CSPI03G43020 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G43020
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMagnesium transporter
LocationChr3: 36945571 .. 36946141 (-)
RNA-Seq ExpressionCSPI03G43020
SyntenyCSPI03G43020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCATCTTCTCCTGTAACTGGTTTTCCTCCTGCCAATTGGTTTCTTGCTTCTCCTACCCAAGAAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGACGACACTGAAGAACTTGAAATGCTGTTGTAGGTAATTATAATACATATAGTTTATGGTTATTCAATTTTCAAGAAGGTTTATAATGGAGGTTGCTTTGTTGCAGGCTTACTTTATGCAAATTGATGGTACATTGAACAAATTAACTAGAGTAAGTTAACATGTTTCCCTGCTTATCTAATTTATGTTGAAAAGAGCTAACCGAACAAAATATAAGGAATTCCGTAATACTTTTTTCTATAATAAAGTTGAAGAGATTTCTTAATGACTTGAGATTAATTTTATGCTAAAAACGAAAATTTTGTCATTGCTAAGAAGTGGTTTTAGATTAATAATTTTGTTTTGATTTTTGTTGGATTTGATTGAAATACACCCTTAATGAAACTGGCTGGGGATGCTTTTAGGAACCATCGGCATATGTAGGTGCAGGTGCCTTTCGACGTGTAATTATTGGAGTAATGAAGTTATGA

mRNA sequence

ATGAGCTCATCTTCTCCTGTAACTGGTTTTCCTCCTGCCAATTGGTTTCTTGCTTCTCCTACCCAAGAAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGACGACACTGAAGAACTTGAAATGCTGTTGTAGGTTTATAATGGAGGTTGCTTTGTTGCAGGCTTACTTTATGCAAATTGATGGTACATTGAACAAATTAACTAGAGAACCATCGGCATATGTAGGTGCAGGTGCCTTTCGACGTGTAATTATTGGAGTAATGAAGTTATGA

Coding sequence (CDS)

ATGAGCTCATCTTCTCCTGTAACTGGTTTTCCTCCTGCCAATTGGTTTCTTGCTTCTCCTACCCAAGAAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGACGACACTGAAGAACTTGAAATGCTGTTGTAGGTTTATAATGGAGGTTGCTTTGTTGCAGGCTTACTTTATGCAAATTGATGGTACATTGAACAAATTAACTAGAGAACCATCGGCATATGTAGGTGCAGGTGCCTTTCGACGTGTAATTATTGGAGTAATGAAGTTATGA

Protein sequence

MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEVALLQAYFMQIDGTLNKLTREPSAYVGAGAFRRVIIGVMKL*
Homology
[Close]
BLAST of CSPI03G43020 vs. ExPASy Swiss-Prot
Match: B8AJT9 (Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-I PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 3   SSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQID 62
           ++SPV+G    NWF ASPT   ++ +    +  T+   +     + E+  LL+AYFMQID
Sbjct: 224 AASPVSGSGGPNWFPASPTIGSKISRASRASAPTIHGNE---NDVEELEMLLEAYFMQID 283

Query: 63  GTLNKLT 69
           GTLNKLT
Sbjct: 284 GTLNKLT 287

[Close]
BLAST of CSPI03G43020 vs. ExPASy Swiss-Prot
Match: Q10D38 (Magnesium transporter MRS2-I OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-I PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0 

Query: 3   SSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQID 62
           ++SPV+G    NWF ASPT   ++ +    +  T+   +     + E+  LL+AYFMQID
Sbjct: 227 AASPVSGSGGPNWFPASPTIGSKISRASRASAPTIHGNE---NDVEELEMLLEAYFMQID 286

Query: 63  GTLNKLT 69
           GTLNKLT
Sbjct: 287 GTLNKLT 290

[Close]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match: A0A0A0LDG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860310 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 74/90 (82.22%), Postives = 74/90 (82.22%), Query Frame = 0 

