CSPI04G16400 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G16400
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ACT domain-containing protein
Location	Chr4: 13734167 .. 13735971 (+)
RNA-Seq Expression	CSPI04G16400
Synteny	CSPI04G16400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAATTGGTAAAGCAAAAATAGGGGGCAAGTCCAATCACGTAAATATATTCAAGTAAGTACAAATTTTGAATTTCGTAAGTGAAACGACAGAGTACTCATGCAAAAAGGAAAATAAAATTATTTTTTTCTAAATTTAAAAAAAAAAATAAGAAGAAGAAGAGAAGAAAGAAAATAGAAAAATGCAAATATAAATAAAGAGAAAACTGGTGGTCTACTTTGTTTCAAGAAGCTTAGCTTTCAACAAGAGAAAGCAAGAACCTGCGGTGGCGCGTGAACGAGACACACGGCGGGGTTTGCAATAATAATAAACATCTCCGGTGGCCGTGAAATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCAGCAGCACCTAATTCTTCTCATCACAACTCTAAAGAATTTCGTGCTTCCACAAGCTCTACTGCTGTACTTCTCTCTTCATTCTATCATTCTATCATTCTATCATTCTTAATTCTTCACTTTCTTGATTTTTCAACTCCTTTTTTCTCAAATTCGATCCCTCCGGTATAAGTCGATCGAATCACGAGTTCCATTTGGTTTTCTCTATTCATCAATTTTTTTATTTATCACAAATTGAGAGTACCTGGATATTCTAACCATTATAGTTACTAATATATTTGTACATCAAATGAAATCTCTTTAGTTGCTTCGTCAATTGATTTTCTAATGATGATTCAACTATGAATTGGTGAGAAATTAATAAAATTTCTCATGTTTTTGTTGGGCAAAAACTGAAAATTTTAACTAAAACTCTCTTGGAAACATTAAAATAGAGAAGAGATTATATTATGTTGACTTTTCTTGCAGTAATATTGAATTTATTTATTAGAATCTACATTTATTAATAATGGAGAATTAATTAGTATCTGAATTCAAATTAATATAGTTGTTATTAATTTAATTAACCAATTTTTGAACATGTATGCAGGTGGTGAATGTGGAGAGTGTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCAGGATTGCTAGTTCGGATTCTAGAAGCCTTTGAGAAATTAGGACTTGGAGTCCTGGATGCCGATATATCTTGTTCCGATTGTTTCCAACTTCAAGCTTTTGGAGAAGAGGTCTCATCGCTCATAATCCTTGATTAAAAACATGTTACATTATTACATGTGAAAGTAACCAACATAAATAATAACATTTCTCCTTTTAAAATGCACATTTTTTTTTTCCTAATTGAAACTTGGATTCTTACCTTCATACCTACGATTTGTATCTTAAAACAATCGAACCAAAATCTTATTAATATAGATCATGATTACCTATGTTTTAAATGTATAATGTATCCAAATATTACTATGTTTCTCATCTCTACACTTATAAAACATTTGTTTTCATCTTATTTCTTTCCATCAGTAGGTTAAAGTAAATCAAAGTTAAAAGTATTTGGGAGAATATAATATTGAGTTTTGTTTTGTTTGTTTACAGAATGAAGGGAGAAAAATCATAAAGGCCCAGGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAAACATGAATTATATATCTATATATATAATTACAGTTATATTTATTTTTCTTCTCCTCTTTTTTCTTTTCTCCCAAACAGAACATCACTTCTGTGTATAGGGTAACCAAAATTTTCAACTCTCTTTCAAGTGTAGAATTTAAAATATCTTCAACCAAAAAACAAAAAAAACATGAAGTATTATTTCTTCCCAAAACCCTAAGAAGAAATTCAGAAATTTGTTCTTTTCTTTCC

mRNA sequence

AGAAATTGGTAAAGCAAAAATAGGGGGCAAGTCCAATCACGTAAATATATTCAAGTAAGTACAAATTTTGAATTTCGTAAGTGAAACGACAGAGTACTCATGCAAAAAGGAAAATAAAATTATTTTTTTCTAAATTTAAAAAAAAAAATAAGAAGAAGAAGAGAAGAAAGAAAATAGAAAAATGCAAATATAAATAAAGAGAAAACTGGTGGTCTACTTTGTTTCAAGAAGCTTAGCTTTCAACAAGAGAAAGCAAGAACCTGCGGTGGCGCGTGAACGAGACACACGGCGGGGTTTGCAATAATAATAAACATCTCCGGTGGCCGTGAAATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCAGCAGCACCTAATTCTTCTCATCACAACTCTAAAGAATTTCGTGCTTCCACAAGCTCTACTGCTGTGGTGAATGTGGAGAGTGTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCAGGATTGCTAGTTCGGATTCTAGAAGCCTTTGAGAAATTAGGACTTGGAGTCCTGGATGCCGATATATCTTGTTCCGATTGTTTCCAACTTCAAGCTTTTGGAGAAGAGAATGAAGGGAGAAAAATCATAAAGGCCCAGGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAAACATGAATTATATATCTATATATATAATTACAGTTATATTTATTTTTCTTCTCCTCTTTTTTCTTTTCTCCCAAACAGAACATCACTTCTGTGTATAGGGTAACCAAAATTTTCAACTCTCTTTCAAGTGTAGAATTTAAAATATCTTCAACCAAAAAACAAAAAAAACATGAAGTATTATTTCTTCCCAAAACCCTAAGAAGAAATTCAGAAATTTGTTCTTTTCTTTCC

