CSPI04G16000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G16000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ERBB-3 BINDING PROTEIN 1-like
Location	Chr4: 13328915 .. 13329132 (+)
RNA-Seq Expression	CSPI04G16000
Synteny	CSPI04G16000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGCTGTTTTCTTGTGGCGTGTTTAATGACAGTTGATTGATGATGGATTTTTCTTACGGTAGTGATATGGGCTGCCGTATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAG

mRNA sequence

GATTGCTGTTTTCTTGTGGCGTGTTTAATGACAGTTGATTGATGATGGATTTTTCTTACGGTAGTGATATGGGCTGCCGTATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAG

Coding sequence (CDS)

ATGATGGATTTTTCTTACGGTAGTGATATGGGCTGCCGTATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAG

Protein sequence

MMDFSYGSDMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK

Homology

[Close]

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot
Match: M1CZC0 (ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum OX=4113 GN=EBP1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.8e-18
Identity = 45/51 (88.24%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVL EGPVTGRAADVIAA NTAAEV L LVRPGKK
Sbjct: 110 DMGCHIDGFIAVVGHTHVLHEGPVTGRAADVIAATNTAAEVALRLVRPGKK 160

[Close]

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot
Match: Q96327 (ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=EBP1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.6e-17
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIA+V HTHVLQEGP++GR ADVIAAANTAA+V L LVRPGKK
Sbjct: 111 DMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKK 161

[Close]

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot
Match: Q6AYD3 (Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 9.3e-07
Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVL---QEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           D+G  +DGFIA V HT V+   Q   VTGR ADVI AA+  AE  L LV+PG +
Sbjct: 109 DLGVHVDGFIANVAHTFVIGVAQGSQVTGRKADVIKAAHLCAEAALRLVKPGNQ 162

[Close]

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot
Match: P50580 (Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-06
Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVL---QEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           D+G  +DGFIA V HT V+   Q   VTGR ADVI AA+  AE  L LV+PG +
Sbjct: 109 DLGVHVDGFIANVAHTFVIGVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQ 162

[Close]

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot
Match: Q9UQ80 (Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 2.1e-06
Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVL---QEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           D+G  +DGFIA V HT V+   Q   VTGR ADVI AA+  AE  L LV+PG +
Sbjct: 109 DLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQ 162

[Close]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL
Match: A0A6I9QEQ4 (ERBB-3 BINDING PROTEIN 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034086 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 110 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 160

[Close]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL
Match: A0A4Y7LJV5 (Peptidase_M24 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_047311 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 112 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 162

[Close]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL
Match: A0A4Y7L583 (Peptidase_M24 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_003676 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 112 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 162

[Close]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL
Match: A0A2U1P0N8 (ERBB-3 BINDING PROTEIN 1 OS=Artemisia annua OX=35608 GN=CTI12_AA206670 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 185 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 235

[Close]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL
Match: A0A5D3E144 (ERBB-3 BINDING PROTEIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold669G00010 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 111 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 161

[Close]

BLAST of CSPI04G16000 vs. NCBI nr
Match: XP_031739584.1 (LOW QUALITY PROTEIN: ERBB-3 BINDING PROTEIN 1 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 3.0e-23
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MMDFSYGSDMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
          MMDFSYGSDMGC IDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK
Sbjct: 1  MMDFSYGSDMGCHIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 59

[Close]

BLAST of CSPI04G16000 vs. NCBI nr
Match: KAE8649565.1 (hypothetical protein Csa_017967 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 8  SDMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
          +DMGC IDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK
Sbjct: 22 NDMGCHIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 73

[Close]

BLAST of CSPI04G16000 vs. NCBI nr
Match: XP_020241277.1 (ERBB-3 BINDING PROTEIN 1 isoform X2 [Asparagus officinalis])

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9  DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
          DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 47 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 97

[Close]

BLAST of CSPI04G16000 vs. NCBI nr
Match: GEW02335.1 (ERBB-3 binding protein 1 [Tanacetum cinerariifolium])

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 64  DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 114

[Close]

BLAST of CSPI04G16000 vs. NCBI nr
Match: PWA79319.1 (ERBB-3 BINDING PROTEIN 1 [Artemisia annua])