Query: 1  MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEVALLQAYFMQI 60
          MSSSSPVTGFPPANWFLASPTQEEQVLQL               RFIMEVALLQAYFMQI
Sbjct: 1  MSSSSPVTGFPPANWFLASPTQEEQVLQL---------------RFIMEVALLQAYFMQI 60

Query: 61 DGTLNKLTREPSAYVGAGAFRRVIIGVMKL 91
          DGTLNKLT EPSAYVGAGAFRRVIIGVMKL
Sbjct: 61 DGTLNKLTTEPSAYVGAGAFRRVIIGVMKL 75

[Close]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match: A0A5D2HHA3 (Magnesium transporter OS=Gossypium darwinii OX=34276 GN=ES288_A01G028000v1 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.6e-06
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 226 LATSSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGHE---NDVEELEMLLEAYFMQ 285

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 286 IDGTLNKLTTFSLLHSNYVAAGIYRR 308

[Close]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match: A0A5D2M4E8 (Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_D01G026800v1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 227 LAASSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGDE---NDVEELEMLLEAYFMQ 286

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 287 IDGTLNKLTTFSLLHSNYVAAGIYRR 309

[Close]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match: A0A5D2RPV1 (Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_A01G033900v1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 226 LATSSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGDE---NDVEELEMLLEAYFMQ 285

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 286 IDGTLNKLTTFSLLHSNYVAAGIYRR 308

[Close]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match: A0A5D2M4I0 (Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_D01G026800v1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 226 LAASSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGDE---NDVEELEMLLEAYFMQ 285

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 286 IDGTLNKLTTFSLLHSNYVAAGIYRR 308

[Close]
BLAST of CSPI03G43020 vs. NCBI nr
Match: XP_004150432.1 (magnesium transporter MRS2-I [Cucumis sativus] >KGN61641.1 hypothetical protein Csa_006619 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           MSSSSPV+G  PANWF ASPT   ++ +    +R ++  ++     I E+  LL+AYFMQ
Sbjct: 234 MSSSSPVSGSGPANWFPASPTIGSKISR---ASRASVATVRGDEDDIEELEMLLEAYFMQ 293

Query: 61  IDGTLNKLT 69
           IDGTLNKLT
Sbjct: 294 IDGTLNKLT 299

[Close]
BLAST of CSPI03G43020 vs. NCBI nr
Match: TYH29637.1 (hypothetical protein ES288_A01G028000v1 [Gossypium darwinii])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 226 LATSSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGHE---NDVEELEMLLEAYFMQ 285

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 286 IDGTLNKLTTFSLLHSNYVAAGIYRR 308

[Close]
BLAST of CSPI03G43020 vs. NCBI nr
Match: TYK30183.1 (magnesium transporter CorA-like family protein [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           MSSSSPV+G  PANWF ASPT   ++ +    +R ++  ++     I E+  LL+AYFMQ
Sbjct: 234 MSSSSPVSGSGPANWFPASPTIGSKISR---ASRASVATVRGDEDDIEELEMLLEAYFMQ 293

Query: 61  IDGTLNKLT 69
           IDGTLNKLT
Sbjct: 294 IDGTLNKLT 299

[Close]
BLAST of CSPI03G43020 vs. NCBI nr
Match: ADN34078.1 (magnesium transporter [Cucumis melo subsp. melo])

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           MSSSSPV+G  PANWF ASPT   ++ +    +R ++  ++     I E+  LL+AYFMQ
Sbjct: 142 MSSSSPVSGSGPANWFPASPTIGSKISR---ASRASVATVRGDEDDIEELEMLLEAYFMQ 201

Query: 61  IDGTLNKLT 69
           IDGTLNKLT
Sbjct: 202 IDGTLNKLT 207

[Close]
BLAST of CSPI03G43020 vs. NCBI nr
Match: KAB2043551.1 (hypothetical protein ES319_D01G024900v1 [Gossypium barbadense] >KAG4160816.1 hypothetical protein ERO13_D01G022300v2 [Gossypium hirsutum] >TYG81725.1 hypothetical protein ES288_D01G028600v1 [Gossypium darwinii] >TYH86224.1 hypothetical protein ES332_D01G026800v1 [Gossypium tomentosum])

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-05
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 1   MSSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQ 60
           +++SSPV+G   ANW+  SPT   ++ +   G+  T+   +     + E+  LL+AYFMQ
Sbjct: 226 LAASSPVSGSGAANWYAVSPTIGSKISKASRGSIATIHGDE---NDVEELEMLLEAYFMQ 285

Query: 61  IDGTLNKLTREP---SAYVGAGAFRR 83
           IDGTLNKLT      S YV AG +RR
Sbjct: 286 IDGTLNKLTTFSLLHSNYVAAGIYRR 308

[Close]
BLAST of CSPI03G43020 vs. TAIR 10
Match: AT5G64560.1 (magnesium transporter 9 )

HSP 1 Score: 43.9 bits (102), Expect = 8.0e-05
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 2   SSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQI 61
           S+SSP++     NW+  SPT   ++ +    +R +L  +      + E+  LL+AYFMQI
Sbjct: 236 SASSPISSIGEPNWYTTSPTIGSKISR---ASRASLATVHGDENDVEELEMLLEAYFMQI 295

Query: 62  DGTLNKLT 69
           D TLN+LT
Sbjct: 296 DSTLNRLT 300

[Close]
BLAST of CSPI03G43020 vs. TAIR 10
Match: AT5G64560.2 (magnesium transporter 9 )

HSP 1 Score: 43.9 bits (102), Expect = 8.0e-05
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 2   SSSSPVTGFPPANWFLASPTQEEQVLQLYVGTRTTLKNLKCCCRFIMEV-ALLQAYFMQI 61
           S+SSP++     NW+  SPT   ++ +    +R +L  +      + E+  LL+AYFMQI
Sbjct: 236 SASSPISSIGEPNWYTTSPTIGSKISR---ASRASLATVHGDENDVEELEMLLEAYFMQI 295

Query: 62  DGTLNKLT 69
           D TLN+LT
Sbjct: 296 DSTLNRLT 300

The following BLAST results are available for this feature:
BLAST of CSPI03G43020 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8AJT91.0e-0443.28Magnesium transporter MRS2-I OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-I PE... [more]
Q10D381.0e-0443.28Magnesium transporter MRS2-I OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-I ... [more]
BLAST of CSPI03G43020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDG01.2e-2982.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860310 PE=4 SV=1[more]
A0A5D2HHA39.6e-0643.02Magnesium transporter OS=Gossypium darwinii OX=34276 GN=ES288_A01G028000v1 PE=3 ... [more]
A0A5D2M4E81.3e-0543.02Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_D01G026800v1 PE=... [more]
A0A5D2RPV11.3e-0543.02Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_A01G033900v1 PE=... [more]
A0A5D2M4I01.3e-0543.02Magnesium transporter OS=Gossypium tomentosum OX=34277 GN=ES332_D01G026800v1 PE=... [more]
BLAST of CSPI03G43020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150432.12.0e-0552.17magnesium transporter MRS2-I [Cucumis sativus] >KGN61641.1 hypothetical protein ... [more]
TYH29637.12.0e-0543.02hypothetical protein ES288_A01G028000v1 [Gossypium darwinii][more]
TYK30183.12.0e-0552.17magnesium transporter CorA-like family protein [Cucumis melo var. makuwa][more]
ADN34078.12.0e-0552.17magnesium transporter [Cucumis melo subsp. melo][more]
KAB2043551.12.6e-0543.02hypothetical protein ES319_D01G024900v1 [Gossypium barbadense] >KAG4160816.1 hyp... [more]
BLAST of CSPI03G43020 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64560.18.0e-0538.24magnesium transporter 9 [more]
AT5G64560.28.0e-0538.24magnesium transporter 9 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G43020.1CSPI03G43020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015693 magnesium ion transport
molecular_function GO:0046873 metal ion transmembrane transporter activity