Coding sequence (CDS)

ATGGGTTCTAGAGAGCGAAAGAAAGCAGCAGCAGCAGCACCTAATTCTTCTCATCACAACTCTAAAGAATTTCGTGCTTCCACAAGCTCTACTGCTGTGGTGAATGTGGAGAGTGTAGAGAGGGGTTTTCTAATAAATGTATTTTTGGAAAGAAATTCACCAGGATTGCTAGTTCGGATTCTAGAAGCCTTTGAGAAATTAGGACTTGGAGTCCTGGATGCCGATATATCTTGTTCCGATTGTTTCCAACTTCAAGCTTTTGGAGAAGAGAATGAAGGGAGAAAAATCATAAAGGCCCAGGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTGATGGGCAAACATGA

Protein sequence

MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRILEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT*

Homology

[Close]

BLAST of CSPI04G16400 vs. ExPASy TrEMBL
Match: A0A0A0L039 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.5e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT 120
           LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT 120

[Close]

BLAST of CSPI04G16400 vs. ExPASy TrEMBL
Match: A0A1S3CLI8 (uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.3e-53
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAAAA NSSHHNSKEFRASTSS+AVVNVESVERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAA-NSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGLGVLDADISCSDCFQLQA GEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 118

[Close]

BLAST of CSPI04G16400 vs. ExPASy TrEMBL
Match: A0A6J1IM47 (uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA++ N  HH SKEFRASTSS+AVVNVE +ERGFLINVF ERNSPGLLVRI
Sbjct: 1   MGSRERKKAAASSLN--HHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGL VLDAD+SCSDCFQLQA GEENEG KIIKAQVVKNAVKQAIKEWSES+GQ
Sbjct: 61  LEAFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQ 117

[Close]

BLAST of CSPI04G16400 vs. ExPASy TrEMBL
Match: A0A6J1GFJ5 (uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC111453491 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.3e-46
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA++ N  HH SKEFRASTSS+AVVNVE++ERGFLINVF ERNSPGLLV+I
Sbjct: 1   MGSRERKKAAASSLN--HHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGL VLDAD+SCSDCFQLQA GEENEG KIIKAQVVKNAVKQAIKEWSES+GQ
Sbjct: 61  LEAFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQ 117

[Close]

BLAST of CSPI04G16400 vs. ExPASy TrEMBL
Match: A0A6J1CQF9 (uncharacterized protein LOC111013797 OS=Momordica charantia OX=3673 GN=LOC111013797 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.5e-41
Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA++ N   H SKEFRASTSS+A VNVESVERGF+INV+LERNSPGLLVRI
Sbjct: 1   MGSRERKKAAASSQN---HKSKEFRASTSSSAEVNVESVERGFVINVYLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESD 118
           LE FEKLGL VLDA +SCSD FQLQA GEENEG KIIK QVVK AVKQAIKEWSES+
Sbjct: 61  LEVFEKLGLEVLDATVSCSDSFQLQAVGEENEGTKIIKPQVVKKAVKQAIKEWSESE 114

[Close]

BLAST of CSPI04G16400 vs. NCBI nr
Match: XP_004149926.1 (uncharacterized protein LOC101209807 [Cucumis sativus] >KGN54434.1 hypothetical protein Csa_012709 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT 120
           LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQT 120

[Close]

BLAST of CSPI04G16400 vs. NCBI nr
Match: XP_008464258.1 (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAAAA NSSHHNSKEFRASTSS+AVVNVESVERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAAAA-NSSHHNSKEFRASTSSSAVVNVESVERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGLGVLDADISCSDCFQLQA GEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ
Sbjct: 61  LEAFEKLGLGVLDADISCSDCFQLQAVGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 118

[Close]

