Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTATCAGAGATATCTGAGGAGGAAGAAGACGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCAAGTATCAGAAATCTGTGTATTCTTCTTCTTCTTCTTCTTTGTCTTCCTCTTCTAAATCATCTTGTAGAGGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTTTAGCCACTTATTTCCGTAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCCGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATGATTCTGGATCTCACACAACTAATTGCACATCAACTGGTTATTCCATAGACAGAAAGACAGGGCTTGGGAATAGCACAATAAGTGTTAGCAAACTCAAGTTAACTAGGAAAAAGTCGTTTCGGGAACTACCTAGATTTTGTTTGTTGTGGAGTAGCAAGCGATTTAGAGTCAGGTTCAGGTTAAGACGACTTAGAATTCTTATTTGTGGTAAACAATTCTAA
mRNA sequence
ATGCCAGTATCAGAGATATCTGAGGAGGAAGAAGACGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCAAGTATCAGAAATCTGTGTATTCTTCTTCTTCTTCTTCTTTGTCTTCCTCTTCTAAATCATCTTGTAGAGGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTTTAGCCACTTATTTCCGTAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCCGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATGATTCTGGATCTCACACAACTAATTGCACATCAACTGGTTATTCCATAGACAGAAAGACAGGGCTTGGGAATAGCACAATAAGTGTTAGCAAACTCAAGTTAACTAGGAAAAAGTCGTTTCGGGAACTACCTAGATTTTGTTTGTTGTGGAGTAGCAAGCGATTTAGAGTCAGGTTCAGGTTAAGACGACTTAGAATTCTTATTTGTGGTAAACAATTCTAA
Coding sequence (CDS)
ATGCCAGTATCAGAGATATCTGAGGAGGAAGAAGACGTACCTAGGTTTATTGACCCTGAAGTCCAAAAGGAAAGAATCCGACAAATACTCAAGTATCAGAAATCTGTGTATTCTTCTTCTTCTTCTTCTTTGTCTTCCTCTTCTAAATCATCTTGTAGAGGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTGAGGAGATTATTTGAGATGCAACATACTAGTTTAGCCACTTATTTCCGTAAGTACAGTGGATCACCTATGATAAAGTCAATTCCATTATGGGGCAGTGATTCCGATGTTGAAATCTTTGATGCTTGGGCATCCGTCAAGATTGGACTCTCACATGATTCTGGATCTCACACAACTAATTGCACATCAACTGGTTATTCCATAGACAGAAAGACAGGGCTTGGGAATAGCACAATAAGTGTTAGCAAACTCAAGTTAACTAGGAAAAAGTCGTTTCGGGAACTACCTAGATTTTGTTTGTTGTGGAGTAGCAAGCGATTTAGAGTCAGGTTCAGGTTAAGACGACTTAGAATTCTTATTTGTGGTAAACAATTCTAA
Protein sequence
MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRFRVRFRLRRLRILICGKQF*
Homology
BLAST of CSPI04G15810 vs. ExPASy TrEMBL
Match:
A0A0A0L1A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL
Sbjct: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
Query: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRFRVRFRL 180
SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFR+LPRFCLLWSSKRFRVRFRL
Sbjct: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRKLPRFCLLWSSKRFRVRFRL 180
Query: 181 RRLRILICGKQF 193
RRLRILICGKQF
Sbjct: 181 RRLRILICGKQF 192
BLAST of CSPI04G15810 vs. ExPASy TrEMBL
Match:
A0A6J1GDZ9 (uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)
HSP 1 Score: 269.6 bits (688), Expect = 9.9e-69
Identity = 151/195 (77.44%), Postives = 162/195 (83.08%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSK------SSCRG 60
M VSE++EEEE+V +FIDPEVQKERIRQILKYQKSVYSSSSSS SSSS SS R
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRF 180
IGLSHDS S TNCTS G +DR TGL NST+ V+K KLTRKKSFR+LP F LLW S RF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
Query: 181 RVRFRLRRLRILICG 190
RVR R RRLRI+ICG
Sbjct: 181 RVRIRWRRLRIMICG 195
BLAST of CSPI04G15810 vs. ExPASy TrEMBL
Match:
A0A6J1ISL5 (uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478319 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 6.0e-66
Identity = 147/191 (76.96%), Postives = 159/191 (83.25%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLS--SSSKSSCRGSSLL 60
M VSEI+EEEE+V +FIDPEVQ+ERIRQILKYQKSVYSSSSSS S S+S SS R SLL
Sbjct: 1 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60
Query: 61 DLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLS 120
