CSPI04G14430 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G14430
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Actin-depolymerizing factor
Location	Chr4: 12140621 .. 12142750 (+)
RNA-Seq Expression	CSPI04G14430
Synteny	CSPI04G14430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTTCCTTTAGTTTGGCTTTTTCTTTAAGCCGACTTCAACAAAAAGAAGGAAGTTCATCATCGTTTTCAATAGTGATTTTCACCAGCACGACACGCTCTTCTTCTCTGCTATTTGAATCACTGGCACCATAATTAACACTCTCAACCACCCAATATAACCTTCTTCCTCCTCCATTCATTCATTCCTCATTGCCGGACTAACACTTCCGATTTCTCTGTTTTTTGAGTTCTTCCGCTACCATCCAAGGAGAAAACATGGTAATCCCTTCCATTCTTTTGCTTCGTTTTTAGCTTTCCAAGTGTTTGATTACATGACCCATTTGGTTGTTTTGAAGTTTGCTGCTACAGATGGGTTTCTGGTCATTTTTCAAGATTATCCTTATTTCCTGAGGGGAAATGTGTTTTTGGTGTTTAGCTTCTCTTTTTTTGGTTCATCTTGGTGTTTAATCTGTGATGTGATTAAGGGGTGTATTTGAATTGATTGGAGTTATTTGAACGTGTTTGGTTTTGGTTGATTTATAGTTCATGAATTGTTTTGGTGTCTAAAGTTTAGTTCTGAGATCTGGATAGCTGATCTGGTTTGTCTTGGAATGGATTTTTGTGATTGCAACAAGTGGATGATTTAGTCTAATGATCAATGGTGCAGACGGATTACAGAAACGGTTCCTACTTTTAGTAGTTTATTTATTTCCCTCTCAAAGGTCAAATCTACCTTTTGTAGTTGTATGGAGTTTTGTTGTTGCAATGATCTGAGTTTTGCATCATGAACTGAGAAATACTATCTGTACATGCACAAGTCATTTACTTTTGTGGCATTACAGAAACAGGAGAAGCTAAAAGAATATTTGAGTTTGAGTTGTGATTTTCATTTTCAATAACAAGATATTTCAATCAACAATCCTCGATTCTGTTAAGGAAGGAAAATCATTTTCACACATTTTCATTTGCTTACCTATAACTATAAGGCAAATGAAGGGGTTAAAAGGTGTGTGTTTTGGGGGTCAGTCAACCATCATTTTTATTGTATACTAATCGGTGATCAAATATCAGAAACTTAGCTTGACCATTTAGAATGATTCAAGTTTTTTCAATCCTAAGTGTGTTGATAAGAACACTCTTTTGTGAATCTGATAGGCCAATGCAGCATCAGGAATGGCTGTGAACGATGAATGTAAGTTAAAGTTTTTGGAGCTTAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTTGTTGTGGAGAAACTTGGTGGGCCTAGCCAGAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCAACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACGGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCCTGGTAATGACGACTCCTCTGTTTCTCCCCTTCATCCATTCAGTGTTTGCATTTTTCATTTGTTCACTAATTGAACCGTTAAATCATAAATGAAGGTCTCCTGATGATTCAAAGGTCAGAAGCAAGATGATATATGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCAACTGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGAACACAAACACAAGACTTTGGAAATGAATTGAAAGAGTTAAAGTTTGTGAGATGGAGGCTTAGATTTCACTGAAAATCTTCTGTTCTACTTGAACAAAGATGCAGCTGTGTGTCATCTACTTTCTCATGGTATTTCTTTTAACTAGTTATGCAACTCTTTTCTCTTGAGTGACCATCTGGAGTCTGATTATTACCTATAAAAGCTAATATTATGTAGCTTGAGTGAGGGGTTAGTATAAACCTTATGCTAATTTCTATTTTGTTCTATTTTTTCTTTTTTTTCAGCTTTACTTTGAATTTATGGCTTTTGAAGTTATGATGTATTTAATAACATACATTCTTTCTTCTTTAACCCAAACATTATCCTCTCTACTTTTGGGTTATTGTTATTTGGTTTGGCAGTTAGTAAAACTTGATTGCTTGATTCTTTCCTGGTAATGCTTTGGTGCCTATTGTGATTTTGATCAATCAAGTTTGCGTTCATT

mRNA sequence

GAATTTTCCTTTAGTTTGGCTTTTTCTTTAAGCCGACTTCAACAAAAAGAAGGAAGTTCATCATCGTTTTCAATAGTGATTTTCACCAGCACGACACGCTCTTCTTCTCTGCTATTTGAATCACTGGCACCATAATTAACACTCTCAACCACCCAATATAACCTTCTTCCTCCTCCATTCATTCATTCCTCATTGCCGGACTAACACTTCCGATTTCTCTGTTTTTTGAGTTCTTCCGCTACCATCCAAGGAGAAAACATGGCCAATGCAGCATCAGGAATGGCTGTGAACGATGAATGTAAGTTAAAGTTTTTGGAGCTTAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTTGTTGTGGAGAAACTTGGTGGGCCTAGCCAGAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCAACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACGGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCCTGGTCTCCTGATGATTCAAAGGTCAGAAGCAAGATGATATATGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCAACTGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGAACACAAACACAAGACTTTGGAAATGAATTGAAAGAGTTAAAGTTTGTGAGATGGAGGCTTAGATTTCACTGAAAATCTTCTGTTCTACTTGAACAAAGATGCAGCTGTGTGTCATCTACTTTCTCATGGTATTTCTTTTAACTAGTTATGCAACTCTTTTCTCTTGAGTGACCATCTGGAGTCTGATTATTACCTATAAAAGCTAATATTATGTAGCTTGAGTGAGGGGTTAGTATAAACCTTATGCTAATTTCTATTTTGTTCTATTTTTTCTTTTTTTTCAGCTTTACTTTGAATTTATGGCTTTTGAAGTTATGATGTATTTAATAACATACATTCTTTCTTCTTTAACCCAAACATTATCCTCTCTACTTTTGGGTTATTGTTATTTGGTTTGGCAGTTAGTAAAACTTGATTGCTTGATTCTTTCCTGGTAATGCTTTGGTGCCTATTGTGATTTTGATCAATCAAGTTTGCGTTCATT

Coding sequence (CDS)

ATGGCCAATGCAGCATCAGGAATGGCTGTGAACGATGAATGTAAGTTAAAGTTTTTGGAGCTTAAGTCGAAAAGAACTCATCGTTTCATTGTCTTTAAGATTGAGGAGAAGCTGAAGCAAGTTGTTGTGGAGAAACTTGGTGGGCCTAGCCAGAGTTATGAAGATTTTGCTGCTAGTCTCCCTGCCAACGAGTGTCGTTATGCTGTCTATGATTTCGACTTTGTCACGGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCCTGGTCTCCTGATGATTCAAAGGTCAGAAGCAAGATGATATATGCAAGCTCCAAGGACAGATTCAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACTGATCCAACTGAGATGGGTCTCGATGTCATTCGAAGCCGTGCCAACTGA

Protein sequence

MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLPANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRAN*

Homology

[Close]

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.7e-65
Identity = 121/139 (87.05%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           P NECRYAVYDFDFVT ENCQKSRIFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQA DPTEMGLDVI+SRAN
Sbjct: 121 LQACDPTEMGLDVIQSRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-63
Identity = 117/139 (84.17%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+DECKLKFLELK+KRT+RFI++KI+EK K VVVEK+G P  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PANECRYA++D+DFVTEENCQKS+IFFIAWSPD S+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTE+GLDVIR RAN
Sbjct: 121 LQATDPTEVGLDVIRGRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.4e-63
Identity = 118/139 (84.89%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA+YDFDFVT ENCQKS+IFFIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV RSRAN
Sbjct: 121 LQATDPTEMDLDVFRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-62
Identity = 117/138 (84.78%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELK+KRT+RFI++KIEEK K+VVVEKLG P++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDF+T+EN QKSRIFFIAWSPD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDV RSRA
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-62
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA+YDFDFVT ENCQKS+IFFIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV++SR N
Sbjct: 121 LQATDPTEMDLDVLKSRVN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL
Match: A0A0A0KX62 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL
Match: A0A1S3BHX2 (actin-depolymerizing factor 1-like OS=Cucumis melo OX=3656 GN=LOC103490039 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.9e-71
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PANECRYAVYDFDFVTEENCQKSRIFFIAW PDDSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWCPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL
Match: A0A5A7U187 (Actin-depolymerizing factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001770 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP
Sbjct: 7   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 66

Query: 62  ANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVEL 121
           ANECRYAVYDFDFVTEENCQKSRIFFIAW PDDSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 67  ANECRYAVYDFDFVTEENCQKSRIFFIAWCPDDSKVRSKMIYASSKDRFKRELDGIQVEL 126

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEMGLDVIRSRAN
Sbjct: 127 QATDPTEMGLDVIRSRAN 144

[Close]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL
Match: A0A6J1I5N8 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 135/139 (97.12%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL
Match: A0A6J1HFY8 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.5e-69
Identity = 133/139 (95.68%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLD+IRSRAN
Sbjct: 121 LQATDPTEMGLDIIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. NCBI nr
Match: XP_004142080.1 (actin-depolymerizing factor 1 [Cucumis sativus] >KGN54230.1 hypothetical protein Csa_018023 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.2e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. NCBI nr
Match: XP_008447631.1 (PREDICTED: actin-depolymerizing factor 1-like [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PANECRYAVYDFDFVTEENCQKSRIFFIAW PDDSKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWCPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. NCBI nr
Match: KAA0047351.1 (actin-depolymerizing factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 4.6e-70
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP
Sbjct: 7   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 66

