CSPI04G01770 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G01770
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Chr4: 993508 .. 994502 (+)
RNA-Seq Expression	CSPI04G01770
Synteny	CSPI04G01770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAACTTTAGTAAAATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGTATGCTGCATCTCTCTCTCCCTCTCTCTCACACATATTAAAATCACTTTCTCCAAAATCACTTCATTTTGTGTCACAATTTCATATTCATCAGTTGGGTTATTCTTATGATATATATGTAGAAAATTTTGTTTTAGCTTCTCAACAGTTTGTGACTCGTTTTCTATATTTAAAGAACCACAGTTTTCTTTCTATGAAAAAATATACTTCTTTAATACTGTTATTTCTTTGATAATCGAAGAAGATGGTAGAGACAAGTGCAGATTTGGATGGACTAAGTATTGTTCTATGTATATATTAAACATTTGAATAGGTTGAAAAACACGATGAATGTAACGTAAGATAAGATGTATCCAAATAATATTTTTGAAATAAAACTGAATCAGTTTGAAACAAAATTAATGTTAAAATTATTATTGAATTGTAAACGAATCAGGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATATGACGAAGCAGCCACGATTATGTGTTGTACTCCCAACAATCTCTCTACCAATCACAGCGCATCACATCATCCCTCGTCGGCACCGCTCTCGTCCAAGCTTCTAACTCCGACATCGATCGAGAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAGCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGACGGCGGTCACTGGCCAGAGAAAGCGGCCAGATGGGTCCCGAGCCGGGAGGTTGAGGAGGTGCGCCGGCTTGAAGATGAGCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATAATCATCATCATTTTGGTTCTACAAATAATTAG

mRNA sequence

ATTTAACTTTAGTAAAATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATATGACGAAGCAGCCACGATTATGTGTTGTACTCCCAACAATCTCTCTACCAATCACAGCGCATCACATCATCCCTCGTCGGCACCGCTCTCGTCCAAGCTTCTAACTCCGACATCGATCGAGAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAGCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGACGGCGGTCACTGGCCAGAGAAAGCGGCCAGATGGGTCCCGAGCCGGGAGGTTGAGGAGGTGCGCCGGCTTGAAGATGAGCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATAATCATCATCATTTTGGTTCTACAAATAATTAG

Coding sequence (CDS)

ATGGGAAGACCTCAACAACGCTATAGAGGAGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCTATACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCCGAAGACGCCGCCAGAGCATATGACGAAGCAGCCACGATTATGTGTTGTACTCCCAACAATCTCTCTACCAATCACAGCGCATCACATCATCCCTCGTCGGCACCGCTCTCGTCCAAGCTTCTAACTCCGACATCGATCGAGAAGTTGCAAAGATGTCGAATGGCTTCCCTCCAAATGACCAAAGCCCAATTCGCCGTCCGGAAATCCGCCGACCCAACTCAAAGTCCGGCCACCAAACTCGACGGCGGTCACTGGCCAGAGAAAGCGGCCAGATGGGTCCCGAGCCGGGAGGTTGAGGAGGTGCGCCGGCTTGAAGATGAGCACGTGGAGCAAATGATTCAAGAGTTGCTTGATCTTGGGTCCTTTGAGTTTTGCCCTAATAATAATAATAATCATCATCATTTTGGTTCTACAAATAATTAG

Protein sequence

MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKLDGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN*

Homology

[Close]

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-36
Identity = 93/176 (52.84%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA +MC     
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTK-------AQFAVRKSADPT 120
            +  ++ +  P+S   SSKLL+ T   KL +C MASLQMTK        Q A  +SAD  
Sbjct: 61  TNFPYNPNAIPTS---SSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSD 120

Query: 121 QSPATK--LDGGHWPEKAARWVP--SREVEEVRRLEDEHVEQMIQELLDLGSFEFC 166
              A +  L+ G       +W    +   +  R LE++H+EQMI+ELL  GS E C
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 69/101 (68.32%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRG RQRHWGSWVSEIRH ILKTRIW GTFE+AEDAARAYDEAA +MC T   
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTK 102
            +  ++ +   SS   SSKLL+ T I KL RC MASLQMT+
Sbjct: 61  TNFPYNPNASQSS---SSKLLSATLIAKLHRCYMASLQMTR 98

[Close]

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-18
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMC---------C 65
           +++RGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA +M           
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  TPNNL------STNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMT 101
             NN        T+ SAS   SS+  SS L +  S +  + C+  S  +T
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLT 114

[Close]

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-17
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTNH 65
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA +M     +  TN 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLM--NGQSAKTNF 64