BLAST of CSPI04G16400 vs. NCBI nr
Match: XP_038882922.1 (uncharacterized protein LOC120074022 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA    SSHH SKEFRASTSS+A+VNVES+ERGFLINVFLERNSPGLLVRI
Sbjct: 1   MGSRERKKAAA----SSHHKSKEFRASTSSSAMVNVESLERGFLINVFLERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGL VLDA++SCSDCFQLQA GEENEG KIIKAQVVKNAVKQAIKEWSES+GQ
Sbjct: 61  LEAFEKLGLEVLDANVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQ 115

[Close]

BLAST of CSPI04G16400 vs. NCBI nr
Match: XP_022977370.1 (uncharacterized protein LOC111477723 [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 3.1e-46
Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA++ N  HH SKEFRASTSS+AVVNVE +ERGFLINVF ERNSPGLLVRI
Sbjct: 1   MGSRERKKAAASSLN--HHKSKEFRASTSSSAVVNVEDLERGFLINVFSERNSPGLLVRI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGL VLDAD+SCSDCFQLQA GEENEG KIIKAQVVKNAVKQAIKEWSES+GQ
Sbjct: 61  LEAFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQ 117

[Close]

BLAST of CSPI04G16400 vs. NCBI nr
Match: XP_022950375.1 (uncharacterized protein LOC111453491 [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 6.9e-46
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MGSRERKKAAAAAPNSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRI 60
           MGSRERKKAAA++ N  HH SKEFRASTSS+AVVNVE++ERGFLINVF ERNSPGLLV+I
Sbjct: 1   MGSRERKKAAASSLN--HHKSKEFRASTSSSAVVNVENLERGFLINVFSERNSPGLLVQI 60

Query: 61  LEAFEKLGLGVLDADISCSDCFQLQAFGEENEGRKIIKAQVVKNAVKQAIKEWSESDGQ 120
           LEAFEKLGL VLDAD+SCSDCFQLQA GEENEG KIIKAQVVKNAVKQAIKEWSES+GQ
Sbjct: 61  LEAFEKLGLEVLDADVSCSDCFQLQAVGEENEGTKIIKAQVVKNAVKQAIKEWSESNGQ 117

[Close]

BLAST of CSPI04G16400 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-19
Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 31  TAVVNVESVERGFLINVFLERNSPGLLVRILEAFEKLGLGVLDADISCSDCFQLQAFGEE 90
           T +V VE++++GF+INVF  +N PG+LV +LEAFE +GL VL+A  SC+D F L A G E
Sbjct: 68  TPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLHAMGLE 127

Query: 91  NEGRKIIKAQVVKNAVKQAIKEWSE 116
           NE  + + A+ VK AV  AI+ W E
Sbjct: 128 NEDGENMDAEAVKQAVTDAIRSWGE 152

[Close]

BLAST of CSPI04G16400 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-17
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 15  NSSHHNSKEFRASTSSTAVVNVESVERGFLINVFLERNSPGLLVRILEAFEKLGLGVLDA 74
           N++  + + FR S+    +V VE++E+GF+I V   +N  G+LV +LE FE LGL V++A
Sbjct: 52  NNATTSEQSFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEA 111

Query: 75  DISCSDCFQLQAFG-EENEGRKIIKAQVVKNAVKQAIKEWSES 117
            +SC+D F L A G   N+    I A+ VK AV +AI+ WS+S
Sbjct: 112 RVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

The following BLAST results are available for this feature:

BLAST of CSPI04G16400 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G16400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L039	5.5e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329560 PE=4 SV=1	[more]
A0A1S3CLI8	6.3e-53	97.48	uncharacterized protein LOC103502184 OS=Cucumis melo OX=3656 GN=LOC103502184 PE=...	[more]
A0A6J1IM47	1.5e-46	87.39	uncharacterized protein LOC111477723 OS=Cucurbita maxima OX=3661 GN=LOC111477723...	[more]
A0A6J1GFJ5	3.3e-46	86.55	uncharacterized protein LOC111453491 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A6J1CQF9	5.5e-41	82.05	uncharacterized protein LOC111013797 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CSPI04G16400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149926.1	1.1e-56	100.00	uncharacterized protein LOC101209807 [Cucumis sativus] >KGN54434.1 hypothetical ...	[more]
XP_008464258.1	1.3e-52	97.48	PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]	[more]
XP_038882922.1	1.4e-46	88.24	uncharacterized protein LOC120074022 [Benincasa hispida]	[more]
XP_022977370.1	3.1e-46	87.39	uncharacterized protein LOC111477723 [Cucurbita maxima]	[more]
XP_022950375.1	6.9e-46	86.55	uncharacterized protein LOC111453491 [Cucurbita moschata]	[more]

BLAST of CSPI04G16400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40435.1	2.0e-19	51.76	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	2.5e-17	42.72	transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..31
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 32..92
None	No IPR available	PANTHER	PTHR31945:SF45	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 32..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G16400.1	CSPI04G16400.1	mRNA
CSPI04G16400.2	CSPI04G16400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding