CSPI04G14210 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G14210
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 11998254 .. 11998608 (-)
RNA-Seq ExpressionCSPI04G14210
SyntenyCSPI04G14210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTGGATGAACTCCGATTGATCGGACAGCTTGTTGAAGCAAAACGATCGGTAAAGAAATTGAGAAGAGAGATGAAAGGAATGGAAATTGAAAGTGACGGAAAAGGAAATAGAGATCGAAAAAAATGTAAGAGAATGAAAGAATGGAAGAAGAAGTCAATAGGAACCGCGTCCCAGTTCAACGCAATTCTTCTTCTATGAGGCAATAGCTCGATTCCTTTGCCAGCAATTTCGCTCCAAATTTTATAACGATTACCGGAAACGGTCCCTTTCAAATCACGCTACTTCCATTAATTGGGCCTCCCTATTTCTTGGGCCTAAATCTGAGCCCATTTCCTTTAACAAGCCCTAA

mRNA sequence

ATGCCGTTGGATGAACTCCGATTGATCGGACAGCTTGTTGAAGCAAAACGATCGGAACCGCGTCCCAGTTCAACGCAATTCTTCTTCTATGAGGCAATAGCTCGATTCCTTTGCCAGCAATTTCGCTCCAAATTTTATAACGATTACCGGAAACGGTCCCTTTCAAATCACGCTACTTCCATTAATTGGGCCTCCCTATTTCTTGGGCCTAAATCTGAGCCCATTTCCTTTAACAAGCCCTAA

Coding sequence (CDS)

ATGCCGTTGGATGAACTCCGATTGATCGGACAGCTTGTTGAAGCAAAACGATCGGAACCGCGTCCCAGTTCAACGCAATTCTTCTTCTATGAGGCAATAGCTCGATTCCTTTGCCAGCAATTTCGCTCCAAATTTTATAACGATTACCGGAAACGGTCCCTTTCAAATCACGCTACTTCCATTAATTGGGCCTCCCTATTTCTTGGGCCTAAATCTGAGCCCATTTCCTTTAACAAGCCCTAA

Protein sequence

MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATSINWASLFLGPKSEPISFNKP*
Homology
[Close]
BLAST of CSPI04G14210 vs. ExPASy TrEMBL
Match: A0A0A0KXD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293180 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.5e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS 60
          MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS
Sbjct: 1  MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS 60

Query: 61 INWASLFLGPKSEPISFNKP 81
          INWASLFLGPKSEPISFNKP
Sbjct: 61 INWASLFLGPKSEPISFNKP 80

[Close]
BLAST of CSPI04G14210 vs. NCBI nr
Match: KGN54208.1 (hypothetical protein Csa_018035 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS 60
          MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS
Sbjct: 1  MPLDELRLIGQLVEAKRSEPRPSSTQFFFYEAIARFLCQQFRSKFYNDYRKRSLSNHATS 60

Query: 61 INWASLFLGPKSEPISFNKP 81
          INWASLFLGPKSEPISFNKP
Sbjct: 61 INWASLFLGPKSEPISFNKP 80

The following BLAST results are available for this feature:
BLAST of CSPI04G14210 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G14210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXD46.5e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293180 PE=4 SV=1[more]
BLAST of CSPI04G14210 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54208.11.3e-37100.00hypothetical protein Csa_018035 [Cucumis sativus][more]
BLAST of CSPI04G14210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14210.1CSPI04G14210.1mRNA