Query: 66 SA--SHHPSSAPLSSKLLTPTSIEKLQRCRM 95
              S+  +S  ++S L +P S+ +L   ++
Sbjct: 65 PVIKSNGSNSLEINSALRSPKSLSELLNAKL 93

[Close]

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-16
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN- 65
           +++RGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA +M     N  TN 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLM--NGQNAKTNF 64

Query: 66  -----HSASHHPSSAPLSSKLLTPTSIEKL--QRCRMASLQMTKAQFAVRKSADPTQSPA 125
                   S H     ++S L++P S+ +L   + R +   +T +   +R   D +    
Sbjct: 65  PVVKSEEGSDHVKD--VNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI-- 124

Query: 126 TKLDGGHWPEKAA-----RWVPSREVEEV 142
                G W ++A       WV   E+  V
Sbjct: 125 -----GVWQKRAGSKTSPTWVMRLELGNV 142

[Close]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL
Match: A0A0A0KVJ4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120
           LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180
           DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180

[Close]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL
Match: A0A1S3BY29 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103494684 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.8e-86
Identity = 161/170 (94.71%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120
           LSTNHSA HHPS A  SSKLLTPT IEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNN 171
           +GGHWPEK ARWV SREVEEVRRLED+HVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL
Match: A0A6J1KDM8 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111492899 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61
Identity = 132/192 (68.75%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPTQ 120
           L TN +A  H  SAP  S LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P++
Sbjct: 61  LPTNRNAPLHSLSAPPPSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 SPATKLD------GGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNN 180
              T LD      G H+PE  A+WV   E +E+ RLED+HVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL
Match: A0A6J1GC95 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111452652 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.5e-61
Identity = 132/193 (68.39%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSASHHPSSA-PLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120
           L TNH+A  H  SA P SS LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120

Query: 121 QSPATKLDGG------HWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPN 180
           +   T  D G      H+PE  ++WV   E +E+ RLED+HVEQMIQELLDLGSFEFCPN
Sbjct: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180

[Close]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL
Match: A0A6J1DIX5 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111020953 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.1e-52
Identity = 116/174 (66.67%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQ +YRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQHKYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSASHHPSSAPLS----SKLLTPTSIEKLQRCRMASLQMTKAQFAVRKS-ADPTQS 120
           LS+NH+A    SS+  +    SKLLTPT I+KL++CRMAS QM K +   +   +D ++ 
Sbjct: 61  LSSNHNAPPQYSSSASTLGPVSKLLTPTLIDKLEKCRMASFQMAKKKLPTKTHLSDRSRR 120

Query: 121 PATKLDGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNN 170
           PA KLDGG         V S E +E  RLED+HVEQMIQELLDLGSF FCPNNN
Sbjct: 121 PAAKLDGG--------GVQSPETQEFHRLEDDHVEQMIQELLDLGSFHFCPNNN 165

[Close]

BLAST of CSPI04G01770 vs. NCBI nr
Match: XP_031740459.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hypothetical protein Csa_015366 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 3.0e-98
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120
           LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180
           DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN
Sbjct: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNNNHHHFGSTNN 180

[Close]

BLAST of CSPI04G01770 vs. NCBI nr
Match: XP_008454208.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 7.8e-86
Identity = 161/170 (94.71%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120
           LSTNHSA HHPS A  SSKLLTPT IEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL
Sbjct: 61  LSTNHSAPHHPSPASPSSKLLTPTLIEKLQRCRMASLQMTKAQFAVRKSADPTQSPATKL 120

Query: 121 DGGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNNNN 171
           +GGHWPEK ARWV SREVEEVRRLED+HVEQMIQELLDLGSFEFCPNNNN
Sbjct: 121 EGGHWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPNNNN 170

[Close]

BLAST of CSPI04G01770 vs. NCBI nr
Match: XP_022998174.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.3e-61
Identity = 132/192 (68.75%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPTQ 120
           L TN +A  H  SAP  S LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P++
Sbjct: 61  LPTNRNAPLHSLSAPPPSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 SPATKLD------GGHWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPNN 180
              T LD      G H+PE  A+WV   E +E+ RLED+HVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

[Close]

BLAST of CSPI04G01770 vs. NCBI nr
Match: XP_022949239.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 132/193 (68.39%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60

Query: 61  LSTNHSASHHPSSA-PLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120
           L TNH+A  H  SA P SS LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120

Query: 121 QSPATKLDGG------HWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPN 180
           +   T  D G      H+PE  ++WV   E +E+ RLED+HVEQMIQELLDLGSFEFCPN
Sbjct: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180

[Close]

BLAST of CSPI04G01770 vs. NCBI nr
Match: KAG7036532.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-60
Identity = 131/193 (67.88%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 81

