CSPI04G15190 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G15190
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	early nodulin-75-like
Location	Chr4: 12627719 .. 12628192 (-)
RNA-Seq Expression	CSPI04G15190
Synteny	CSPI04G15190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTTCATATGGTTATTACAGCCATGAATATCCTTATACTCATAAAAGATCATATCCTAAGTACAATGCAGCAGTTCCTTCTCCTCATCGTGCTCGTGACACTAGCTATCGTGAATATGAGGACTATTATCCTCATCGGCCTTCTCGTAATTATCAAGGATACCCCAAGTATGATGCACCAACATCAAAAGCTCCTCCTCCTCATCAATGTCGTCCTAGGCGTAGCTATCATGAATATAAGGATTATTATCCTTATACTTCTCGTAATTATCAAGGATACCCCAATAATTATGGCTATGCCGCCCATTACAGCGTTCCCGACTACCCTTATCAAAATTATGGATCGCCGACAAAGGCGTCGTCGGGATGTGGGGGAATGCTTCGAAAGTCAATGTTTGCTATTGTTGGAAGATTGATCGTTGGCGTGATATCTAGTTTTGTTCTTGGATTCCCTATTGGCCTGATCTAA

mRNA sequence

ATGAATAGTTCATATGGTTATTACAGCCATGAATATCCTTATACTCATAAAAGATCATATCCTAAGTACAATGCAGCAGTTCCTTCTCCTCATCGTGCTCGTGACACTAGCTATCGTGAATATGAGGACTATTATCCTCATCGGCCTTCTCGTAATTATCAAGGATACCCCAAGTATGATGCACCAACATCAAAAGCTCCTCCTCCTCATCAATGTCGTCCTAGGCGTAGCTATCATGAATATAAGGATTATTATCCTTATACTTCTCGTAATTATCAAGGATACCCCAATAATTATGGCTATGCCGCCCATTACAGCGTTCCCGACTACCCTTATCAAAATTATGGATCGCCGACAAAGGCGTCGTCGGGATGTGGGGGAATGCTTCGAAAGTCAATGTTTGCTATTGTTGGAAGATTGATCGTTGGCGTGATATCTAGTTTTGTTCTTGGATTCCCTATTGGCCTGATCTAA

Coding sequence (CDS)

ATGAATAGTTCATATGGTTATTACAGCCATGAATATCCTTATACTCATAAAAGATCATATCCTAAGTACAATGCAGCAGTTCCTTCTCCTCATCGTGCTCGTGACACTAGCTATCGTGAATATGAGGACTATTATCCTCATCGGCCTTCTCGTAATTATCAAGGATACCCCAAGTATGATGCACCAACATCAAAAGCTCCTCCTCCTCATCAATGTCGTCCTAGGCGTAGCTATCATGAATATAAGGATTATTATCCTTATACTTCTCGTAATTATCAAGGATACCCCAATAATTATGGCTATGCCGCCCATTACAGCGTTCCCGACTACCCTTATCAAAATTATGGATCGCCGACAAAGGCGTCGTCGGGATGTGGGGGAATGCTTCGAAAGTCAATGTTTGCTATTGTTGGAAGATTGATCGTTGGCGTGATATCTAGTTTTGTTCTTGGATTCCCTATTGGCCTGATCTAA

Protein sequence

MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQGYPKYDAPTSKAPPPHQCRPRRSYHEYKDYYPYTSRNYQGYPNNYGYAAHYSVPDYPYQNYGSPTKASSGCGGMLRKSMFAIVGRLIVGVISSFVLGFPIGLI*

Homology

[Close]

BLAST of CSPI04G15190 vs. ExPASy TrEMBL
Match: A0A5A7TUG4 (Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00850 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.2e-33
Identity = 84/137 (61.31%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQGYPKYD 60
           MN+ YGYYSH YPY HKRSYPKY AAVP    A  TSY EYEDYYP+ PSRNYQGYPKYD
Sbjct: 1   MNNPYGYYSHGYPYPHKRSYPKYKAAVPPRRPAGYTSYHEYEDYYPY-PSRNYQGYPKYD 60

Query: 61  APTSKAPPPHQCRPRRSYHEYKDYYPYTSRNYQGYPNNYGYAAHYSVPDYPY--QNYGSP 120
           APT+KAPPPHQC    SYHEY+DYYPY SRNYQGYP  Y      + P + Y  +  GS 
Sbjct: 61  APTTKAPPPHQC----SYHEYEDYYPYPSRNYQGYP-KYDAPTTKAPPSHQYRPKKEGSL 120

Query: 121 TKASSGCGGMLRKSMFA 136
           T   S   G +  S  +
Sbjct: 121 TSMLSSVAGSIGASFIS 131

[Close]

