Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTATGCCATTATCTATTGGCTTTTTGAGAAAATATGGGGTAAAATTGAAATGTCTACGATAATGATTCTTGAGAATGAAGTTTTTTGTTTCCAATTTAGACATCCAAAATCTGTTGAGTGGATCTTATCTCGTGGATGGTGGCACCTTAAGGGCAAACATATGCTCCTCCGTACATGGACTCTAAGTTAGTCTCTGAATCCTTTGTTTTCAATTCTATTCCTAAATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGATAAATATCAGATTGGATGTTGTTGCTAGTGCTATAGGCAAACATCTATCTTTAGATCTAGCTACTAAGGAAAGACGAAAACTTTCATTTGCGCGAGTTTGTGTTGAATTAAATGTGGAGTCTCCTATGCTTGCTGAAATTACAGTTAACCTTAGGAGAGTGGATTTCATTGTGACTGTGAATTATGAATGGAAGCCTCGAAAATGTAATTTGTACCGTGCCTTTAGGCATTGTAGTGGTAAGTGCCCTAGGATTGTGGAGAATAAAGTACATCATGAGGAGGAAGTGAGGAAGGTAGTTTTTAACAAAGAGGATGATCTCAATAATGTGGCGTGTGGAGATGTGGTGTTTGAGTCATTTAAATAGTTGGAGGAAGGTGAGATTAATAGCTCCCTCATTAGGCCTACAAAGGAAAAGGGGGTGGGTAATCAGGATGATTTTACTCTTGTCATTGGGAAGAAATGGGAGTTGGTTTATGTTCGATATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAACCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCTTGTCTATAGTGGAAGGCTCCGCTCTTCCCTTACAAGTGGATGATACCACTATGGTTCTTAAGGGCATGCGCTCAGATGGTAATCCTGCGGGAACGAAGGCTTCTAATTCTTCTCATGATTAGTTAGTGTTCTTGGAATGTGAGGGGTCTAAATAGCGTTGTAAAGTGTAGAGCGGTGCTTAATTTTTTGGGTGTGTCTTCTGTGGGTTTCTGTTGTCTTTTGAAAACTAGAGTTCGGGAAGAAAACTTTGGTTTTATCTCCAATAGGTTTGGAAATTCGTGGGATTTCACTAGTAACTATAGTAGCAGTGAGATTGGTCGTATGTGGGTAATGTGGAAGAAGAGTCGCTTCGTTCTTACTCCTGGTGAGGAGGAAGATCAGTTTGTCTCTAGGTCATTAACTGATCTACTATCTGGGGATTGTGTAGAGGTACTGTGTGTTTATGCCTTTAATAATAATGTTGAGAGACGTTTGTTGTGGCGTCGTATGGGTGAGATCTCTTCTAGATGGACGAGGCCAAATGATGTCATTGGTGACTTTAATGCCATTAGGCTTCATTCTGAAGCTTTTGGTGGATCTTCTGTTACTGGTTATATAGAGGAGTTCGATATGGTCATTCGTGAGGCTGACCTAGTTGAACCATCAATACAGGGCAACTAG
mRNA sequence
ATGTCTTATGCCATTATCTATTGGCTTTTTGAGAAAATATGGGGGCAAACATATGCTCCTCCGTACATGGACTCTAAGTTAGTCTCTGAATCCTTTGTTTTCAATTCTATTCCTAAATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGATAAATATCAGATTGGATGTTGTTGCTAGTGCTATAGGCAAACATCTATCTTTAGATCTAGCTACTAAGGAAAGACGAAAACTTTCATTTGCGCGAGTTTGTGTTGAATTAAATGTGGAGTCTCCTATGCTTGCTGAAATTACAGTTAACCTTAGGAGAGTGGATTTCATTGTGACTGTGAATTATGAATGGAAGCCTCGAAAATGTAATTTGTACCGTGCCTTTAGGCATTGTAGTGGTAAGTGCCCTAGGATTGTGGAGAATAAAGTACATCATGAGGAGGAAGTGAGGAAGTTGGAGGAAGGTGAGATTAATAGCTCCCTCATTAGGCCTACAAAGGAAAAGGGGGTGGGTAATCAGGATGATTTTACTCTTGTCATTGGGAAGAAATGGGAGTTGGTTTATGTTCGATATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAACCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCTTGTCTATAGTGGAAGGCTCCGCTCTTCCCTTACAAGTGGATGATACCACTATGGTTCTTAAGGGCATGCGCTCAGATGGTAATCCTGCGGGAACGAAGGCTTCTAATTCTTCTCATGATTACGTTGTAAAGTGTAGAGCGGTGCTTAATTTTTTGGGTGTGTCTTCTGTGGGTTTCTGTTGTCTTTTGAAAACTAGAGTTCGGGAAGAAAACTTTGGTTTTATCTCCAATAGGTTTGGAAATTCGTGGGATTTCACTAGTAACTATAGTAGCAGTGAGATTGGTCGTATGTGGGTAATGTGGAAGAAGAGTCGCTTCGTTCTTACTCCTGGTGAGGAGGAAGATCAGTTTGTCTCTAGGTCATTAACTGATCTACTATCTGGGGATTGTGTAGAGGTACTGTGTGTTTATGCCTTTAATAATAATGTTGAGAGACGTTTGTTGTGGCGTCGTATGGGTGAGATCTCTTCTAGATGGACGAGGCCAAATGATGTCATTGGTGACTTTAATGCCATTAGGCTTCATTCTGAAGCTTTTGGTGGATCTTCTGTTACTGGTTATATAGAGGAGTTCGATATGGTCATTCGTGAGGCTGACCTAGTTGAACCATCAATACAGGGCAACTAG
Coding sequence (CDS)