DLMKAGN SLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+KIG S
Sbjct: 61 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120
Query: 121 HDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRFRVRF 180
HDS S TNCTS G +DR TGL NST+ V+K KLTRKKSFR+LP F LLW S RFRVR
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180
Query: 181 RLRRLRILICG 190
R R LRI+ICG
Sbjct: 181 RWRGLRIMICG 191
BLAST of CSPI04G15810 vs. ExPASy TrEMBL
Match:
A0A5D3BBH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00920 PE=4 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 3.3e-64
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
MPVSEI+EEEEDVPRFIDPEVQKERIRQIL+YQKSVY SSSS+SSSSKSSCR SSLLDL
Sbjct: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVY--SSSSMSSSSKSSCRSSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
MKAGNTSLRRLFEMQHTSLATYF KYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSH+
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHN 120
Query: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKL 154
SGSH T+CTS+G SIDRKTGLG+STI VSK +L
Sbjct: 121 SGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 151
BLAST of CSPI04G15810 vs. ExPASy TrEMBL
Match:
A0A6J1GDW9 (uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)
HSP 1 Score: 254.2 bits (648), Expect = 4.3e-64
Identity = 143/185 (77.30%), Postives = 153/185 (82.70%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSK------SSCRG 60
M VSE++EEEE+V +FIDPEVQKERIRQILKYQKSVYSSSSSS SSSS SS R
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRF 180
IGLSHDS S TNCTS G +DR TGL NST+ V+K KLTRKKSFR+LP F LLW S RF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
BLAST of CSPI04G15810 vs. NCBI nr
Match:
KGN54372.1 (hypothetical protein Csa_017974 [Cucumis sativus])
HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL
Sbjct: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
Query: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRFRVRFRL 180
SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFR+LPRFCLLWSSKRFRVRFRL
Sbjct: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRKLPRFCLLWSSKRFRVRFRL 180
Query: 181 RRLRILICGKQF 193
RRLRILICGKQF
Sbjct: 181 RRLRILICGKQF 192
BLAST of CSPI04G15810 vs. NCBI nr
Match:
XP_022950113.1 (uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata])
HSP 1 Score: 269.6 bits (688), Expect = 2.1e-68
Identity = 151/195 (77.44%), Postives = 162/195 (83.08%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSK------SSCRG 60
M VSE++EEEE+V +FIDPEVQKERIRQILKYQKSVYSSSSSS SSSS SS R
Sbjct: 1 MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60
Query: 61 SSLLDLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVK 120
SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+K
Sbjct: 61 CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120
Query: 121 IGLSHDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRF 180
IGLSHDS S TNCTS G +DR TGL NST+ V+K KLTRKKSFR+LP F LLW S RF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180
Query: 181 RVRFRLRRLRILICG 190
RVR R RRLRI+ICG
Sbjct: 181 RVRIRWRRLRIMICG 195
BLAST of CSPI04G15810 vs. NCBI nr
Match:
XP_023543295.1 (serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 262.7 bits (670), Expect = 2.5e-66
Identity = 149/199 (74.87%), Postives = 160/199 (80.40%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSK----------S 60
M VSEI+E+EE+V +FIDPEVQKERIRQILKYQKSVYSSSSSS SSSS S
Sbjct: 1 MSVSEITEDEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSSSSSISTSAS 60