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIAVV HTHVLQEGPVTGRAADVIAAANTAAEV L LVRPGKK
Sbjct: 185 DMGCHIDGFIAVVAHTHVLQEGPVTGRAADVIAAANTAAEVALRLVRPGKK 235

[Close]

BLAST of CSPI04G16000 vs. TAIR 10
Match: AT3G51800.1 (metallopeptidase M24 family protein )

HSP 1 Score: 87.0 bits (214), Expect = 5.4e-18
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIA+V HTHVLQEGP++GR ADVIAAANTAA+V L LVRPGKK
Sbjct: 111 DMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKK 161

[Close]

BLAST of CSPI04G16000 vs. TAIR 10
Match: AT3G51800.2 (metallopeptidase M24 family protein )

HSP 1 Score: 87.0 bits (214), Expect = 5.4e-18
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIA+V HTHVLQEGP++GR ADVIAAANTAA+V L LVRPGKK
Sbjct: 111 DMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKK 161

[Close]

BLAST of CSPI04G16000 vs. TAIR 10
Match: AT3G51800.3 (metallopeptidase M24 family protein )

HSP 1 Score: 87.0 bits (214), Expect = 5.4e-18
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 9   DMGCRIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKK 60
           DMGC IDGFIA+V HTHVLQEGP++GR ADVIAAANTAA+V L LVRPGKK
Sbjct: 111 DMGCHIDGFIALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKK 161

The following BLAST results are available for this feature:

BLAST of CSPI04G16000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M1CZC0	6.8e-18	88.24	ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum OX=4113 GN=EBP1 PE=2 SV=1	[more]
Q96327	7.6e-17	82.35	ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=EBP1 PE=1 SV=1	[more]
Q6AYD3	9.3e-07	53.70	Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1...	[more]
P50580	1.6e-06	53.70	Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=3	[more]
Q9UQ80	2.1e-06	53.70	Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3	[more]

BLAST of CSPI04G16000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6I9QEQ4	1.0e-16	92.16	ERBB-3 BINDING PROTEIN 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC1050340...	[more]
A0A4Y7LJV5	1.0e-16	92.16	Peptidase_M24 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_0...	[more]
A0A4Y7L583	1.0e-16	92.16	Peptidase_M24 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_0...	[more]
A0A2U1P0N8	1.0e-16	92.16	ERBB-3 BINDING PROTEIN 1 OS=Artemisia annua OX=35608 GN=CTI12_AA206670 PE=3 SV=1	[more]
A0A5D3E144	1.0e-16	92.16	ERBB-3 BINDING PROTEIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of CSPI04G16000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739584.1	3.0e-23	98.31	LOW QUALITY PROTEIN: ERBB-3 BINDING PROTEIN 1 [Cucumis sativus]	[more]
KAE8649565.1	2.3e-18	96.15	hypothetical protein Csa_017967 [Cucumis sativus]	[more]
XP_020241277.1	2.1e-16	92.16	ERBB-3 BINDING PROTEIN 1 isoform X2 [Asparagus officinalis]	[more]
GEW02335.1	2.1e-16	92.16	ERBB-3 binding protein 1 [Tanacetum cinerariifolium]	[more]
PWA79319.1	2.1e-16	92.16	ERBB-3 BINDING PROTEIN 1 [Artemisia annua]	[more]

BLAST of CSPI04G16000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51800.1	5.4e-18	82.35	metallopeptidase M24 family protein	[more]
AT3G51800.2	5.4e-18	82.35	metallopeptidase M24 family protein	[more]
AT3G51800.3	5.4e-18	82.35	metallopeptidase M24 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036005	Creatinase/aminopeptidase-like	GENE3D	3.90.230.10	Creatinase/methionine aminopeptidase superfamily	coord: 9..59 e-value: 1.2E-12 score: 49.5
IPR036005	Creatinase/aminopeptidase-like	SUPERFAMILY	55920	Creatinase/aminopeptidase	coord: 9..58
None	No IPR available	PANTHER	PTHR10804:SF135	ERBB-3 BINDING PROTEIN 1	coord: 9..59
None	No IPR available	PANTHER	PTHR10804	PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P	coord: 9..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G16000.1	CSPI04G16000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity