CSPI04G15160 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G15160
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 12616295 .. 12616722 (-)
RNA-Seq ExpressionCSPI04G15160
SyntenyCSPI04G15160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGGTAGCCTTAACGAGGTTTTGATAGCGTATGAAATATCGCTATTCATTTTCGCTTAATTCGATTTCCATACGTGATTTTATGATATTACTTGATTTGTGTAATAGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

mRNA sequence

ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

Coding sequence (CDS)

ATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACAGATTGGGCCTGTATTGCAGGTACATATTGCAATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGATTTTGAGCAATTCGTGGTACAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

Protein sequence

MARLLISQVETVFEIEGDDERQQIGPVLQVHIAIDITKPLCQGVCIQVDFEQFVVQFEIDVILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL*
Homology
[Close]
BLAST of CSPI04G15160 vs. ExPASy TrEMBL
Match: A0A0A0L133 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297520 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MARLLISQVETVFEIEGDDERQQIGPVLQVHIAIDITKPLCQGVCIQVDFEQFVVQFEID 60
           MARLLISQVETVFEIEGDDERQ+IGPVLQVHIAIDITKPLCQGVCIQV         EID
Sbjct: 5   MARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLN-----EID 64

Query: 61  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 108
           VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 65  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

[Close]
BLAST of CSPI04G15160 vs. NCBI nr
Match: KGN54302.1 (hypothetical protein Csa_017874 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MARLLISQVETVFEIEGDDERQQIGPVLQVHIAIDITKPLCQGVCIQVDFEQFVVQFEID 60
           MARLLISQVETVFEIEGDDERQ+IGPVLQVHIAIDITKPLCQGVCIQV         EID
Sbjct: 5   MARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLN-----EID 64

Query: 61  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 108
           VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 65  VILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

The following BLAST results are available for this feature:
BLAST of CSPI04G15160 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G15160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1331.1e-4390.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297520 PE=4 SV=1[more]
BLAST of CSPI04G15160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54302.12.2e-4390.65hypothetical protein Csa_017874 [Cucumis sativus][more]
BLAST of CSPI04G15160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G15160.1CSPI04G15160.1mRNA