ATGTCTTATGCCATTATCTATTGGCTTTTTGAGAAAATATGGGGGCAAACATATGCTCCTCCGTACATGGACTCTAAGTTAGTCTCTGAATCCTTTGTTTTCAATTCTATTCCTAAATGGATAAAACTTGGTAGGATTCCTATGGAGTTATGGATAAATATCAGATTGGATGTTGTTGCTAGTGCTATAGGCAAACATCTATCTTTAGATCTAGCTACTAAGGAAAGACGAAAACTTTCATTTGCGCGAGTTTGTGTTGAATTAAATGTGGAGTCTCCTATGCTTGCTGAAATTACAGTTAACCTTAGGAGAGTGGATTTCATTGTGACTGTGAATTATGAATGGAAGCCTCGAAAATGTAATTTGTACCGTGCCTTTAGGCATTGTAGTGGTAAGTGCCCTAGGATTGTGGAGAATAAAGTACATCATGAGGAGGAAGTGAGGAAGTTGGAGGAAGGTGAGATTAATAGCTCCCTCATTAGGCCTACAAAGGAAAAGGGGGTGGGTAATCAGGATGATTTTACTCTTGTCATTGGGAAGAAATGGGAGTTGGTTTATGTTCGATATAAGGGTAAAAGTGTGGATGTGACTATGCCTAACTCTTTTGGCAACCTTATGGAGTTGGGTAAGGGAGACAAGTGGGCCTTGTCTATAGTGGAAGGCTCCGCTCTTCCCTTACAAGTGGATGATACCACTATGGTTCTTAAGGGCATGCGCTCAGATGGTAATCCTGCGGGAACGAAGGCTTCTAATTCTTCTCATGATTACGTTGTAAAGTGTAGAGCGGTGCTTAATTTTTTGGGTGTGTCTTCTGTGGGTTTCTGTTGTCTTTTGAAAACTAGAGTTCGGGAAGAAAACTTTGGTTTTATCTCCAATAGGTTTGGAAATTCGTGGGATTTCACTAGTAACTATAGTAGCAGTGAGATTGGTCGTATGTGGGTAATGTGGAAGAAGAGTCGCTTCGTTCTTACTCCTGGTGAGGAGGAAGATCAGTTTGTCTCTAGGTCATTAACTGATCTACTATCTGGGGATTGTGTAGAGGTACTGTGTGTTTATGCCTTTAATAATAATGTTGAGAGACGTTTGTTGTGGCGTCGTATGGGTGAGATCTCTTCTAGATGGACGAGGCCAAATGATGTCATTGGTGACTTTAATGCCATTAGGCTTCATTCTGAAGCTTTTGGTGGATCTTCTGTTACTGGTTATATAGAGGAGTTCGATATGGTCATTCGTGAGGCTGACCTAGTTGAACCATCAATACAGGGCAACTAG
Protein sequence
MSYAIIYWLFEKIWGQTYAPPYMDSKLVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRKLEEGEINSSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN*
Homology
BLAST of CSPI04G16910 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 463.8 bits (1192), Expect = 7.9e-127
Identity = 239/423 (56.50%), Postives = 297/423 (70.21%), Query Frame = 0
Query: 27 LVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCV 86
+V ESFVFNS+P WI+LGRIPMELW L +VAS +GK ++LDLATKE +LS+ARVCV
Sbjct: 47 IVPESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCV 106
Query: 87 ELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEE 146
+L E M AEITVNLR VDF V+VNYEWKP+KCNL A H GKCPR VE+K+ EE
Sbjct: 107 KLEGEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEV 166
Query: 147 VRK------------------------LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGK 206
V K LEEGEI SS R EK VG +D+FTLV K
Sbjct: 167 VSKIIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRK 226
Query: 207 KWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRS 266
K ELV VR +GKS+ V MPNSFG+L+E+G DKWAL+++EGS PLQVD+ T VL ++S
Sbjct: 227 KSELVSVRDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKS 286
Query: 267 DGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDF 326
+AV +FLG SSVGFCCLL+TRVRE NF ++S RFGNSWD+
Sbjct: 287 --------------------KAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNSWDY 346
Query: 327 TSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVER 386
+ +YS+S +GR+WV+WKK+RF + ++QFV+ +LTDLLSG CVEV CVYA N+N+ER
Sbjct: 347 SCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSNIER 406
Query: 387 RLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSI 424
RLLWRR+ EI+S W+ P V+GDFNAIR+H EAFGGS + G +E+FD+ R+ADLVEPS+
Sbjct: 407 RLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEAFGGSPIQGEMEDFDLATRDADLVEPSV 449
BLAST of CSPI04G16910 vs. ExPASy TrEMBL
Match:
A0A5A7U3C2 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00410 PE=4 SV=1)
HSP 1 Score: 439.5 bits (1129), Expect = 1.6e-119
Identity = 227/397 (57.18%), Postives = 279/397 (70.28%), Query Frame = 0
Query: 48 MELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDF 107
M+LW L VVAS +GK +SLDLA K+R +LS+ARVC+EL S M AEITV+LR VDF
Sbjct: 1 MKLWTEAGLAVVASVVGKPISLDLANKKRHRLSYARVCIELEGGSNMPAEITVSLRGVDF 60
Query: 108 IVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRK------------------ 167
V+VNYEWKPRKCNL AF H KC R VE+K EE V K
Sbjct: 61 NVSVNYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEEVVHKGDGLDSEPCGEVVLESFK 120
Query: 168 -LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLM 227
LEEG+I SS R EKGVG DDFTLV KK ELV VR +GKS++V MPNSFG+L+
Sbjct: 121 QLEEGKIRSSPNRHNSQVEKGVGKSDDFTLVTRKKSELVSVRDRGKSMEVIMPNSFGSLL 180
Query: 228 ELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNF 287
E+G DKW LSI+EGS PLQVD+ T VL GM+S +AV++F
Sbjct: 181 EVGDADKWVLSIIEGSPPPLQVDEDTDVLSGMKS--------------------KAVVDF 240
Query: 288 LGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPG 347
LG SS+GFCCLL+TRVRE NF +S RFGNSWD++ +YS+S +GR+WVMWKK+RF +
Sbjct: 241 LGSSSMGFCCLLETRVREGNFASVSRRFGNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTH 300
Query: 348 EEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNA 407
++QFV+ +LTDLLSG CVEV CVYA N+N+ERRLLWRR+ EI+S W+ P V+GDFNA
Sbjct: 301 VMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSAWSNPGVVMGDFNA 360
Query: 408 IRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN 424
IR+HSEAFGGS + G +E+FD+ IR+ADL+EPS+QGN
Sbjct: 361 IRVHSEAFGGSPIQGEMEDFDLAIRDADLIEPSVQGN 377
BLAST of CSPI04G16910 vs. ExPASy TrEMBL
Match:
A0A5A7V084 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00100 PE=4 SV=1)
HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118
Identity = 228/410 (55.61%), Postives = 284/410 (69.27%), Query Frame = 0
Query: 37 IPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLA 96
+P WI+LGRIPMELW L VVASA+GK ++LDLATKERR+LS+ARVCV+L+ +S M A
Sbjct: 191 VPVWIRLGRIPMELWTEAGLAVVASAVGKPITLDLATKERRRLSYARVCVKLDGDSHMPA 250
Query: 97 EITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRK------- 156
EITV+LR VDFIV++NYEWKP KCNL F H GKC R VE+KV EE V K
Sbjct: 251 EITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPSKGD 310
Query: 157 -----------------LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGKKWELVYVRYK 216
LEEGEI SS R + EK VG +DDFTLV KK ELV+VR +
Sbjct: 311 GLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFVRDR 370
Query: 217 GKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKAS 276
GKS++VTMPN FG+L+E+G DKWAL+I++GS LQVD+ T VL G
Sbjct: 371 GKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLSALQVDEGTGVLSG------------- 430
Query: 277 NSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIG 336
VKC+ V +FLG SSVGFCCLL++R RE NF +S RFG SWD++ +YS+S +G
Sbjct: 431 -------VKCKVVFDFLGSSSVGFCCLLESRFRERNFESVSKRFGYSWDYSCSYSNSGVG 490
Query: 337 RMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEI 396
R+WVMWKK+RF + ++QFV +LTDLLS CVEV CVYA +N+ERRLLWRR+ EI
Sbjct: 491 RIWVMWKKNRFSFSTRMVDEQFVIGTLTDLLSDVCVEVFCVYASYSNIERRLLWRRLVEI 550
Query: 397 SSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSI 421
+S W+ P V+GDFN IR+HSEAFGGS G +E+FD+ I +ADL+EPS+
Sbjct: 551 TSGWSSPGVVMGDFNVIRVHSEAFGGSPNQGEMEDFDLTILDADLIEPSV 580
BLAST of CSPI04G16910 vs. ExPASy TrEMBL
Match:
A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1)
HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 209/380 (55.00%), Postives = 258/380 (67.89%), Query Frame = 0
Query: 65 KHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYR 124
K +SLD ATK+RR+LS+ARVCVEL S M AEITV+LR VDF V+VNYEWKPRKCNL
Sbjct: 256 KPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWKPRKCNLCC 315
Query: 125 AFRHCSGKCPRIVENKVHHEEEVRK-------------------LEEGEINSSLIRPTK- 184
AF H S KC R VE+K EE V K +E+GEI SS R
Sbjct: 316 AFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQVEKGEIRSSPNRHDSQ 375
Query: 185 -EKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSA 244
EKGVG D+FTLV KK ELV +R +GKS++V MPNSFG+L+E+G DKWALSI+EGS+
Sbjct: 376 VEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGDADKWALSIIEGSS 435
Query: 245 LPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVR 304
PLQVD+ T VL G+ S S VGFCCLL+TRVR
Sbjct: 436 PPLQVDEGTDVLSGISS-----------------------------SIVGFCCLLETRVR 495
Query: 305 EENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSG 364
E NF +S RF NSWD++ +YS+S +GR+WVMWKK+RF + ++QFV+ +LTDLLSG
Sbjct: 496 EGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTDLLSG 555
Query: 365 DCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYI 424
CVEV CVYA N+N+ERRLLW R+ EI+S W+ P V+ DFNAIR+HSEAF GS + G +
Sbjct: 556 VCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPIQGEM 606
BLAST of CSPI04G16910 vs. ExPASy TrEMBL
Match:
A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1)
HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-106
Identity = 209/380 (55.00%), Postives = 258/380 (67.89%), Query Frame = 0
Query: 65 KHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYR 124
K +SLD ATK+RR+LS+ARVCVEL S M AEITV+LR VDF V+VNYEWKPRKCNL
Sbjct: 256 KPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWKPRKCNLCC 315
Query: 125 AFRHCSGKCPRIVENKVHHEEEVRK-------------------LEEGEINSSLIRPTK- 184
AF H S KC R VE+K EE V K +E+GEI SS R
Sbjct: 316 AFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQVEKGEIRSSPNRHDSQ 375
Query: 185 -EKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSA 244
EKGVG D+FTLV KK ELV +R +GKS++V MPNSFG+L+E+G DKWALSI+EGS+
Sbjct: 376 VEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGDADKWALSIIEGSS 435
Query: 245 LPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVR 304
PLQVD+ T VL G+ S S VGFCCLL+TRVR
Sbjct: 436 PPLQVDEGTDVLSGISS-----------------------------SIVGFCCLLETRVR 495
Query: 305 EENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSG 364
E NF +S RF NSWD++ +YS+S +GR+WVMWKK+RF + ++QFV+ +LTDLLSG
Sbjct: 496 EGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTDLLSG 555
Query: 365 DCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYI 424
CVEV CVYA N+N+ERRLLW R+ EI+S W+ P V+ DFNAIR+HSEAF GS + G +
Sbjct: 556 VCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPIQGEM 606
BLAST of CSPI04G16910 vs. NCBI nr
Match:
XP_004142722.2 (uncharacterized protein LOC101204295 [Cucumis sativus])
HSP 1 Score: 721.5 bits (1861), Expect = 4.3e-204
Identity = 361/401 (90.02%), Postives = 361/401 (90.02%), Query Frame = 0
Query: 23 MDSKLVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFA 82
MDSKLVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFA
Sbjct: 1 MDSKLVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFA 60