BLAST of CSPI04G15190 vs. ExPASy TrEMBL
Match: A0A1S3BP00 (early nodulin-75-like OS=Cucumis melo OX=3656 GN=LOC103491729 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.2e-33
Identity = 84/137 (61.31%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQGYPKYD 60
           MN+ YGYYSH YPY HKRSYPKY AAVP    A  TSY EYEDYYP+ PSRNYQGYPKYD
Sbjct: 1   MNNPYGYYSHGYPYPHKRSYPKYKAAVPPRRPAGYTSYHEYEDYYPY-PSRNYQGYPKYD 60

Query: 61  APTSKAPPPHQCRPRRSYHEYKDYYPYTSRNYQGYPNNYGYAAHYSVPDYPY--QNYGSP 120
           APT+KAPPPHQC    SYHEY+DYYPY SRNYQGYP  Y      + P + Y  +  GS 
Sbjct: 61  APTTKAPPPHQC----SYHEYEDYYPYPSRNYQGYP-KYDAPTTKAPPSHQYRPKKEGSL 120

Query: 121 TKASSGCGGMLRKSMFA 136
           T   S   G +  S  +
Sbjct: 121 TSMLSSVAGSIGASFIS 131

[Close]

BLAST of CSPI04G15190 vs. ExPASy TrEMBL
Match: A0A0A0KXB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297410 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.3e-28
Identity = 70/98 (71.43%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1  MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQG-YPKY 60
          MNS+YGY+S EY Y HKRSYPKY A V  PHRAR TSY EYEDYYPHR   NYQG YPKY
Sbjct: 6  MNSTYGYHSDEYIYPHKRSYPKYKAPVSRPHRARHTSYHEYEDYYPHRSPCNYQGRYPKY 65

Query: 61 DAPTSKAPPP-HQCRPRRSYHEYKDYYPYTSRNYQGYP 97
          DAP ++APPP HQC    SYHEY+DYYPY S  Y+GYP
Sbjct: 66 DAPPTRAPPPDHQC----SYHEYEDYYPYQSSLYEGYP 99

[Close]

BLAST of CSPI04G15190 vs. ExPASy TrEMBL
Match: A0A5D3DJC3 (Diacylglycerol kinase theta-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00860 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-10
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 92  YQGYPNNYGYAAHYSVPDYPYQNYGSPTKASSGCGGMLRKSMFAIVGRLIVGVISSFVLG 151
           + G+  +YGYAA YSVPDYPY+     T+ SSG GG L KSMFA+VGRL +GV+SSFV G
Sbjct: 237 HYGHYGHYGYAAPYSVPDYPYR---PATETSSGNGGKLGKSMFALVGRLTIGVMSSFVFG 296

Query: 152 FPI 155
           FPI
Sbjct: 297 FPI 296

[Close]

BLAST of CSPI04G15190 vs. ExPASy TrEMBL
Match: A0A1S4DX66 (uncharacterized protein LOC103490554 OS=Cucumis melo OX=3656 GN=LOC103490554 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-10
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 92  YQGYPNNYGYAAHYSVPDYPYQNYGSPTKASSGCGGMLRKSMFAIVGRLIVGVISSFVLG 151
           + G+  +YGYAA YSVPDYPY+     T+ SSG GG L KSMFA+VGRL +GV+SSFV G
Sbjct: 237 HYGHYGHYGYAAPYSVPDYPYR---PATETSSGNGGKLGKSMFALVGRLTIGVMSSFVFG 296

Query: 152 FPI 155
           FPI
Sbjct: 297 FPI 296

[Close]

BLAST of CSPI04G15190 vs. NCBI nr
Match: XP_008450016.1 (PREDICTED: early nodulin-75-like [Cucumis melo] >KAA0045161.1 early nodulin-75-like [Cucumis melo var. makuwa] >TYK23577.1 early nodulin-75-like [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 84/137 (61.31%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQGYPKYD 60
           MN+ YGYYSH YPY HKRSYPKY AAVP    A  TSY EYEDYYP+ PSRNYQGYPKYD
Sbjct: 1   MNNPYGYYSHGYPYPHKRSYPKYKAAVPPRRPAGYTSYHEYEDYYPY-PSRNYQGYPKYD 60

Query: 61  APTSKAPPPHQCRPRRSYHEYKDYYPYTSRNYQGYPNNYGYAAHYSVPDYPY--QNYGSP 120
           APT+KAPPPHQC    SYHEY+DYYPY SRNYQGYP  Y      + P + Y  +  GS 
Sbjct: 61  APTTKAPPPHQC----SYHEYEDYYPYPSRNYQGYP-KYDAPTTKAPPSHQYRPKKEGSL 120

