CSPI04G02810 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAAAAGAAAAAGAAAAAAATCCTGATTTGTTAAGTTTGTTCATTGATAAATCTGAAGAAATTCTTGGTAATCTGAAGAAGAATTAGTCTCCATTTTTCTGATCCAAGATTCATTTGCGCCTCCCGGATCTTCCTCTCAGAAATGGTATTTTCCTTTCCTTTCCCTCCCCTTTTTGAATTATTTTTCTTCCTTTCCTTACCCTTGATTGTTTCCTCTCTAGGGTTTTTCTATTTGAGATATGATCATTGCTGATTTCGATTTGTGTCGGTTTATGATTTGATTGATGGGTTTTGTAGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTTGAGAAGAACATTTTGAAGAGAGGGGCTGTGCCTGAGACTGCTACAAAGAAGGGAAAAGATTACCCTGTTGGCCCTATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATGTGAGTTTTACATTCTGGAATGCTAATTTCTTCCTTTTCTCTTTCGTGTGCTTATGCTTATATTATGGCATTTTGTGGATTTTTGTTTTGTGATTACATTAGTCTATCTAGTAGGAGCCTGATATCTAGCCCTTCTTTGTAAATTCTCGTGAAGACCCAAACCCAAAGTTCGAGAATTTATGTACATATATATATATGCTACATGTGTAAATGTATTTGTAACCTTTGTTTCTAATGATGGGTAGAAAGAATTCATCCAGTGAAGGGAGTGCAGCACTGGGTCCAAAATTGTTTAGGATTGGATTTTATTGATAATTTTCTGGCTCACCAGATGGCCCACGAACGATTTTCATCTAAAATTTCTAAGAAGCATAAATGCTTTAGTTTTTTAGACTGGTTTTAGACACTTATTGATGCAATAAATATGTTAAACATGCATAGAACAACAGTTGTTGAACGACAACTAGATGACAATAATGATAGCTTTGAGAGTGAAATAGATGAAGCTATAGCATACAATCGCATCAACACATTTTATTTGATTTTCCTTGTCTTTTGGTATAAAATAATATATATTTAAAACATTTTATATTTTAATAAGCGTGACCTTGCTGTGTCTGTATTTTTCTTAGTAAAATCTTAAACGGTTGTTCATGAGGTTTATTTTGATGAAGTGAAGTGGTTTTTGGTTGTGTATCGGTGGGCTGATCGTGTGTTCCATTGTTGGAATTGTGCAGCTCTGTTTCAGATAATCAGGACGGCAACAGGTGGAGGAATGGGATGAGAGCCATCTTCAATTCGGATGAGAGGGGTAGCAGAAGAGGCAGGACATGAGGTTAAAACTTATTGAGTTAATTTGTTTGTACCCTCTGTTCTTTGCCTATTTGTCCTATCCTCTAGGAGAAGCTTAGAAAGTAAAGAGTAAGTAAGACCATTTATGGTCATCCTGTGAATTACTCTTATTATAAAAAAAGTAATTTAAATAACAGTGCACATGCCTAAGTGCTATGCTATATCCTATATCTAATCGTTTTGTTCATTGTTCATGTCACAATCTCTCAACTCTATAGGTGCACTTCCTTTTACTTGTGAGTTTGGAAAAAATATGCTTTCACTTTTGTTACCCTCTTTCAAGCACTTTTTACCTGTCTCATTCCAAGCCCAACCCAAGTATTTCATAGAAAAATTGCCATAAATACCGTGCATTTGTAGAGCTTTCAATTATAAACCAAACCAATGTGAAAAACAATTCTCCTCGTATTCATCCCTACTCTAGGCCCCATGTTTTACTTAAGATACATTGTTGGCCTAGTGATTATTAAAGGACTATGGTTCAATACAAAACGTAGACTGAATGGTGGCCAGCCTCCTAGGGGATGAATTTTCATGGCACCAAAATATTA CGAAAAAGAAAAAGAAAAAAATCCTGATTTGTTAAGTTTGTTCATTGATAAATCTGAAGAAATTCTTGGTAATCTGAAGAAGAATTAGTCTCCATTTTTCTGATCCAAGATTCATTTGCGCCTCCCGGATCTTCCTCTCAGAAATGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTTGAGAAGAACATTTTGAAGAGAGGGGCTGTGCCTGAGACTGCTACAAAGAAGGGAAAAGATTACCCTGTTGGCCCTATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACGGCAACAGGTGGAGGAATGGGATGAGAGCCATCTTCAATTCGGATGAGAGGGGTAGCAGAAGAGGCAGGACATGAGGTTAAAACTTATTGAGTTAATTTGTTTGTACCCTCTGTTCTTTGCCTATTTGTCCTATCCTCTAGGAGAAGCTTAGAAAGTAAAGAGTAAGTAAGACCATTTATGGTCATCCTGTGAATTACTCTTATTATAAAAAAAGTAATTTAAATAACAGTGCACATGCCTAAGTGCTATGCTATATCCTATATCTAATCGTTTTGTTCATTGTTCATGTCACAATCTCTCAACTCTATAGGTGCACTTCCTTTTACTTGTGAGTTTGGAAAAAATATGCTTTCACTTTTGTTACCCTCTTTCAAGCACTTTTTACCTGTCTCATTCCAAGCCCAACCCAAGTATTTCATAGAAAAATTGCCATAAATACCGTGCATTTGTAGAGCTTTCAATTATAAACCAAACCAATGTGAAAAACAATTCTCCTCGTATTCATCCCTACTCTAGGCCCCATGTTTTACTTAAGATACATTGTTGGCCTAGTGATTATTAAAGGACTATGGTTCAATACAAAACGTAGACTGAATGGTGGCCAGCCTCCTAGGGGATGAATTTTCATGGCACCAAAATATTA ATGACGACATCGCGGCGTCTTGCGGATCGGAAGGTGGAGAGGTTTGAGAAGAACATTTTGAAGAGAGGGGCTGTGCCTGAGACTGCTACAAAGAAGGGAAAAGATTACCCTGTTGGCCCTATTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACGGCAACAGGTGGAGGAATGGGATGA MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIRTATGGGMG* Homology
BLAST of CSPI04G02810 vs. ExPASy Swiss-Prot
Match: Q3T073 (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.3e-07 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy Swiss-Prot
