGACTGGAGCCATCTCTGAGTCAACAACCGCCCTCAATGTTGACCCAACGAATGCATCAGCACTTAGTACAGATCTGAAAAACGCATCTGCCACGGCATTGCCTTTGGCATGTCCAACTGCCAATTCTATTACCGTAGTGAGAAGTGGGCAGGAGCAGCAGCAGCCAAATGTTGTTACAGCACTAGCCTCGGAATCTGGAGTCGGAGGCTCCGGTGTGGGTGAAGCACCAGCAGCAATGGTGAAGAAGGAAAGTGGACACTTAAAAATGCAGCAGGTTGGGAAGAAGAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGA MATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGPVGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTNASALSTDLKNASATALPLACPTANSITVVRSGQEQQQPNVVTALASESGVGGSGVGEAPAAMVKKESGHLKMQQVGKKKIDARKKSLKRL* Homology
BLAST of CSPI04G17180 vs. ExPASy Swiss-Prot
Match: Q9FF66 (Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana OX=3702 GN=UBC22 PE=1 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.9e-99 Identity = 197/269 (73.23%), Postives = 213/269 (79.18%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy Swiss-Prot
Match: Q28F89 (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis OX=8364 GN=ube2s PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.1e-58 Identity = 99/152 (65.13%), Postives = 125/152 (82.24%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy Swiss-Prot
Match: C1C3R6 (Ubiquitin-conjugating enzyme E2 S OS=Lithobates catesbeianus OX=8400 GN=ube2s PE=2 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 8.1e-58 Identity = 99/151 (65.56%), Postives = 123/151 (81.46%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy Swiss-Prot
Match: Q8AVU2 (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis OX=8355 GN=ube2s-b PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.8e-57 Identity = 97/152 (63.82%), Postives = 124/152 (81.58%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy Swiss-Prot
Match: A7SE05 (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis OX=45351 GN=v1g237158 PE=3 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.8e-57 Identity = 98/152 (64.47%), Postives = 123/152 (80.92%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy TrEMBL
Match: A0A0A0L0F5 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G340550 PE=3 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146 Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy TrEMBL
Match: A0A1S3CLW5 (ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo OX=3656 GN=LOC103502453 PE=3 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 1.6e-141 Identity = 262/269 (97.40%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy TrEMBL
Match: A0A5A7VIJ3 (Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00920 PE=3 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 4.7e-141 Identity = 261/269 (97.03%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy TrEMBL
Match: A0A5D3BZH9 (Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00180 PE=3 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140 Identity = 260/269 (96.65%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of CSPI04G17180 vs. ExPASy TrEMBL
Match: A0A6J1EAT8 (ubiquitin-conjugating enzyme E2 22-like OS=Cucurbita moschata OX=3662 GN=LOC111432427 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.8e-125 Identity = 239/269 (88.85%), Postives = 244/269 (90.71%), Query Frame = 0
BLAST of CSPI04G17180 vs. NCBI nr
Match: XP_004142654.1 (ubiquitin-conjugating enzyme E2 22 [Cucumis sativus] >KGN54504.1 hypothetical protein Csa_011956 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 7.6e-146 Identity = 268/269 (99.63%), Postives = 268/269 (99.63%), Query Frame = 0
BLAST of CSPI04G17180 vs. NCBI nr
Match: XP_008464614.1 (PREDICTED: ubiquitin-conjugating enzyme E2 22 [Cucumis melo]) HSP 1 Score: 511.9 bits (1317), Expect = 3.3e-141 Identity = 262/269 (97.40%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CSPI04G17180 vs. NCBI nr
Match: KAA0067923.1 (ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa]) HSP 1 Score: 510.4 bits (1313), Expect = 9.7e-141 Identity = 261/269 (97.03%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CSPI04G17180 vs. NCBI nr
Match: TYK04292.1 (ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa]) HSP 1 Score: 508.4 bits (1308), Expect = 3.7e-140 Identity = 260/269 (96.65%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of CSPI04G17180 vs. NCBI nr
Match: XP_038881813.1 (ubiquitin-conjugating enzyme E2 22 [Benincasa hispida]) HSP 1 Score: 460.7 bits (1184), Expect = 8.8e-126 Identity = 243/269 (90.33%), Postives = 248/269 (92.19%), Query Frame = 0
BLAST of CSPI04G17180 vs. TAIR 10
Match: AT5G05080.1 (ubiquitin-conjugating enzyme 22 ) HSP 1 Score: 363.6 bits (932), Expect = 1.4e-100 Identity = 197/269 (73.23%), Postives = 213/269 (79.18%), Query Frame = 0
BLAST of CSPI04G17180 vs. TAIR 10
Match: AT5G05080.2 (ubiquitin-conjugating enzyme 22 ) HSP 1 Score: 363.6 bits (932), Expect = 1.4e-100 Identity = 197/269 (73.23%), Postives = 213/269 (79.18%), Query Frame = 0
BLAST of CSPI04G17180 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 ) HSP 1 Score: 109.0 bits (271), Expect = 6.0e-24 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of CSPI04G17180 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 ) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-24 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of CSPI04G17180 vs. TAIR 10
Match: AT1G14400.2 (ubiquitin carrier protein 1 ) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-24 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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