Query: 121 TKASSGCGGMLRKSMFA 136
           T   S   G +  S  +
Sbjct: 121 TSMLSSVAGSIGASFIS 131

[Close]

BLAST of CSPI04G15190 vs. NCBI nr
Match: KAE8649547.1 (hypothetical protein Csa_018181 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 70/98 (71.43%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1   MNSSYGYYSHEYPYTHKRSYPKYNAAVPSPHRARDTSYREYEDYYPHRPSRNYQG-YPKY 60
           MNS+YGY+S EY Y HKRSYPKY A V  PHRAR TSY EYEDYYPHR   NYQG YPKY
Sbjct: 288 MNSTYGYHSDEYIYPHKRSYPKYKAPVSRPHRARHTSYHEYEDYYPHRSPCNYQGRYPKY 347

Query: 61  DAPTSKAPPP-HQCRPRRSYHEYKDYYPYTSRNYQGYP 97
           DAP ++APPP HQC    SYHEY+DYYPY S  Y+GYP
Sbjct: 348 DAPPTRAPPPDHQC----SYHEYEDYYPYQSSLYEGYP 381

[Close]

BLAST of CSPI04G15190 vs. NCBI nr
Match: XP_038883088.1 (uncharacterized protein LOC120074144 [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-11
Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 94  GYPNNYGYAAHYSVPDYP--YQNYGSPTKASSGCGGMLRKSMFAIVGRLIVGVISSFVLG 153
           GY  NYGYAA Y VPDYP  Y NYG+P  ASS  GG L KSMFA+VGRL VGV+SS + G
Sbjct: 233 GYYGNYGYAAPYVVPDYPSVYHNYGAP-PASSESGGKLGKSMFALVGRLTVGVMSSVIFG 292

Query: 154 FPIGL 157
           FPIGL
Sbjct: 293 FPIGL 296

[Close]

BLAST of CSPI04G15190 vs. NCBI nr
Match: XP_016900568.1 (PREDICTED: uncharacterized protein LOC103490554 [Cucumis melo] >TYK23578.1 diacylglycerol kinase theta-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 92  YQGYPNNYGYAAHYSVPDYPYQNYGSPTKASSGCGGMLRKSMFAIVGRLIVGVISSFVLG 151
           + G+  +YGYAA YSVPDYPY+     T+ SSG GG L KSMFA+VGRL +GV+SSFV G
Sbjct: 237 HYGHYGHYGYAAPYSVPDYPYR---PATETSSGNGGKLGKSMFALVGRLTIGVMSSFVFG 296

Query: 152 FPI 155
           FPI
Sbjct: 297 FPI 296

[Close]

BLAST of CSPI04G15190 vs. NCBI nr
Match: XP_004142190.1 (uncharacterized protein LOC101223041 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-09
Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 92  YQGYPNNYGYAAHYSVPDYPYQNYGSPTKASSGCGG-MLRKSMFAIVGRLIVGVISSFVL 151
           + G+  +YGYAA YSVPDY Y      T+ASSG GG  L KSMFA+VGRL VGV+SSFV 
Sbjct: 235 HYGHYGHYGYAAPYSVPDYSY----PATEASSGSGGKKLGKSMFALVGRLTVGVMSSFVF 294

Query: 152 GFPIG 156
           GFPIG
Sbjct: 295 GFPIG 295

The following BLAST results are available for this feature:

BLAST of CSPI04G15190 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G15190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUG4	7.2e-33	61.31	Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A1S3BP00	7.2e-33	61.31	early nodulin-75-like OS=Cucumis melo OX=3656 GN=LOC103491729 PE=4 SV=1	[more]
A0A0A0KXB0	5.3e-28	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297410 PE=4 SV=1	[more]
A0A5D3DJC3	5.0e-10	63.49	Diacylglycerol kinase theta-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DX66	5.0e-10	63.49	uncharacterized protein LOC103490554 OS=Cucumis melo OX=3656 GN=LOC103490554 PE=...	[more]

BLAST of CSPI04G15190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450016.1	1.5e-32	61.31	PREDICTED: early nodulin-75-like [Cucumis melo] >KAA0045161.1 early nodulin-75-l...	[more]
KAE8649547.1	1.1e-27	71.43	hypothetical protein Csa_018181 [Cucumis sativus]	[more]
XP_038883088.1	2.5e-11	69.23	uncharacterized protein LOC120074144 [Benincasa hispida]	[more]
XP_016900568.1	1.0e-09	63.49	PREDICTED: uncharacterized protein LOC103490554 [Cucumis melo] >TYK23578.1 diacy...	[more]
XP_004142190.1	8.8e-09	64.62	uncharacterized protein LOC101223041 [Cucumis sativus]	[more]

BLAST of CSPI04G15190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15190.1	CSPI04G15190.1	mRNA