CSPI03G45720 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAGCAGAGAAACAAAAAAACAAAGAAGAAACAATGTCATGTTGGGAGCGTTTGAGGATGAAGATTTTGTCGAGAAAAAAAGAGGGAAATATCAACAACAAGAATGATACTAATATTACGTGCATGGGAGGTGAGACAAGTGGATTGAATAATCGGAGTGGGGGATTATTCAAGTATGACGCACTAAGCTACGCTAAAAATTTCGACGAGGGGTTGGCTAATGCTGACGGAGAAGGATCCTTTCGAAGTTTTTCTGCAAGATACGCTGTTCCTTCCAAACCCCCAGCTAAGAAGTTAGGATAA ATGAAGAAAGCAGAGAAACAAAAAAACAAAGAAGAAACAATGTCATGTTGGGAGCGTTTGAGGATGAAGATTTTGTCGAGAAAAAAAGAGGGAAATATCAACAACAAGAATGATACTAATATTACGTGCATGGGAGGTGAGACAAGTGGATTGAATAATCGGAGTGGGGGATTATTCAAGTATGACGCACTAAGCTACGCTAAAAATTTCGACGAGGGGTTGGCTAATGCTGACGGAGAAGGATCCTTTCGAAGTTTTTCTGCAAGATACGCTGTTCCTTCCAAACCCCCAGCTAAGAAGTTAGGATAA ATGAAGAAAGCAGAGAAACAAAAAAACAAAGAAGAAACAATGTCATGTTGGGAGCGTTTGAGGATGAAGATTTTGTCGAGAAAAAAAGAGGGAAATATCAACAACAAGAATGATACTAATATTACGTGCATGGGAGGTGAGACAAGTGGATTGAATAATCGGAGTGGGGGATTATTCAAGTATGACGCACTAAGCTACGCTAAAAATTTCGACGAGGGGTTGGCTAATGCTGACGGAGAAGGATCCTTTCGAAGTTTTTCTGCAAGATACGCTGTTCCTTCCAAACCCCCAGCTAAGAAGTTAGGATAA MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKKLG* Homology
BLAST of CSPI03G45720 vs. ExPASy TrEMBL
Match: A0A0A0LJR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 4.7e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CSPI03G45720 vs. ExPASy TrEMBL
Match: A0A1R3GHI4 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35304 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.3e-06 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of CSPI03G45720 vs. ExPASy TrEMBL
Match: A0A1R3FYB4 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_30223 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of CSPI03G45720 vs. ExPASy TrEMBL
Match: A0A059BR02 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02166 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.1e-05 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0
BLAST of CSPI03G45720 vs. ExPASy TrEMBL
Match: A0A7J8Y1V8 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_003904 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of CSPI03G45720 vs. NCBI nr
Match: KGN60281.1 (hypothetical protein Csa_002688 [Cucumis sativus]) HSP 1 Score: 203.4 bits (516), Expect = 9.6e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of CSPI03G45720 vs. NCBI nr
Match: KAG7024589.1 (hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.8 bits (203), Expect = 1.9e-12 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of CSPI03G45720 vs. NCBI nr
Match: KAG6591707.1 (hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11 Identity = 53/96 (55.21%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of CSPI03G45720 vs. NCBI nr
Match: KAG6608120.1 (hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11 Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of CSPI03G45720 vs. NCBI nr
Match: KAG2698660.1 (hypothetical protein I3760_07G160100 [Carya illinoinensis] >KAG6705100.1 hypothetical protein I3842_07G165100 [Carya illinoinensis]) HSP 1 Score: 59.7 bits (143), Expect = 1.7e-05 Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 0
BLAST of CSPI03G45720 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 9.1e-05 Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0
BLAST of CSPI03G45720 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04 Identity = 29/91 (31.87%), Postives = 46/91 (50.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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