Match: Q8N6R1 (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SERP2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.3e-07 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy Swiss-Prot
Match: Q6TAW2 (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Serp2 PE=3 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 6.3e-07 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy Swiss-Prot
Match: Q5REZ1 (Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SERP1 PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.7e-04 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy Swiss-Prot
Match: Q3ZBR1 (Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1 PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 6.6e-04 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy TrEMBL
Match: A0A0A0KYW0 (Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Csa_4G011630 PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 6.1e-29 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy TrEMBL
Match: A0A5A7SLR3 (Stress-associated endoplasmic reticulum protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00420 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy TrEMBL
Match: A0A6J1I9M5 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470902 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy TrEMBL
Match: A0A6J1IQU2 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479167 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. ExPASy TrEMBL
Match: A0A6J1F232 (stress-associated endoplasmic reticulum protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439082 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. NCBI nr
Match: XP_004152134.1 (stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN53016.1 hypothetical protein Csa_015278 [Cucumis sativus]) HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CSPI04G02810 vs. NCBI nr
Match: XP_038900855.1 (stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida]) HSP 1 Score: 133.7 bits (335), Expect = 6.3e-28 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CSPI04G02810 vs. NCBI nr
Match: KAA0025405.1 (stress-associated endoplasmic reticulum protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 131.7 bits (330), Expect = 2.4e-27 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. NCBI nr
Match: XP_022956326.1 (stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_022979456.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023526291.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6582010.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018433.1 Stress-associated endoplasmic reticulum protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.3 bits (329), Expect = 3.1e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. NCBI nr
Match: XP_022932563.1 (stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita moschata] >XP_022972333.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023538872.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6597676.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 3.1e-27 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CSPI04G02810 vs. TAIR 10
Match: AT1G27350.1 (Ribosome associated membrane protein RAMP4 ) HSP 1 Score: 123.6 bits (309), Expect = 6.1e-29 Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of CSPI04G02810 vs. TAIR 10
Match: AT1G27330.1 (Ribosome associated membrane protein RAMP4 ) HSP 1 Score: 123.6 bits (309), Expect = 6.1e-29 Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|