Query: 83 RVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVH 142
RVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVH
Sbjct: 61 RVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVH 120
Query: 143 HEEEVRKLEEGEINSSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSF 202
HEEEVRKLEEGEINSSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSF
Sbjct: 121 HEEEVRKLEEGEINSSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSF 180
Query: 203 GNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRA 262
GNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSD
Sbjct: 181 GNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSD--------------------- 240
Query: 263 VLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFV 322
VREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFV
Sbjct: 241 -------------------VREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFV 300
Query: 323 LTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIG 382
LTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIG
Sbjct: 301 LTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIG 360
Query: 383 DFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN 424
DFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN
Sbjct: 361 DFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN 361
BLAST of CSPI04G16910 vs. NCBI nr
Match:
KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 463.8 bits (1192), Expect = 1.6e-126
Identity = 239/423 (56.50%), Postives = 297/423 (70.21%), Query Frame = 0
Query: 27 LVSESFVFNSIPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCV 86
+V ESFVFNS+P WI+LGRIPMELW L +VAS +GK ++LDLATKE +LS+ARVCV
Sbjct: 47 IVPESFVFNSVPVWIRLGRIPMELWTEAWLAIVASVVGKPITLDLATKEHSRLSYARVCV 106
Query: 87 ELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEE 146
+L E M AEITVNLR VDF V+VNYEWKP+KCNL A H GKCPR VE+K+ EE
Sbjct: 107 KLEGEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNLCCAIGHSGGKCPRSVESKIIQEEV 166
Query: 147 VRK------------------------LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGK 206
V K LEEGEI SS R EK VG +D+FTLV K
Sbjct: 167 VSKIIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSSPNRHGSHVEKEVGKRDEFTLVTRK 226
Query: 207 KWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRS 266
K ELV VR +GKS+ V MPNSFG+L+E+G DKWAL+++EGS PLQVD+ T VL ++S
Sbjct: 227 KSELVSVRDRGKSIVVAMPNSFGSLLEVGDVDKWALTVIEGSPPPLQVDEGTGVLSDLKS 286
Query: 267 DGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDF 326
+AV +FLG SSVGFCCLL+TRVRE NF ++S RFGNSWD+
Sbjct: 287 --------------------KAVSDFLGSSSVGFCCLLETRVRESNFDYVSRRFGNSWDY 346
Query: 327 TSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVER 386
+ +YS+S +GR+WV+WKK+RF + ++QFV+ +LTDLLSG CVEV CVYA N+N+ER
Sbjct: 347 SCSYSNSGVGRIWVVWKKNRFSFSTCVVDEQFVTGTLTDLLSGVCVEVFCVYASNSNIER 406
Query: 387 RLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSI 424
RLLWRR+ EI+S W+ P V+GDFNAIR+H EAFGGS + G +E+FD+ R+ADLVEPS+
Sbjct: 407 RLLWRRLVEITSCWSSPEVVMGDFNAIRVHFEAFGGSPIQGEMEDFDLATRDADLVEPSV 449
BLAST of CSPI04G16910 vs. NCBI nr
Match:
KAA0049770.1 (hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK12107.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 439.5 bits (1129), Expect = 3.3e-119
Identity = 227/397 (57.18%), Postives = 279/397 (70.28%), Query Frame = 0
Query: 48 MELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDF 107
M+LW L VVAS +GK +SLDLA K+R +LS+ARVC+EL S M AEITV+LR VDF
Sbjct: 1 MKLWTEAGLAVVASVVGKPISLDLANKKRHRLSYARVCIELEGGSNMPAEITVSLRGVDF 60
Query: 108 IVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRK------------------ 167
V+VNYEWKPRKCNL AF H KC R VE+K EE V K
Sbjct: 61 NVSVNYEWKPRKCNLCCAFGHSGSKCSRSVESKTIQEEVVHKGDGLDSEPCGEVVLESFK 120
Query: 168 -LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLM 227
LEEG+I SS R EKGVG DDFTLV KK ELV VR +GKS++V MPNSFG+L+
Sbjct: 121 QLEEGKIRSSPNRHNSQVEKGVGKSDDFTLVTRKKSELVSVRDRGKSMEVIMPNSFGSLL 180
Query: 228 ELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNF 287
E+G DKW LSI+EGS PLQVD+ T VL GM+S +AV++F
Sbjct: 181 EVGDADKWVLSIIEGSPPPLQVDEDTDVLSGMKS--------------------KAVVDF 240
Query: 288 LGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPG 347
LG SS+GFCCLL+TRVRE NF +S RFGNSWD++ +YS+S +GR+WVMWKK+RF +
Sbjct: 241 LGSSSMGFCCLLETRVREGNFASVSRRFGNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTH 300
Query: 348 EEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNA 407
++QFV+ +LTDLLSG CVEV CVYA N+N+ERRLLWRR+ EI+S W+ P V+GDFNA
Sbjct: 301 VMDEQFVTGTLTDLLSGVCVEVFCVYASNSNIERRLLWRRLVEITSAWSNPGVVMGDFNA 360
Query: 408 IRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSIQGN 424
IR+HSEAFGGS + G +E+FD+ IR+ADL+EPS+QGN
Sbjct: 361 IRVHSEAFGGSPIQGEMEDFDLAIRDADLIEPSVQGN 377
BLAST of CSPI04G16910 vs. NCBI nr
Match:
KAA0060724.1 (hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 436.0 bits (1120), Expect = 3.6e-118
Identity = 228/410 (55.61%), Postives = 284/410 (69.27%), Query Frame = 0
Query: 37 IPKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLA 96
+P WI+LGRIPMELW L VVASA+GK ++LDLATKERR+LS+ARVCV+L+ +S M A
Sbjct: 191 VPVWIRLGRIPMELWTEAGLAVVASAVGKPITLDLATKERRRLSYARVCVKLDGDSHMPA 250
Query: 97 EITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEEVRK------- 156
EITV+LR VDFIV++NYEWKP KCNL F H GKC R VE+KV EE V K
Sbjct: 251 EITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPSKGD 310
Query: 157 -----------------LEEGEINSSLIRPTK--EKGVGNQDDFTLVIGKKWELVYVRYK 216
LEEGEI SS R + EK VG +DDFTLV KK ELV+VR +
Sbjct: 311 GLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFVRDR 370
Query: 217 GKSVDVTMPNSFGNLMELGKGDKWALSIVEGSALPLQVDDTTMVLKGMRSDGNPAGTKAS 276
GKS++VTMPN FG+L+E+G DKWAL+I++GS LQVD+ T VL G
Sbjct: 371 GKSLEVTMPNFFGSLLEVGDFDKWALTIIDGSLSALQVDEGTGVLSG------------- 430
Query: 277 NSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVREENFGFISNRFGNSWDFTSNYSSSEIG 336
VKC+ V +FLG SSVGFCCLL++R RE NF +S RFG SWD++ +YS+S +G
Sbjct: 431 -------VKCKVVFDFLGSSSVGFCCLLESRFRERNFESVSKRFGYSWDYSCSYSNSGVG 490
Query: 337 RMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSGDCVEVLCVYAFNNNVERRLLWRRMGEI 396
R+WVMWKK+RF + ++QFV +LTDLLS CVEV CVYA +N+ERRLLWRR+ EI
Sbjct: 491 RIWVMWKKNRFSFSTRMVDEQFVIGTLTDLLSDVCVEVFCVYASYSNIERRLLWRRLVEI 550
Query: 397 SSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYIEEFDMVIREADLVEPSI 421
+S W+ P V+GDFN IR+HSEAFGGS G +E+FD+ I +ADL+EPS+
Sbjct: 551 TSGWSSPGVVMGDFNVIRVHSEAFGGSPNQGEMEDFDLTILDADLIEPSV 580
BLAST of CSPI04G16910 vs. NCBI nr
Match:
TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 395.2 bits (1014), Expect = 7.1e-106
Identity = 209/380 (55.00%), Postives = 258/380 (67.89%), Query Frame = 0
Query: 65 KHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKCNLYR 124
K +SLD ATK+RR+LS+ARVCVEL S M AEITV+LR VDF V+VNYEWKPRKCNL
Sbjct: 256 KPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWKPRKCNLCC 315
Query: 125 AFRHCSGKCPRIVENKVHHEEEVRK-------------------LEEGEINSSLIRPTK- 184
AF H S KC R VE+K EE V K +E+GEI SS R
Sbjct: 316 AFGHSSSKCSRSVESKTIQEEVVHKGDDVDFELCGEVVLESFKQVEKGEIRSSPNRHDSQ 375
Query: 185 -EKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWALSIVEGSA 244
EKGVG D+FTLV KK ELV +R +GKS++V MPNSFG+L+E+G DKWALSI+EGS+
Sbjct: 376 VEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGDADKWALSIIEGSS 435
Query: 245 LPLQVDDTTMVLKGMRSDGNPAGTKASNSSHDYVVKCRAVLNFLGVSSVGFCCLLKTRVR 304
PLQVD+ T VL G+ S S VGFCCLL+TRVR
Sbjct: 436 PPLQVDEGTDVLSGISS-----------------------------SIVGFCCLLETRVR 495
Query: 305 EENFGFISNRFGNSWDFTSNYSSSEIGRMWVMWKKSRFVLTPGEEEDQFVSRSLTDLLSG 364
E NF +S RF NSWD++ +YS+S +GR+WVMWKK+RF + ++QFV+ +LTDLLSG
Sbjct: 496 EGNFDSVSRRFSNSWDYSCSYSNSGVGRIWVMWKKNRFSFSTHVMDEQFVTGTLTDLLSG 555
Query: 365 DCVEVLCVYAFNNNVERRLLWRRMGEISSRWTRPNDVIGDFNAIRLHSEAFGGSSVTGYI 424
CVEV CVYA N+N+ERRLLW R+ EI+S W+ P V+ DFNAIR+HSEAF GS + G +
Sbjct: 556 VCVEVFCVYASNSNIERRLLWHRLVEITSAWSSPGVVMEDFNAIRVHSEAFRGSPIQGEM 606
BLAST of CSPI04G16910 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 58.2 bits (139), Expect = 1.9e-08
Identity = 49/184 (26.63%), Postives = 76/184 (41.30%), Query Frame = 0
Query: 38 PKWIKLGRIPMELWINIRLDVVASAIGKHLSLDLATKERRKLSFARVCVELNVESPMLAE 97
P W++L IP + L +A +G+ L +D+ T K FARVC+E+N+ P+
Sbjct: 165 PVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGT 224
Query: 98 ITVNLRRVDFIVTVNYEWKPRKCNLYRAFRHCSGKCPRIVENKVHHEEE-------VRKL 157
+ +N R V YE + C+ + H CPR V KV E V
Sbjct: 225 VLINGDR----YFVAYEGLSKICSSCGIYGHLVHSCPRNVVVKVSAGAETVTDRAVVPVG 284
Query: 158 EEGEINSSLIRPTKEKGVGNQDDFTLVIGKKW--ELVYVRYKGKSVDVTMPNSFGNLMEL 213
EG+ ++++ T + +G +R K+ V + N FG L
Sbjct: 285 MEGDDGFTVVQRTARRPAAPVQKMVFAVGASGGRSKQRLRELPKNQGVDLANRFGGLD-- 342
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V5J2 | 7.9e-127 | 56.50 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
A0A5A7U3C2 | 1.6e-119 | 57.18 | Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... | [more] |
A0A5A7V084 | 1.8e-118 | 55.61 | Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... | [more] |
A0A5A7SPE5 | 3.4e-106 | 55.00 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5D3DXE4 | 3.4e-106 | 55.00 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
Match Name | E-value | Identity | Description | |
XP_004142722.2 | 4.3e-204 | 90.02 | uncharacterized protein LOC101204295 [Cucumis sativus] | [more] |
KAA0062888.1 | 1.6e-126 | 56.50 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
KAA0049770.1 | 3.3e-119 | 57.18 | hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK1210... | [more] |
KAA0060724.1 | 3.6e-118 | 55.61 | hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466... | [more] |
TYK28099.1 | 7.1e-106 | 55.00 | uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT2G01050.1 | 1.9e-08 | 26.63 | zinc ion binding;nucleic acid binding | [more] |