Query: 61 SCRGSSLLDLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAW 120
S R SLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVE DAW
Sbjct: 61 SSRSCSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVETCDAW 120
Query: 121 ASVKIGLSHDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWS 180
AS+KIGLSHDS S TNCTS G +DR TG NST+ V+K KLTRKKSFR+LP F LLW
Sbjct: 121 ASIKIGLSHDSRSRGTNCTSNGIFMDRNTGPRNSTVRVNKHKLTRKKSFRKLPGFGLLWR 180
Query: 181 SKRFRVRFRLRRLRILICG 190
S RFRVR R RRLRI+ICG
Sbjct: 181 SGRFRVRIRWRRLRIMICG 199
BLAST of CSPI04G15810 vs. NCBI nr
Match:
XP_022978287.1 (uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978289.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima])
HSP 1 Score: 260.4 bits (664), Expect = 1.2e-65
Identity = 147/191 (76.96%), Postives = 159/191 (83.25%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLS--SSSKSSCRGSSLL 60
M VSEI+EEEE+V +FIDPEVQ+ERIRQILKYQKSVYSSSSSS S S+S SS R SLL
Sbjct: 1 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60
Query: 61 DLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLS 120
DLMKAGN SLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+KIG S
Sbjct: 61 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120
Query: 121 HDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRELPRFCLLWSSKRFRVRF 180
HDS S TNCTS G +DR TGL NST+ V+K KLTRKKSFR+LP F LLW S RFRVR
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180
Query: 181 RLRRLRILICG 190
R R LRI+ICG
Sbjct: 181 RWRGLRIMICG 191
BLAST of CSPI04G15810 vs. NCBI nr
Match:
KAA0045032.1 (hypothetical protein E6C27_scaffold30G00170 [Cucumis melo var. makuwa] >TYJ96294.1 hypothetical protein E5676_scaffold78209G00920 [Cucumis melo var. makuwa])
HSP 1 Score: 254.6 bits (649), Expect = 6.8e-64
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 0
Query: 1 MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLSSSSKSSCRGSSLLDL 60
MPVSEI+EEEEDVPRFIDPEVQKERIRQIL+YQKSVY SSSS+SSSSKSSCR SSLLDL
Sbjct: 1 MPVSEITEEEEDVPRFIDPEVQKERIRQILEYQKSVY--SSSSMSSSSKSSCRSSSLLDL 60
Query: 61 MKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHD 120
MKAGNTSLRRLFEMQHTSLATYF KYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSH+
Sbjct: 61 MKAGNTSLRRLFEMQHTSLATYFHKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLSHN 120
Query: 121 SGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKL 154
SGSH T+CTS+G SIDRKTGLG+STI VSK +L
Sbjct: 121 SGSHRTHCTSSGGSIDRKTGLGHSTIGVSKHRL 151
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L1A7 | 1.1e-96 | 99.48 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1 | [more] |
A0A6J1GDZ9 | 9.9e-69 | 77.44 | uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1ISL5 | 6.0e-66 | 76.96 | uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A5D3BBH5 | 3.3e-64 | 89.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1GDW9 | 4.3e-64 | 77.30 | uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
KGN54372.1 | 2.3e-96 | 99.48 | hypothetical protein Csa_017974 [Cucumis sativus] | [more] |
XP_022950113.1 | 2.1e-68 | 77.44 | uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata] | [more] |
XP_023543295.1 | 2.5e-66 | 74.87 | serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cuc... | [more] |
XP_022978287.1 | 1.2e-65 | 76.96 | uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288... | [more] |
KAA0045032.1 | 6.8e-64 | 89.54 | hypothetical protein E6C27_scaffold30G00170 [Cucumis melo var. makuwa] >TYJ96294... | [more] |
Match Name | E-value | Identity | Description | |