Query: 61  LSTNHSASHHPSSA-PLSSKLLTPTSIEKLQRCRMASLQMTKAQ------FAVRKSADPT 120
           L TNH+A  H  SA P SS LLTPT IEKLQ+CR AS QM K Q      F+ RKSA P+
Sbjct: 82  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 141

Query: 121 QSPATKLDGG------HWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPN 180
           +   T  D G      H+PE  ++WV   + +E+ RLED+HVEQMIQELLDLGSFEFCPN
Sbjct: 142 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 201

[Close]

BLAST of CSPI04G01770 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-37
Identity = 93/176 (52.84%), Postives = 113/176 (64.20%), Query Frame = 0


Query: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60
           M RPQQR+RGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA +MC     
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  LSTNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMTK-------AQFAVRKSADPT 120
            +  ++ +  P+S   SSKLL+ T   KL +C MASLQMTK        Q A  +SAD  
Sbjct: 61  TNFPYNPNAIPTS---SSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSD 120

Query: 121 QSPATK--LDGGHWPEKAARWVP--SREVEEVRRLEDEHVEQMIQELLDLGSFEFC 166
              A +  L+ G       +W    +   +  R LE++H+EQMI+ELL  GS E C
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of CSPI04G01770 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.9e-19
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMC---------C 65
           +++RGVRQRHWGSWV+EIRHP+LK RIWLGTFETAE+AARAYDEAA +M           
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  TPNNL------STNHSASHHPSSAPLSSKLLTPTSIEKLQRCRMASLQMT 101
             NN        T+ SAS   SS+  SS L +  S +  + C+  S  +T
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLT 114

[Close]

BLAST of CSPI04G01770 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTNH 65
          +++RGVRQR WGSWVSEIRHP+LK R+WLGTF+TAE AARAYD+AA +M     +  TN 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLM--NGQSAKTNF 64

Query: 66 SA--SHHPSSAPLSSKLLTPTSIEKLQRCRM 95
              S+  +S  ++S L +P S+ +L   ++
Sbjct: 65 PVIKSNGSNSLEINSALRSPKSLSELLNAKL 93

[Close]

BLAST of CSPI04G01770 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTN- 65
           +++RGVRQR WGSWVSEIRHP+LK R+WLGTFETAE AARAYD+AA +M     N  TN 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLM--NGQNAKTNF 64

Query: 66  -----HSASHHPSSAPLSSKLLTPTSIEKL--QRCRMASLQMTKAQFAVRKSADPTQSPA 125
                   S H     ++S L++P S+ +L   + R +   +T +   +R   D +    
Sbjct: 65  PVVKSEEGSDHVKD--VNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI-- 124

Query: 126 TKLDGGHWPEKAA-----RWVPSREVEEV 142
                G W ++A       WV   E+  V
Sbjct: 125 -----GVWQKRAGSKTSPTWVMRLELGNV 142

[Close]

BLAST of CSPI04G01770 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNNLSTNH 65
          +++RGVRQR WGSWVSEIRHP+L   +WLGTF+TAE AARAYD+AA +M     +  TN 
Sbjct: 5  KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLM--NGQSAKTNF 64

Query: 66 SA--SHHPSSAPLSSKLLTPTSIEKLQRCRM 95
              S+  +S  ++S L +P S+ +L   ++
Sbjct: 65 PVIKSNGSNSLEINSALRSPKSLSELLNAKL 90

The following BLAST results are available for this feature:

BLAST of CSPI04G01770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	2.0e-36	52.84	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	9.1e-29	68.32	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	5.5e-18	50.00	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	3.6e-17	50.55	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	2.3e-16	39.60	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CSPI04G01770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVJ4	1.5e-98	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=...	[more]
A0A1S3BY29	3.8e-86	94.71	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1KDM8	1.1e-61	68.75	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GC95	5.5e-61	68.39	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1DIX5	2.1e-52	66.67	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]

BLAST of CSPI04G01770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740459.1	3.0e-98	100.00	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN52914.1 hy...	[more]
XP_008454208.1	7.8e-86	94.71	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_022998174.1	2.3e-61	68.75	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]
XP_022949239.1	1.1e-60	68.39	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
KAG7036532.1	2.5e-60	67.88	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CSPI04G01770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.4e-37	52.84	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.9e-19	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.5e-18	50.55	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.6e-17	39.60	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	1.2e-15	48.35	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 8..19 score: 66.97 coord: 30..46 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..72 e-value: 7.1E-29 score: 111.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..51 e-value: 2.3E-11 score: 43.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..51 score: 18.373243
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..55 e-value: 1.55441E-27 score: 96.5718
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 7.6E-21 score: 76.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..125
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..166
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..166
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G01770.1	CSPI04G01770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity