CSPI04G00800 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACTAAAGTTTGCTACTAAATTGTATAGTTGCACTCAAAACCCGAAACCAAGAATCCATCAGATTTTGGGAACTTCCACTCTGCCTTAGCGGTTCGAACCACACCAAACAGACACAAGGAGACTCCGATTCAGTGCTAACCTCAAGAGATTCAGAAGTATGGCGTCAGGGTGGGGAATCACCGGAAACAAGGGCCGATGCTACGATTTCTGGATTGATTTTAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTTCTCTACTCCGTGAAGATTACCTCGAGTGCCTTCACCATTTCAAGGAGGTAACACCTTCCATTTCCCTTAACTCTATATTGCTTCTGTTTTGTTTTTCTCCCAATCGTTCATGTATAGGTTAGATTGATTGCCCGAACCGGGATTAGATTTTTTGTTCCTCGTTCCTTTGAGCTTCTGTTGTCTAATTCGACCAGGGTTCTTGTTTTTGACATCGCATTCGAAGGGGGTTTAGTGAGATGTGGTTTAGATCTCGTTTTATATGTAATTTGTTGATTGACAAAATTTCTGGAGAGATTTGAATTCTCGGCTACTTGGATTTCTGTCGCTTTAGGTGATAGTGATCGATTAGGGAAGAAAGTCATAATCAGTTTAGGCATTCCTTCGGGGACATCAATCAGTATAGGCATTTCTGCTAACACATAATAGTGTGTTTATGTTACTGAACATAGATCTTTTCTATGAAGATTGCATCTATTTACACTTACAATAACAGCATTGAGTTCTGCGTTTGTTTTATTCCAAAAGAACAGGACAGAATAGTGGGATATGTTTTTGGTAAATTGAACATATAGATACTTACTTGTTAAAATAAAACAGGGCACCTTTATATTGTTGAAGAACGGGGATACAGCTTACCTATGATTTGTGAAGATTTGAATTTGTAAAAAGCCACTTAAACAACATCACGGGTTTCTAAGATTAACACAAGACTGTGATAAGCAGAACTGATTTTTGGGTTATGTGGCATCTTAATGGATGCTTGTGTTAGGCCTTGGAATCAATTTTATTAATCAACAAGAACTTGGGAAGGAATTAAGTGCTCCACTCTCTCCCAATTCTCTTAAGAGAACCCAAATACAAGATATTAACGAAAACCTACCTCACCCACTCAGCCAAACTGTATATATTATGGAAACGACTGCTTCATTGAAAAAAAAAAAAAAGAATACTAGGGTCTAGGGCATACAAAAAACCAAACCTACAAAAAAACCCCTCTAAAGAAGAAGTTTCTATGTAAGTAAGATGCTACCTAGCCAATCAATATATATCTATATATACTCAGCAACCCAAGTCCCTTGAACAAACAACTTTCTTTGGGACCTACACGCACACTACATTCTCTCTCACGTAACTGCACCTCTCTTCTTATGCCTACGAGAATAAACTCTCATAACTCGGGCCTATCAGCCTAGTAATGAATAACACAAGAATGTCATGTCTCTATATGGAAGAAAGCAACTTTAGTTACAAACAATTAGGAAATATAAAACTAAGCTTCTTTGTTGTTGGGGTTAATGGCCATTCAATGAGCCTTTAGTATGTAAATAGGGTTTTGCTTAACTCCATGGACTGCAAATAGGGTTTTGCATCATCACATCTTCTTGTTTCTTGCTTGCAATTTTGTCACACATTGTCCGATTTTGAGTTTACATTTTCTCTTTCAATTTAAATTCATCTTTGCTGGCCACAACATCCTTCACCCTTGAGTGTTAGATCTCAACGTGTTTTCTTACCACTCCCTCACACACACTCAAGTCTTGAATCTCTAGGTTTTCTGTTTCAGATGTTTGTTGCACTATTTCATAGCTTCATATGAGTTCTTGAATTTCATGAGTGTTCTTTTCTTTTTAAAAAGAAACGAATTTTGTATTTTAAATCAAAACCTAAATACTCAATGCCAACATGAATTTTGAATTACATAATACTACAAACACATTCCATCACACCCAAACGTCAAGGACCAAAAGAGATATTTACCCTTTTAATGACTTGCTAAATTACTCCCCTTTTTCCCCACTTTTGGTTTAGGCGTTGGTACCTGCTGCTTGTTTAAATTTGTTTTCATTATTAGTTCTCTTAATTTTACTTTCATTTATCTCGAAGGTAAATGGATTGTGCTAGAAATTGACTTTATTTTTATACCTAAATCAGTAAATCTAGCACCAAGTAACAAAAATCACAGTGCTAGGTTTTTGTATGAATAGGTTAACTTTTTTTAGCTTGATCATAGATTCACCATGGTTATTCTTTTGTGGGATATTTGGGGGAAGAGGAATAACAAAGAGTTTTAGAGGTATGAAGAGGAACCGTGGTGATGATTGGTCCTTAGTTGGTTCCATGTTTCTTTTTGGGTTTCTGTTCCAAAGACTATAAGTACTTATCCTCCAATAGTATCTTACTTTGTTGGAAACCCCTTCTTTAAAGTGGTTTTCCAAGCTTGTTTTTTTTTTTCTTCTTTTTTGTTTCCCTTCTATTCTTTCATTTTTTTTCTCAATGAAAGCAGTTGTTTCTATTAAAAAAACCAACCATACATTCATATGATCTTTTTTGATTTTCTGTGGGATATACTGCTAACTTGAGGCAGATATGAACCTCAATCCGATTACTATTTTTGGTACCACCTTATATTGGAATACCATATTCCTTTCTGTTCATGTCATTGAGCGGTGTGGCCTCTGTCTGCAATTGCCATCATATTATATGGATTAGTTTGTTATATCAGTAAGCATAGTTAAATGGACTGGTCGATTCTTTAATTTAATTAATTTATTTTATTTTTTTGCATCACTAATATCATCATCATTGGTTGATTTACTAGTCCAAAGTGCAAGTGGTTATCTTACATGTTTTGGAGGTTTCAATCATGGTTCAAAACTTAAATTATAGCTACCAAACTAAGATGCTAGAAATTTTAACTAGTATCCTTCACAAGATAGTACTTGCGATTATTCCATAGACTAGTCATGCACCATGTCGTTAAGAACCAAAGTTTTAAAATACCTGCTATTTTACAGTGAGTCGAGCTGGTATTCGATTCTGTCAATTGCTAATTTGACCTAGATGACAAAACTATACCCAAATGGGTTAGATTATGTTATGGCGTTATTCTTGCTGTTGTTTTTTTTTAACATATAAATTATCTAAATGAATTTATGGAACCATTATGATTGTCAATTGAATTCTAATATTTATCAATCAAGTGGGGTATTCAATTACGATCCTCTTCCATTGGCCTTTCAAATAGAGATCGTTTTCTTTGGTTTTTGGAGGTGTGCGCATTATCGTTGAATCTTTGGGAGGAGAGGAACAATAGTGTTTTGTGGTATGGAGAGGGACCTGGTGTGGTTTGTCCTTGCTGAGATTTCATGTTTATCTTTGGATTTCACTTTCAAAGACTTTTTGTAATTATTCCTTATGCAATATCTTATTGAGTTGAAAGCCCTTTCCTCAGTGGAATTTTTTGCAGGGTGGTATATTTTTTCTTTTTTTTTTTTTCTTAATGAAAGCTGTTGTTTCCGTAAAAAAGTCAGAACAATTAACTCAACCAAAATTCATTATATTAGTAGGATTAAGCACATCACTGTTAAAGAATAATAGGAACTCGTGGATAAACATCCAAAATGGTATGGATGTGATGAGGGCGCTAAGGGGGTGTCAACCTAGTTGAGATGCCTGGGTGCGCCTGCTGATTCTCCCTCTCCCCCTTTGCTCTTTGTATGTCCCTTATGTACTTTGAGCTTTATCTCTCTATTTTCATTATTAATAATATTGTGACTCGTTTCCTTCTTAAAAAAAACATCCAAAATGGTAGAAGTATGATCTGCTTTTATTAAAAAGGATTCTGCCTGCTTTGCGAGTATCCGTTTTAATTCAATTTACTTTGTTTGGGCCATACCTTCAGTTCCAAAGACGAAACCGTGTTTATAAGGAGGAGCAAAGGAAACTAAGGGCAGCTGAACGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAATTGTCATTCAGAGATTGAATAATGAAGAATGCATGGACATCCGTTGTTTCAAACACTTTTTTTTTGCTGACTTGTTAATGACATTCTATTGTCTTTTTCTGAATCCGGTACGAAATTCACAAGTCATGCAACTAAGCCAATTCATATATTTTTTTCATTGCTCCATCAGAAAGACAGCATTTTCTGCTTGAAGATGATGTTAACCATGTTATTGGTACTTAAATCCTATTTCCAAGTTCTGGTTTAATCAATAAGGCTATTCCTCAAATGTATCTTTCTAGGAAAGGGGTCATTATATGTTTCAATTTCTATCCGCGTATGAAGGGGAGCCTTAACGTATGTTAAACGTTTCGAGGGCCTCTTAACCAATACTGCTCACCTCTATGAATCTCAATCCTGAATATGGACATTGAATACAAGAGGAAATTATTTCATGGCAGAGGG AAAAACTAAAGTTTGCTACTAAATTGTATAGTTGCACTCAAAACCCGAAACCAAGAATCCATCAGATTTTGGGAACTTCCACTCTGCCTTAGCGGTTCGAACCACACCAAACAGACACAAGGAGACTCCGATTCAGTGCTAACCTCAAGAGATTCAGAAGTATGGCGTCAGGGTGGGGAATCACCGGAAACAAGGGCCGATGCTACGATTTCTGGATTGATTTTAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTTCTCTACTCCGTGAAGATTACCTCGAGTGCCTTCACCATTTCAAGGAGTTCCAAAGACGAAACCGTGTTTATAAGGAGGAGCAAAGGAAACTAAGGGCAGCTGAACGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAATTGTCATTCAGAGATTGAATAATGAAGAATGCATGGACATCCGTTGTTTCAAACACTTTTTTTTTGCTGACTTGTTAATGACATTCTATTGTCTTTTTCTGAATCCGGTACGAAATTCACAAGTCATGCAACTAAGCCAATTCATATATTTTTTTCATTGCTCCATCAGAAAGACAGCATTTTCTGCTTGAAGATGATGTTAACCATGTTATTGGTACTTAAATCCTATTTCCAAGTTCTGGTTTAATCAATAAGGCTATTCCTCAAATGTATCTTTCTAGGAAAGGGGTCATTATATGTTTCAATTTCTATCCGCGTATGAAGGGGAGCCTTAACGTATGTTAAACGTTTCGAGGGCCTCTTAACCAATACTGCTCACCTCTATGAATCTCAATCCTGAATATGGACATTGAATACAAGAGGAAATTATTTCATGGCAGAGGG ATGGCGTCAGGGTGGGGAATCACCGGAAACAAGGGCCGATGCTACGATTTCTGGATTGATTTTAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTTCTCTACTCCGTGAAGATTACCTCGAGTGCCTTCACCATTTCAAGGAGTTCCAAAGACGAAACCGTGTTTATAAGGAGGAGCAAAGGAAACTAAGGGCAGCTGAACGGGAGGCCAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAG MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKEEQRKLRAAEREAKEGKHVDAAHA* Homology
BLAST of CSPI04G00800 vs. ExPASy Swiss-Prot
Match: O82238 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana OX=3702 GN=At2g47690 PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 9.7e-34 Identity = 67/80 (83.75%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy Swiss-Prot
Match: Q9LZI6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana OX=3702 GN=At3g62790 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 9.7e-34 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy TrEMBL
Match: A0A0A0KTA7 (Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy TrEMBL
Match: A0A6J1DNW8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Momordica charantia OX=3673 GN=LOC111022414 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.5e-40 Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy TrEMBL
Match: A0A6J1KEK7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita maxima OX=3661 GN=LOC111493141 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy TrEMBL
Match: A0A6J1GA50 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moschata OX=3662 GN=LOC111452335 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of CSPI04G00800 vs. ExPASy TrEMBL
Match: A0A1S3BZL7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Cucumis melo OX=3656 GN=LOC103494774 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38 Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of CSPI04G00800 vs. NCBI nr
Match: XP_011652934.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus] >KGN52808.1 hypothetical protein Csa_015424 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 4.6e-41 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CSPI04G00800 vs. NCBI nr
Match: XP_022155272.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39 Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CSPI04G00800 vs. NCBI nr
Match: XP_038905985.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]) HSP 1 Score: 171.8 bits (434), Expect = 2.5e-39 Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CSPI04G00800 vs. NCBI nr
Match: XP_022948762.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata] >XP_022998534.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima] >KAG7036666.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38 Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of CSPI04G00800 vs. NCBI nr
Match: XP_008454345.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis melo]) HSP 1 Score: 168.3 bits (425), Expect = 2.8e-38 Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of CSPI04G00800 vs. TAIR 10
Match: AT2G47690.1 (NADH-ubiquinone oxidoreductase-related ) HSP 1 Score: 143.7 bits (361), Expect = 6.9e-35 Identity = 67/80 (83.75%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of CSPI04G00800 vs. TAIR 10
Match: AT3G62790.1 (NADH-ubiquinone oxidoreductase-related ) HSP 1 Score: 143.7 bits (361), Expect = 6.9e-35 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of CSPI04G00800 vs. TAIR 10
Match: AT2G47690.2 (NADH-ubiquinone oxidoreductase-related ) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-24 Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|