Query: 62  ANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVEL 121
           ANECRYAVYDFDFVTEENCQKSRIFFIAW PDDSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 67  ANECRYAVYDFDFVTEENCQKSRIFFIAWCPDDSKVRSKMIYASSKDRFKRELDGIQVEL 126

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEMGLDVIRSRAN
Sbjct: 127 QATDPTEMGLDVIRSRAN 144

[Close]

BLAST of CSPI04G14430 vs. NCBI nr
Match: XP_038881189.1 (actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. NCBI nr
Match: XP_022972737.1 (actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 135/139 (97.12%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDVIRSRAN
Sbjct: 121 LQATDPTEMGLDVIRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-64
Identity = 118/139 (84.89%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA+YDFDFVT ENCQKS+IFFIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV RSRAN
Sbjct: 121 LQATDPTEMDLDVFRSRAN 139

[Close]

BLAST of CSPI04G14430 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 240.4 bits (612), Expect = 9.0e-64
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA+ECRYA+YDFDFVT ENCQKS+IFFIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEM LDV++SR N
Sbjct: 121 LQATDPTEMDLDVLKSRVN 139

[Close]

BLAST of CSPI04G14430 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-63
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAV+D+CKL+FLELK+KRTHRFIV+KIEEK KQVVVEK+G P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVEL 121
           A+ECRYA+YDFDFVT ENCQKS+IFFIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRAN 140
           QATDPTEM LDV RSRAN
Sbjct: 133 QATDPTEMDLDVFRSRAN 150

[Close]

BLAST of CSPI04G14430 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 231.9 bits (590), Expect = 3.2e-61
Identity = 113/139 (81.29%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKF+ELK+KRT R IV+KIE+  KQV+VEKLG P QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           PA++CRY +YDFDFVT ENCQKS+IFFIAWSPD +KVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDPTEMGLDV +SR N
Sbjct: 121 LQATDPTEMGLDVFKSRTN 137

[Close]

BLAST of CSPI04G14430 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-60
Identity = 105/139 (75.54%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MAN+ASGM VNDECK+KFLELK+KRT+RFIVFKI+EK +QV +EKLG P ++Y+DF +S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDF TE+NCQKS+IFFIAWSPD S+VRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAN 140
           LQATDP+EM LD+I+ R N
Sbjct: 121 LQATDPSEMSLDIIKGRLN 139

The following BLAST results are available for this feature:

BLAST of CSPI04G14430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI2	4.7e-65	87.05	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q0DLA3	1.5e-63	84.17	Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P...	[more]
Q39250	4.4e-63	84.89	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9FVI1	1.3e-62	84.78	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9ZSK3	1.3e-62	83.45	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]

BLAST of CSPI04G14430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX62	1.6e-71	100.00	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 ...	[more]
A0A1S3BHX2	5.9e-71	99.28	actin-depolymerizing factor 1-like OS=Cucumis melo OX=3656 GN=LOC103490039 PE=3 ...	[more]
A0A5A7U187	2.2e-70	99.28	Actin-depolymerizing factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1I5N8	1.5e-69	97.12	actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 P...	[more]
A0A6J1HFY8	2.5e-69	95.68	actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208...	[more]

BLAST of CSPI04G14430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142080.1	3.2e-71	100.00	actin-depolymerizing factor 1 [Cucumis sativus] >KGN54230.1 hypothetical protein...	[more]
XP_008447631.1	1.2e-70	99.28	PREDICTED: actin-depolymerizing factor 1-like [Cucumis melo]	[more]
KAA0047351.1	4.6e-70	99.28	actin-depolymerizing factor 1-like [Cucumis melo var. makuwa]	[more]
XP_038881189.1	1.0e-69	97.84	actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190....	[more]
XP_022972737.1	3.0e-69	97.12	actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depo...	[more]

BLAST of CSPI04G14430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	3.1e-64	84.89	actin depolymerizing factor 1	[more]
AT5G59890.1	9.0e-64	83.45	actin depolymerizing factor 4	[more]
AT3G46010.2	1.2e-63	84.78	actin depolymerizing factor 1	[more]
AT3G46000.1	3.2e-61	81.29	actin depolymerizing factor 2	[more]
AT4G00680.1	2.7e-60	75.54	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 1.3E-60 score: 217.4
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 1.3E-37 score: 128.3
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 7..139 score: 38.849709
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 6.8E-53 score: 180.7
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..139
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..139
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 1.15929E-66 score: 196.239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G14430.1	CSPI04G14430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding